RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 GNG8Q9UK08 70 aa1.09□□□□□ -2.23
MDM1-208ENST00000538454 MBD5Q9P267 1494 aa1.09□□□□□ -2.24
MDM1-208ENST00000538454 FAM135AQ9P2D6 1515 aa1.09□□□□□ -2.24
MDM1-208ENST00000538454 ESPL1Q14674 2120 aa1.09□□□□□ -2.24
MDM1-208ENST00000538454 SMARCA2P51531 1590 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 CDK12Q9NYV4 1490 aaPredicted RBP1.08□□□□□ -2.24
MDM1-208ENST00000538454 CNTRLQ7Z7A1 2325 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.08□□□□□ -2.24
MDM1-208ENST00000538454 TEX49A0A1B0GTD5 131 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 SPAARA0A1B0GVQ0 90 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 F6UZH7 168 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 NDUFB6O95139 128 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 PRB4P10163 310 aaPredicted RBP1.08□□□□□ -2.24
MDM1-208ENST00000538454 CAV3P56539 151 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 SPTSSAQ969W0 71 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 TMEM141Q96I45 108 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 RERGLQ9H628 205 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 PARP14Q460N5 1801 aa1.08□□□□□ -2.24
MDM1-208ENST00000538454 ZDBF2Q9HCK1 2354 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 TRBV30A0A0K0K1B3 111 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 NBDYA0A0U1RRE5 68 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 LOC101927531A0A1B0GV80 90 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 A6NIN4 97 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 CORTO00230 105 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 SNCGO76070 127 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 FXYD3Q14802 87 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 C14orf144Q96I85 54 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 CCL19Q99731 98 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 TCEAL7Q9BRU2 100 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 SEC11CQ9BY50 192 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 AGPAT4-IT1Q9H0P7 198 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 NAA60Q9H7X0 242 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 SCN3BQ9NY72 215 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 PLXNA1Q9UIW2 1896 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 RREB1Q92766 1687 aa1.07□□□□□ -2.24
MDM1-208ENST00000538454 DAPK1P53355 1430 aa1.06□□□□□ -2.24
MDM1-208ENST00000538454 PTPRMP28827 1452 aa1.06□□□□□ -2.24
MDM1-208ENST00000538454 MUC22E2RYF6 1773 aaPredicted RBP1.06□□□□□ -2.24
MDM1-208ENST00000538454 HIST1H1DP16402 221 aaKnown RBP1.06□□□□□ -2.24
MDM1-208ENST00000538454 RPL7L1Q6DKI1 246 aaKnown RBP1.06□□□□□ -2.24
MDM1-208ENST00000538454 SLC48A1Q6P1K1 146 aa1.06□□□□□ -2.24
MDM1-208ENST00000538454 Q6ZS92 163 aa1.06□□□□□ -2.24
MDM1-208ENST00000538454 C5orf56Q8N8D9 126 aa1.06□□□□□ -2.24
MDM1-208ENST00000538454 TSKUQ8WUA8 353 aa1.06□□□□□ -2.24
MDM1-208ENST00000538454 PPP1R1CQ8WVI7 109 aa1.06□□□□□ -2.24
MDM1-208ENST00000538454 PP6455Q8WZ26 134 aa1.06□□□□□ -2.24
MDM1-208ENST00000538454 IFI27L1Q96BM0 104 aa1.06□□□□□ -2.24
MDM1-208ENST00000538454 LAMA4Q16363 1823 aa1.05□□□□□ -2.24
MDM1-208ENST00000538454 CFTRP13569 1480 aa1.05□□□□□ -2.24
MDM1-208ENST00000538454 CUL7Q14999 1698 aa1.05□□□□□ -2.24
MDM1-208ENST00000538454 TFF1P04155 84 aa1.05□□□□□ -2.24
MDM1-208ENST00000538454 AKAIN1P0CW23 69 aa1.05□□□□□ -2.24
MDM1-208ENST00000538454 MRPS10P82664 201 aaKnown RBP1.05□□□□□ -2.24
MDM1-208ENST00000538454 C9orf116Q5BN46 136 aaPredicted RBP1.05□□□□□ -2.24
MDM1-208ENST00000538454 C10orf99Q6UWK7 81 aa1.05□□□□□ -2.24
MDM1-208ENST00000538454 Q86TA4 180 aa1.05□□□□□ -2.24
MDM1-208ENST00000538454 LINC00208Q96KT6 92 aa1.05□□□□□ -2.24
MDM1-208ENST00000538454 RPRMQ9NS64 109 aa1.05□□□□□ -2.24
MDM1-208ENST00000538454 BLMP54132 1417 aaPredicted RBP1.05□□□□□ -2.24
MDM1-208ENST00000538454 MRC2Q9UBG0 1479 aa1.05□□□□□ -2.24
MDM1-208ENST00000538454 PIGBOS1A0A0B4J2F0 54 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 TCRBV3S1A0A5B6 114 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 C20orf202A1L168 122 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 IFNA17P01571 189 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 SMIM6P0DI80 62 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 CBLN1P23435 193 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 RBP2P50120 134 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 GNG4P50150 75 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 CYP2G1PQ6ZSU1 146 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 COA4Q9NYJ1 87 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 SERP1Q9Y6X1 66 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 CCNB3Q8WWL7 1395 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 KNTC1P50748 2209 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 QRICH2Q9H0J4 1663 aa1.04□□□□□ -2.24
MDM1-208ENST00000538454 BCORL1Q5H9F3 1711 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 TRAV12-3A0A0B4J271 114 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 A0A1W2PPM0 123 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 SNAPC5O75971 98 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 KRTAP10-4P60372 401 aaPredicted RBP1.03□□□□□ -2.24
MDM1-208ENST00000538454 UBE2G1P62253 170 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 ZNF56Q15929 161 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 Q56UQ5 140 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 C12orf73Q69YU5 71 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 Q6AWC8 147 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 PPP3R2Q96LZ3 170 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 BET1LQ9NYM9 111 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 A2ML1A8K2U0 1454 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 MYOM2P54296 1465 aa1.03□□□□□ -2.24
MDM1-208ENST00000538454 PHIPQ8WWQ0 1821 aa1.03□□□□□ -2.25
MDM1-208ENST00000538454 MED13LQ71F56 2210 aa1.03□□□□□ -2.25
MDM1-208ENST00000538454 MCRIP1C9JLW8 97 aa1.02□□□□□ -2.25
MDM1-208ENST00000538454 KDM6BO15054 1643 aa1.02□□□□□ -2.25
MDM1-208ENST00000538454 PPP3R1P63098 170 aa1.02□□□□□ -2.25
MDM1-208ENST00000538454 KLKP1Q107X0 134 aa1.02□□□□□ -2.25
MDM1-208ENST00000538454 Q8N6K4 173 aa1.02□□□□□ -2.25
MDM1-208ENST00000538454 LSM10Q969L4 123 aaKnown RBP1.02□□□□□ -2.25
MDM1-208ENST00000538454 NRXN2Q9P2S2 1712 aa1.02□□□□□ -2.25
MDM1-208ENST00000538454 MYH8P13535 1937 aa1.01□□□□□ -2.25
MDM1-208ENST00000538454 PZPP20742 1482 aa1.01□□□□□ -2.25
MDM1-208ENST00000538454 APOC4-APOC2K7ER74 178 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms