RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 H3BMG7 143 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 RPL39LQ96EH5 51 aaKnown RBP5.03□□□□□ -1.6
LSAMP-207ENST00000539563 H0YGX0 51 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 Q6ZQT7 251 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 HHLA3Q9XRX5 114 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 IGHV4OR15-8A0A075B7B6 117 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 A0A087WW49 117 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 CTSGP08311 255 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 MYCNOSP40205 109 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 ATP5G1P05496 136 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 BLCAPP62952 87 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 ZNF503Q96F45 646 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 ETDCA0A1B0GVM5 59 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 RPL18AQ02543 176 aaKnown RBP5.02□□□□□ -1.61
LSAMP-207ENST00000539563 PIFOQ8TCI5 191 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 IGKV1-17P01599 117 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 COA6Q5JTJ3 125 aaKnown RBP5.02□□□□□ -1.61
LSAMP-207ENST00000539563 ASPHD1Q5U4P2 390 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 C5orf38Q86SI9 138 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 FAM167A-AS1Q96KT0 104 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 Q9HAA7 133 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 DEFB105AQ8NG35 78 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 TEX22C9J3V5 150 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 ZFP2Q6ZN57 461 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 TRANK1O15050 2925 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 NCOR1O75376 2440 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 GAGE12HA6NDE8 117 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 FUSP35637 526 aaKnown RBP eCLIP5.02□□□□□ -1.61
LSAMP-207ENST00000539563 TM2D2Q9BX73 214 aa5.02□□□□□ -1.61
LSAMP-207ENST00000539563 K7ERJ3 54 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 PLXNB1O43157 2135 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 IGHG2P01859 326 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 INSL3P51460 131 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 ETDBQ3ZM63 59 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 COX7B2Q8TF08 81 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 TOMM6Q96B49 74 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 CAMK2N2Q96S95 79 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 IGLV2-23P01705 113 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 AMTNQ6UX39 209 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 ODF3L1Q8IXM7 274 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 CXCL5P42830 114 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 TRAV4A0A0B4J268 109 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 TINCRA0A1B0GVN0 87 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 CTRLP40313 264 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 SEM1Q6ZVN7 128 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 C15orf53Q8NAA6 179 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 SPRY4Q9C004 299 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 IGLV1-47P01700 117 aa5.01□□□□□ -1.61
LSAMP-207ENST00000539563 PATE2Q6UY27 113 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 SND1-IT1Q9HBX3 110 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 BAALCQ8WXS3 180 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 NDUFS5O43920 106 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 NPSP0C0P6 89 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 LYPD6Q86Y78 171 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 RAI1Q7Z5J4 1906 aaPredicted RBP5□□□□□ -1.61
LSAMP-207ENST00000539563 KIR2DL5BA0A0G2JN68 375 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 KIR2DL5BA0A0G2JPC4 375 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 KIR2DL5AQ8N109 375 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 RIF1Q5UIP0 2472 aaKnown RBP5□□□□□ -1.61
LSAMP-207ENST00000539563 GVINP1Q7Z2Y8 2422 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 PCP2Q8IVA1 136 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 Q8N1Y9 231 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 KLK5Q9Y337 293 aaPredicted RBP5□□□□□ -1.61
LSAMP-207ENST00000539563 GATA1P15976 413 aaPredicted RBP5□□□□□ -1.61
LSAMP-207ENST00000539563 Q8N7P7 452 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 COL4A3Q01955 1670 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 HIST2H2BCQ6DN03 193 aa5□□□□□ -1.61
LSAMP-207ENST00000539563 DEFB125Q8N687 156 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 TMEM263Q8WUH6 116 aaKnown RBP4.99□□□□□ -1.61
LSAMP-207ENST00000539563 SIRPDQ9H106 197 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 HIGD1BQ9P298 99 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 IGLV2-14P01704 120 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 TIRAPP58753 221 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 E9PLD3 99 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 TIMM17AQ99595 171 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 NTN5Q8WTR8 489 aaPredicted RBP4.99□□□□□ -1.61
LSAMP-207ENST00000539563 GTSF1Q8WW33 167 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 NOTCH3Q9UM47 2321 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 A0A0B4J2C4 111 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 TMEM258P61165 79 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 CRYBA4P53673 196 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 A6NDX4 124 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 C11orf86A6NJI1 115 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 NDUFA1O15239 70 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 MUSTN1Q8IVN3 82 aa4.99□□□□□ -1.61
LSAMP-207ENST00000539563 SPENQ96T58 3664 aaKnown RBP4.99□□□□□ -1.61
LSAMP-207ENST00000539563 OPRPNQ99935 248 aaPredicted RBP4.99□□□□□ -1.61
LSAMP-207ENST00000539563 ZFP36P26651 326 aaKnown RBP4.98□□□□□ -1.61
LSAMP-207ENST00000539563 ODF3Q96PU9 254 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 TNCP24821 2201 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 TECTAO75443 2155 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 TRBV10-1A0A0K0K1A3 114 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 LOXL1Q08397 574 aaPredicted RBP4.98□□□□□ -1.61
LSAMP-207ENST00000539563 MAJINQ3KP22 176 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 DSCAML1Q8TD84 2053 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 CLPSL1A2RUU4 121 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 IL17DQ8TAD2 202 aa4.98□□□□□ -1.61
LSAMP-207ENST00000539563 F8W735 103 aaPredicted RBP4.98□□□□□ -1.61
LSAMP-207ENST00000539563 FSTL3O95633 263 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms