RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ARMS2P0C7Q2 107 aa10.22□□□□□ -0.77
USB1-203ENST00000539737 CRYBA4P53673 196 aa10.22□□□□□ -0.77
USB1-203ENST00000539737 KRTAP10-1P60331 282 aa10.22□□□□□ -0.77
USB1-203ENST00000539737 PCNPQ8WW12 178 aaKnown RBP10.22□□□□□ -0.77
USB1-203ENST00000539737 VSIG2Q96IQ7 327 aa10.22□□□□□ -0.77
USB1-203ENST00000539737 PARLQ9H300 379 aa10.22□□□□□ -0.77
USB1-203ENST00000539737 PHLDA3Q9Y5J5 127 aa10.22□□□□□ -0.77
USB1-203ENST00000539737 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
USB1-203ENST00000539737 A0A096LPF7 62 aa10.21□□□□□ -0.77
USB1-203ENST00000539737 A8MWV9 139 aa10.21□□□□□ -0.77
USB1-203ENST00000539737 RPL19P84098 196 aaKnown RBP10.21□□□□□ -0.77
USB1-203ENST00000539737 MRPL23Q16540 153 aaKnown RBP10.21□□□□□ -0.77
USB1-203ENST00000539737 CFAP126Q5VTH2 177 aa10.21□□□□□ -0.77
USB1-203ENST00000539737 ZFP82Q8N141 532 aa10.21□□□□□ -0.77
USB1-203ENST00000539737 P01737 135 aa10.2□□□□□ -0.78
USB1-203ENST00000539737 RPS20P60866 119 aaKnown RBP10.2□□□□□ -0.78
USB1-203ENST00000539737 XKRY2A2RUG3 117 aa10.19□□□□□ -0.78
USB1-203ENST00000539737 C19orf71A6NCJ1 209 aa10.19□□□□□ -0.78
USB1-203ENST00000539737 RHODO00212 210 aa10.19□□□□□ -0.78
USB1-203ENST00000539737 SIVA1O15304 175 aa10.19□□□□□ -0.78
USB1-203ENST00000539737 GATA1P15976 413 aaPredicted RBP10.19□□□□□ -0.78
USB1-203ENST00000539737 CEBPGP53567 150 aa10.19□□□□□ -0.78
USB1-203ENST00000539737 ZFP2Q6ZN57 461 aa10.19□□□□□ -0.78
USB1-203ENST00000539737 TRAV9-2A0A087WT02 112 aa10.18□□□□□ -0.78
USB1-203ENST00000539737 M0R381 172 aa10.18□□□□□ -0.78
USB1-203ENST00000539737 OR5AL1P0C617 328 aa10.18□□□□□ -0.78
USB1-203ENST00000539737 RHOHQ15669 191 aa10.18□□□□□ -0.78
USB1-203ENST00000539737 NEGR1Q7Z3B1 354 aa10.18□□□□□ -0.78
USB1-203ENST00000539737 OR2D3Q8NGH3 330 aa10.18□□□□□ -0.78
USB1-203ENST00000539737 TRBV6-4A0A1B0GX49 114 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 EREGO14944 169 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 SNAI2O43623 268 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 NXPH4O95158 308 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 GYPEP15421 78 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 SRIP30626 198 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 DMRTA1Q5VZB9 504 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 SMIM7Q9BQ49 75 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 PRADC1Q9BSG0 188 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 LY96Q9Y6Y9 160 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 DNAH8Q96JB1 4490 aa10.17□□□□□ -0.78
USB1-203ENST00000539737 K7EN84 100 aa10.16□□□□□ -0.78
USB1-203ENST00000539737 K7EQD1 137 aa10.16□□□□□ -0.78
USB1-203ENST00000539737 SRP19P09132 144 aaKnown RBP10.16□□□□□ -0.78
USB1-203ENST00000539737 RAB14P61106 215 aa10.16□□□□□ -0.78
USB1-203ENST00000539737 PEA15Q15121 130 aa10.16□□□□□ -0.78
USB1-203ENST00000539737 SH2D6Q7Z4S9 175 aa10.16□□□□□ -0.78
USB1-203ENST00000539737 SFRP2Q96HF1 295 aa10.16□□□□□ -0.78
USB1-203ENST00000539737 SSBP4Q9BWG4 385 aaPredicted RBP10.16□□□□□ -0.78
USB1-203ENST00000539737 SMDT1Q9H4I9 107 aa10.16□□□□□ -0.78
USB1-203ENST00000539737 IGHV3-73A0A0B4J1V6 119 aa10.15□□□□□ -0.78
USB1-203ENST00000539737 ZNF727A8MUV8 499 aa10.15□□□□□ -0.78
USB1-203ENST00000539737 SPANXN1Q5VSR9 72 aa10.15□□□□□ -0.78
USB1-203ENST00000539737 SLC25A29Q8N8R3 303 aa10.15□□□□□ -0.78
USB1-203ENST00000539737 FER1L6-AS1Q8NA97 138 aa10.15□□□□□ -0.78
USB1-203ENST00000539737 OR10AG1Q8NH19 301 aa10.15□□□□□ -0.78
USB1-203ENST00000539737 OCC1Q8TAD7 63 aa10.15□□□□□ -0.78
USB1-203ENST00000539737 RPP21Q9H633 154 aaKnown RBP10.15□□□□□ -0.78
USB1-203ENST00000539737 FAM74A3Q4VXF1 159 aa10.14□□□□□ -0.79
USB1-203ENST00000539737 FAM74A4Q5TZK3 123 aa10.14□□□□□ -0.79
USB1-203ENST00000539737 UFSP1Q6NVU6 142 aa10.14□□□□□ -0.79
USB1-203ENST00000539737 NFE4Q86UQ8 179 aa10.14□□□□□ -0.79
USB1-203ENST00000539737 NUDT10Q8NFP7 164 aa10.14□□□□□ -0.79
USB1-203ENST00000539737 NUDT11Q96G61 164 aa10.14□□□□□ -0.79
USB1-203ENST00000539737 TPPP3Q9BW30 176 aa10.14□□□□□ -0.79
USB1-203ENST00000539737 IGLC6P0CF74 106 aa10.13□□□□□ -0.79
USB1-203ENST00000539737 GZMBP10144 247 aa10.13□□□□□ -0.79
USB1-203ENST00000539737 CACNG7P62955 275 aa10.13□□□□□ -0.79
USB1-203ENST00000539737 LYPD5Q6UWN5 251 aa10.13□□□□□ -0.79
USB1-203ENST00000539737 FAM231DQ6ZW35 169 aa10.13□□□□□ -0.79
USB1-203ENST00000539737 FRZBQ92765 325 aa10.13□□□□□ -0.79
USB1-203ENST00000539737 AP1S3Q96PC3 154 aa10.13□□□□□ -0.79
USB1-203ENST00000539737 SAMD10Q9BYL1 202 aa10.13□□□□□ -0.79
USB1-203ENST00000539737 RNASE7Q9H1E1 156 aaKnown RBP10.13□□□□□ -0.79
USB1-203ENST00000539737 JPT2Q9H910 190 aa10.13□□□□□ -0.79
USB1-203ENST00000539737 A0A087WWL8 130 aa10.12□□□□□ -0.79
USB1-203ENST00000539737 F2Z2F3 143 aa10.12□□□□□ -0.79
USB1-203ENST00000539737 K7EP13 123 aa10.12□□□□□ -0.79
USB1-203ENST00000539737 EVI2AP22794 236 aa10.12□□□□□ -0.79
USB1-203ENST00000539737 LINC01551Q86U37 167 aa10.12□□□□□ -0.79
USB1-203ENST00000539737 A0A087WTM6 91 aa10.11□□□□□ -0.79
USB1-203ENST00000539737 LOC100131303A0A0U1RQF7 123 aa10.11□□□□□ -0.79
USB1-203ENST00000539737 GATCO43716 136 aaKnown RBP10.11□□□□□ -0.79
USB1-203ENST00000539737 ERVFC1-1P60608 527 aa10.11□□□□□ -0.79
USB1-203ENST00000539737 MUC21A0A0G2JKD1 596 aa10.1□□□□□ -0.79
USB1-203ENST00000539737 MUC21A0A140T8X8 626 aa10.1□□□□□ -0.79
USB1-203ENST00000539737 CRYGDP07320 174 aa10.1□□□□□ -0.79
USB1-203ENST00000539737 SMIM17P0DL12 118 aa10.1□□□□□ -0.79
USB1-203ENST00000539737 CTRLP40313 264 aa10.1□□□□□ -0.79
USB1-203ENST00000539737 TIRAPP58753 221 aa10.1□□□□□ -0.79
USB1-203ENST00000539737 CT83Q5H943 113 aa10.1□□□□□ -0.79
USB1-203ENST00000539737 C9JQL5 133 aa10.09□□□□□ -0.79
USB1-203ENST00000539737 SRSF3P84103 164 aaKnown RBP10.09□□□□□ -0.79
USB1-203ENST00000539737 ZNF56Q15929 161 aa10.09□□□□□ -0.79
USB1-203ENST00000539737 TMEM241Q24JQ0 296 aa10.09□□□□□ -0.79
USB1-203ENST00000539737 CLLU1Q5K131 121 aa10.09□□□□□ -0.79
USB1-203ENST00000539737 C10orf126Q8N4M7 172 aa10.09□□□□□ -0.79
USB1-203ENST00000539737 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
USB1-203ENST00000539737 NAT8Q9UHE5 227 aa10.09□□□□□ -0.79
USB1-203ENST00000539737 UBR4Q5T4S7 5183 aa10.08□□□□□ -0.8
USB1-203ENST00000539737 LRP1Q07954 4544 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms