RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TRBV6-5A0A0K0K1A5 114 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 K7EMT4 169 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 PF4V1P10720 104 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 ID1P41134 155 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 SMCPP49901 116 aaPredicted RBP7.23□□□□□ -1.25
CDH13-204ENST00000539548 INSL3P51460 131 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 LCNL1Q6ZST4 164 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 KIR2DL4Q99706 377 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 A6NDX4 124 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 LGALS9O00182 355 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 APOMO95445 188 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 IGLV1-40P01703 118 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 FOXI1Q12951 378 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 LYRM7Q5U5X0 104 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 NDUFA11Q86Y39 141 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 SLC25A29Q8N8R3 303 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 C1QTNF4Q9BXJ3 329 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 JPT2Q9H910 190 aa7.23□□□□□ -1.25
CDH13-204ENST00000539548 DAZ1Q9NQZ3 744 aaKnown RBP7.23□□□□□ -1.25
CDH13-204ENST00000539548 SPTA1P02549 2419 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 IGKV3-7A0A075B6H7 116 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 IGHV4-39P01824 125 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 PSMB2P49721 201 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 RPL39P62891 51 aaKnown RBP7.22□□□□□ -1.25
CDH13-204ENST00000539548 LY6EQ16553 131 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 ZNF876PQ49A33 203 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 LOC107984156A0A0G2JMH3 177 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 SDHAF1A6NFY7 115 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 F5H697 171 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 IGHV3-30P01768 117 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 IGHV3-30-5P0DP03 117 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 ARL17AQ8IVW1 177 aa7.22□□□□□ -1.25
CDH13-204ENST00000539548 NAV2Q8IVL1 2488 aa7.21□□□□□ -1.25
CDH13-204ENST00000539548 A0A087WWL8 130 aa7.21□□□□□ -1.26
CDH13-204ENST00000539548 EMP1P54849 157 aa7.21□□□□□ -1.26
CDH13-204ENST00000539548 ZNRF2Q8NHG8 242 aa7.21□□□□□ -1.26
CDH13-204ENST00000539548 DCANP1Q8TF63 244 aa7.21□□□□□ -1.26
CDH13-204ENST00000539548 C9orf85Q96MD7 179 aa7.21□□□□□ -1.26
CDH13-204ENST00000539548 SPTBN1Q01082 2364 aaKnown RBP7.21□□□□□ -1.26
CDH13-204ENST00000539548 TRBV20-1A0A075B6N2 111 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 TRAV12-3A0A0B4J271 114 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 H3BUX3 64 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 SRD5A1P18405 259 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 TSPEAR-AS2P59090 65 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 BLCAPP62952 87 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 TMEM170BQ5T4T1 132 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 NFE4Q86UQ8 179 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 ODF3Q96PU9 254 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 AMELXQ99217 191 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 NBASA2RRP1 2371 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 ABCA2Q9BZC7 2435 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 IGHV3-16A0A0C4DH30 117 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 CFC1BP0CG36 223 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 CFC1P0CG37 223 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 IGHV4-38-2P0DP08 117 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 CFHR3Q02985 330 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 Q6ZS46 218 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 SBSPONQ8IVN8 264 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 MYO18BQ8IUG5 2567 aa7.2□□□□□ -1.26
CDH13-204ENST00000539548 CFAP46Q8IYW2 2715 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 J3QQQ9 107 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 PRB1P04280 392 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 RHOHQ15669 191 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 CLEC2AQ6UVW9 174 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 SYT8Q8NBV8 401 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 ZNF462Q96JM2 2506 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 IGHV4-61A0A0C4DH41 118 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 M0QY20 66 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 TCL1BO95988 128 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 NSUN5P1Q3KNT7 163 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 C10orf126Q8N4M7 172 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 DEFB104AQ8WTQ1 72 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 PIMREGQ9BSJ6 248 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 CDIP1Q9H305 208 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 PRO1854Q9UHT4 67 aa7.19□□□□□ -1.26
CDH13-204ENST00000539548 A0A1B0GV72 72 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 C19orf84I3L1E1 186 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 LEPROTO15243 131 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 LGALS3P17931 250 aaKnown RBP7.18□□□□□ -1.26
CDH13-204ENST00000539548 EDN2P20800 178 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 SFTA2Q6UW10 78 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 TEN1Q86WV5 123 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 ZNF418Q8TF45 676 aaPredicted RBP7.18□□□□□ -1.26
CDH13-204ENST00000539548 PPDPFLQ8WWR9 84 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 WFDC12Q8WWY7 111 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 VCX2Q9H322 139 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 ZNF580Q9UK33 172 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 TCTEX1D4Q5JR98 221 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 TRPT1Q86TN4 253 aaKnown RBP7.18□□□□□ -1.26
CDH13-204ENST00000539548 C10orf105Q8TEF2 133 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 CARD19Q96LW7 228 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 MDFICQ9P1T7 246 aa7.18□□□□□ -1.26
CDH13-204ENST00000539548 ZNF256Q9Y2P7 627 aaPredicted RBP7.18□□□□□ -1.26
CDH13-204ENST00000539548 TENM4Q6N022 2769 aa7.17□□□□□ -1.26
CDH13-204ENST00000539548 HIVEP3Q5T1R4 2406 aa7.17□□□□□ -1.26
CDH13-204ENST00000539548 A0A0J9YX75 114 aa7.17□□□□□ -1.26
CDH13-204ENST00000539548 TMEM223A0PJW6 202 aa7.17□□□□□ -1.26
CDH13-204ENST00000539548 P0DMU3 169 aa7.17□□□□□ -1.26
CDH13-204ENST00000539548 FAM231AP0DMU4 169 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms