RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 GCGP01275 180 aa9.12□□□□□ -0.95
SMARCA4-206ENST00000538456 CYB561D1Q8N8Q1 229 aa9.12□□□□□ -0.95
SMARCA4-206ENST00000538456 LYPD6BQ8NI32 183 aa9.12□□□□□ -0.95
SMARCA4-206ENST00000538456 FAM213BQ8TBF2 198 aa9.12□□□□□ -0.95
SMARCA4-206ENST00000538456 PARLQ9H300 379 aa9.12□□□□□ -0.95
SMARCA4-206ENST00000538456 A0A087WWC5 75 aa9.11□□□□□ -0.95
SMARCA4-206ENST00000538456 HMGB3O15347 200 aaKnown RBP9.11□□□□□ -0.95
SMARCA4-206ENST00000538456 RNASE3P12724 160 aaKnown RBP9.11□□□□□ -0.95
SMARCA4-206ENST00000538456 SLC7A5P1Q8MH63 180 aa9.11□□□□□ -0.95
SMARCA4-206ENST00000538456 C14orf178Q8N769 122 aaPredicted RBP9.11□□□□□ -0.95
SMARCA4-206ENST00000538456 UBE2WQ96B02 151 aa9.11□□□□□ -0.95
SMARCA4-206ENST00000538456 SAMD10Q9BYL1 202 aa9.11□□□□□ -0.95
SMARCA4-206ENST00000538456 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
SMARCA4-206ENST00000538456 FHITP49789 147 aa9.1□□□□□ -0.95
SMARCA4-206ENST00000538456 PQLC2Q6ZP29 291 aa9.1□□□□□ -0.95
SMARCA4-206ENST00000538456 COMMD7Q86VX2 200 aa9.1□□□□□ -0.95
SMARCA4-206ENST00000538456 NIT1Q86X76 327 aa9.1□□□□□ -0.95
SMARCA4-206ENST00000538456 PTH2Q96A98 100 aa9.1□□□□□ -0.95
SMARCA4-206ENST00000538456 A0A1W2PPV4 95 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 A8MWV9 139 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 IGLV2-11P01706 119 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 H2AFB1P0C5Y9 115 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 RAB2AP61019 212 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 ZFP2Q6ZN57 461 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 ARL6IP6Q8N6S5 226 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 OR10G9Q8NGN4 311 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 OR10G7Q8NGN6 311 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 MBD3L1Q8WWY6 194 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 DAZAP1Q96EP5 407 aaKnown RBP9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 JPT2Q9H910 190 aa9.09□□□□□ -0.95
SMARCA4-206ENST00000538456 A0A087WX48 190 aa9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 TRAV1-1A0A0B4J248 108 aa9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 CTXND1A0A1B0GTU2 59 aa9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 RAB19A4D1S5 217 aa9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 TEX46H3BTG2 121 aa9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 TCRAP04437 139 aa9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 S100A4P26447 101 aaKnown RBP9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 FGF8P55075 233 aaPredicted RBP9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 ZNF726P1Q15940 193 aa9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 LINC00479Q96M42 142 aa9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 ACTR3CQ9C0K3 210 aaPredicted RBP9.08□□□□□ -0.96
SMARCA4-206ENST00000538456 SERTM2A0A1B0GWG4 89 aa9.07□□□□□ -0.96
SMARCA4-206ENST00000538456 K7EQM0 130 aa9.07□□□□□ -0.96
SMARCA4-206ENST00000538456 ARL14EPLP0DKL9 152 aa9.07□□□□□ -0.96
SMARCA4-206ENST00000538456 CDC34P49427 236 aaPredicted RBP9.07□□□□□ -0.96
SMARCA4-206ENST00000538456 SMUG1Q53HV7 270 aa9.07□□□□□ -0.96
SMARCA4-206ENST00000538456 PRNTQ86SH4 94 aa9.07□□□□□ -0.96
SMARCA4-206ENST00000538456 PSG8Q9UQ74 426 aa9.07□□□□□ -0.96
SMARCA4-206ENST00000538456 MAP1LC3B2A6NCE7 125 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 C14orf177Q52M58 125 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 FAM74A4Q5TZK3 123 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 DMRTA1Q5VZB9 504 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 UFSP1Q6NVU6 142 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 KCNIP4Q6PIL6 250 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 C5orf17Q8NAS9 161 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 SFT2D1Q8WV19 159 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 RAB24Q969Q5 203 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 MAP1LC3BQ9GZQ8 125 aa9.06□□□□□ -0.96
SMARCA4-206ENST00000538456 IGKV3D-20A0A0C4DH25 116 aa9.05□□□□□ -0.96
SMARCA4-206ENST00000538456 ASIPP42127 132 aa9.05□□□□□ -0.96
SMARCA4-206ENST00000538456 FLI1Q01543 452 aaPredicted RBP9.05□□□□□ -0.96
SMARCA4-206ENST00000538456 ATRAIDQ6UW56 229 aa9.05□□□□□ -0.96
SMARCA4-206ENST00000538456 UQCC3Q6UW78 93 aa9.05□□□□□ -0.96
SMARCA4-206ENST00000538456 C1orf43Q9BWL3 253 aa9.05□□□□□ -0.96
SMARCA4-206ENST00000538456 LRP2P98164 4655 aa9.04□□□□□ -0.96
SMARCA4-206ENST00000538456 H3BVH4 76 aa9.04□□□□□ -0.96
SMARCA4-206ENST00000538456 S100A1P23297 94 aa9.04□□□□□ -0.96
SMARCA4-206ENST00000538456 ELOBQ15370 118 aa9.04□□□□□ -0.96
SMARCA4-206ENST00000538456 FAM210AQ96ND0 272 aa9.04□□□□□ -0.96
SMARCA4-206ENST00000538456 A0A087WWL8 130 aa9.03□□□□□ -0.96
SMARCA4-206ENST00000538456 USP17L23D6RBM5 183 aa9.03□□□□□ -0.96
SMARCA4-206ENST00000538456 RHODO00212 210 aa9.03□□□□□ -0.96
SMARCA4-206ENST00000538456 HLA-DQA1P01909 254 aa9.03□□□□□ -0.96
SMARCA4-206ENST00000538456 STAG3L2P0CL84 134 aa9.03□□□□□ -0.96
SMARCA4-206ENST00000538456 STAG3L3P0CL85 134 aa9.03□□□□□ -0.96
SMARCA4-206ENST00000538456 Q0VG73 95 aa9.03□□□□□ -0.96
SMARCA4-206ENST00000538456 PIK3CD-AS1Q5SR53 167 aa9.03□□□□□ -0.96
SMARCA4-206ENST00000538456 CHCHD7Q9BUK0 85 aa9.03□□□□□ -0.96
SMARCA4-206ENST00000538456 A0A1B0GV50 99 aa9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 TMEM262E9PQX1 116 aa9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 CRPP02741 224 aa9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 SUMO1P63165 101 aaKnown RBP9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 CCL20P78556 96 aa9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 ENHOQ6UWT2 76 aa9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 C15orf54Q8N8G6 183 aa9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 SMDT1Q9H4I9 107 aa9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 IL36BQ9NZH7 164 aa9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 EPDR1Q9UM22 224 aa9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.02□□□□□ -0.97
SMARCA4-206ENST00000538456 TRAV34A0A0B4J273 112 aa9.01□□□□□ -0.97
SMARCA4-206ENST00000538456 B4DEV8 164 aa9.01□□□□□ -0.97
SMARCA4-206ENST00000538456 PANO1I0J062 215 aa9.01□□□□□ -0.97
SMARCA4-206ENST00000538456 CXorf1O96002 111 aa9.01□□□□□ -0.97
SMARCA4-206ENST00000538456 IFNA1P01562 189 aa9.01□□□□□ -0.97
SMARCA4-206ENST00000538456 GCHFRP30047 84 aa9.01□□□□□ -0.97
SMARCA4-206ENST00000538456 TAGLN2P37802 199 aaKnown RBP9.01□□□□□ -0.97
SMARCA4-206ENST00000538456 SAPCD1Q5SSQ6 148 aa9.01□□□□□ -0.97
SMARCA4-206ENST00000538456 MANBALQ9NQG1 85 aa9.01□□□□□ -0.97
SMARCA4-206ENST00000538456 M0R036 132 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms