RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 LINC00315P59091 139 aa6.58□□□□□ -1.36
RTN4IP1-204ENST00000539449 ZNF415Q09FC8 603 aa6.58□□□□□ -1.36
RTN4IP1-204ENST00000539449 RNASE8Q8TDE3 154 aaKnown RBP6.58□□□□□ -1.36
RTN4IP1-204ENST00000539449 RCHY1Q96PM5 261 aa6.58□□□□□ -1.36
RTN4IP1-204ENST00000539449 SAMD10Q9BYL1 202 aa6.58□□□□□ -1.36
RTN4IP1-204ENST00000539449 RETNQ9HD89 108 aa6.58□□□□□ -1.36
RTN4IP1-204ENST00000539449 MRPL16Q9NX20 251 aaKnown RBP6.58□□□□□ -1.36
RTN4IP1-204ENST00000539449 KIF25-AS1Q9Y6Z4 181 aa6.58□□□□□ -1.36
RTN4IP1-204ENST00000539449 HUWE1Q7Z6Z7 4374 aaKnown RBP6.58□□□□□ -1.36
RTN4IP1-204ENST00000539449 KIAA1109Q2LD37 5005 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 A0A1B0GW15 77 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 SMKR1H3BMG3 65 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST1H2BKO60814 126 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HLA-DQA1P01909 254 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST1H2BJP06899 126 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 GATA1P15976 413 aaPredicted RBP6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 RAB4AP20338 218 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST1H2BOP23527 126 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST1H2BBP33778 126 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST1H2BDP58876 126 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST1H2BCP62807 126 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST2H2BEQ16778 126 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 RRN3P1Q2M238 152 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 COX19Q49B96 90 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 MRPL51Q4U2R6 128 aaKnown RBP6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 FAM104BQ5XKR9 115 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 C14orf178Q8N769 122 aaPredicted RBP6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST1H2BHQ93079 126 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST1H2BNQ99877 126 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 HIST1H2BMQ99879 126 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 TMEM191AQ9H0A3 160 aa6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 ZMAT5Q9UDW3 170 aaKnown RBP6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 PLECQ15149 4684 aaKnown RBP6.57□□□□□ -1.36
RTN4IP1-204ENST00000539449 A0A087WWL8 130 aa6.56□□□□□ -1.36
RTN4IP1-204ENST00000539449 UBE2CO00762 179 aa6.56□□□□□ -1.36
RTN4IP1-204ENST00000539449 MT-ND6P03923 174 aa6.56□□□□□ -1.36
RTN4IP1-204ENST00000539449 CRYGDP07320 174 aa6.56□□□□□ -1.36
RTN4IP1-204ENST00000539449 ZNF876PQ49A33 203 aa6.56□□□□□ -1.36
RTN4IP1-204ENST00000539449 Q6ZTI0 123 aa6.56□□□□□ -1.36
RTN4IP1-204ENST00000539449 POM121L12Q8N7R1 296 aa6.56□□□□□ -1.36
RTN4IP1-204ENST00000539449 OR11H2Q8NH07 326 aa6.56□□□□□ -1.36
RTN4IP1-204ENST00000539449 TMEM263Q8WUH6 116 aaKnown RBP6.56□□□□□ -1.36
RTN4IP1-204ENST00000539449 RNF183Q96D59 192 aa6.56□□□□□ -1.36
RTN4IP1-204ENST00000539449 M0R2P5 195 aa6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 DEFB4AO15263 64 aa6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 NCR2O95944 276 aa6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 S100A8P05109 93 aa6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 SRIP30626 198 aa6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 IQCJQ1A5X6 159 aa6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 C16orf74Q96GX8 76 aa6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 OVOL2Q9BRP0 275 aa6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 ALKBH7Q9BT30 221 aaPredicted RBP6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 SPXQ9BT56 116 aa6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 NOP10Q9NPE3 64 aaKnown RBP6.55□□□□□ -1.36
RTN4IP1-204ENST00000539449 ABCA13Q86UQ4 5058 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 TRGV1A0A0A0MS02 117 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 IGHV3-73A0A0B4J1V6 119 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 TRAV26-2A0A0B4J265 109 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 IGHV4-28A0A0C4DH34 117 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 RS1O15537 224 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 NUPR1O60356 82 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 MGPP08493 103 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 EMP1P54849 157 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 NDUFA6P56556 154 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 RAB5BP61020 215 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 Q6ZSN1 163 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 Q6ZWC4 215 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 SBSPONQ8IVN8 264 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 Q8NAQ8 132 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 SYT8Q8NBV8 401 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 PTH2Q96A98 100 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 PGPEP1Q9NXJ5 209 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 HECTD4Q9Y4D8 3996 aa6.54□□□□□ -1.36
RTN4IP1-204ENST00000539449 GAGE12BA1L429 117 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 D6R8Y8 96 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 GAGE7O76087 117 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 NPYP01303 97 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 GAGE12FP0CL80 117 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 GAGE12GP0CL81 117 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 GAGE12IP0CL82 117 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 LINC00310P59036 64 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 DAZ2Q13117 558 aaKnown RBP6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 CFAP126Q5VTH2 177 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 UFSP1Q6NVU6 142 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 C18orf32Q8TCD1 76 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 RASL10AQ92737 203 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 AP1S3Q96PC3 154 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 DPH3P1Q9H4G8 78 aa6.53□□□□□ -1.36
RTN4IP1-204ENST00000539449 SMIM9A6NGZ8 99 aa6.52□□□□□ -1.37
RTN4IP1-204ENST00000539449 IGHV3-53P01767 116 aa6.52□□□□□ -1.37
RTN4IP1-204ENST00000539449 FAM74A4Q5TZK3 123 aa6.52□□□□□ -1.37
RTN4IP1-204ENST00000539449 SUMO4Q6EEV6 95 aa6.52□□□□□ -1.37
RTN4IP1-204ENST00000539449 SMIM15Q7Z3B0 74 aa6.52□□□□□ -1.37
RTN4IP1-204ENST00000539449 RPL39LQ96EH5 51 aaKnown RBP6.52□□□□□ -1.37
RTN4IP1-204ENST00000539449 URB1-AS1Q96HZ7 61 aa6.52□□□□□ -1.37
RTN4IP1-204ENST00000539449 PRELID3AQ96N28 172 aa6.52□□□□□ -1.37
RTN4IP1-204ENST00000539449 Q9UF83 564 aa6.52□□□□□ -1.37
RTN4IP1-204ENST00000539449 CELA1Q9UNI1 258 aa6.52□□□□□ -1.37
RTN4IP1-204ENST00000539449 CKS2P33552 79 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms