RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 A0A087WWL8 130 aa7.68□□□□□ -1.18
TNFRSF1A-211ENST00000538363 DAD1P61803 113 aa7.68□□□□□ -1.18
TNFRSF1A-211ENST00000538363 DAZ2Q13117 558 aaKnown RBP7.68□□□□□ -1.18
TNFRSF1A-211ENST00000538363 LGALS9BQ3B8N2 356 aa7.68□□□□□ -1.18
TNFRSF1A-211ENST00000538363 SCRT2Q9NQ03 307 aa7.68□□□□□ -1.18
TNFRSF1A-211ENST00000538363 IGHV3-73A0A0B4J1V6 119 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 TRGV4A0A0C4DH28 118 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 TEX48A0A1B0GUV7 120 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 LYRM9A8MSI8 78 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 RHODO00212 210 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 IGHV3-53P01767 116 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 EVI2AP22794 236 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 CKS2P33552 79 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 FAM222AQ5U5X8 452 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 TMEM136Q6ZRR5 245 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 Q6ZTI0 123 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 TMEM191AQ9H0A3 160 aa7.67□□□□□ -1.18
TNFRSF1A-211ENST00000538363 DNAH3Q8TD57 4116 aa7.66□□□□□ -1.18
TNFRSF1A-211ENST00000538363 A0A1B0GXF2 115 aa7.66□□□□□ -1.18
TNFRSF1A-211ENST00000538363 KIAA1644Q3SXP7 199 aa7.66□□□□□ -1.18
TNFRSF1A-211ENST00000538363 PIK3CD-AS1Q5SR53 167 aa7.66□□□□□ -1.18
TNFRSF1A-211ENST00000538363 AMN1Q8IY45 258 aa7.66□□□□□ -1.18
TNFRSF1A-211ENST00000538363 PTH2Q96A98 100 aa7.66□□□□□ -1.18
TNFRSF1A-211ENST00000538363 B9D2Q9BPU9 175 aa7.66□□□□□ -1.18
TNFRSF1A-211ENST00000538363 NDUFAF3Q9BU61 184 aa7.66□□□□□ -1.18
TNFRSF1A-211ENST00000538363 CNFNQ9BYD5 112 aa7.66□□□□□ -1.18
TNFRSF1A-211ENST00000538363 JPT2Q9H910 190 aa7.66□□□□□ -1.18
TNFRSF1A-211ENST00000538363 H7C1H1 209 aa7.65□□□□□ -1.18
TNFRSF1A-211ENST00000538363 TRGC2P03986 189 aa7.65□□□□□ -1.18
TNFRSF1A-211ENST00000538363 HTN3P15516 51 aa7.65□□□□□ -1.18
TNFRSF1A-211ENST00000538363 RAB5BP61020 215 aa7.65□□□□□ -1.18
TNFRSF1A-211ENST00000538363 FAM104BQ5XKR9 115 aa7.65□□□□□ -1.18
TNFRSF1A-211ENST00000538363 ZNF575Q86XF7 245 aa7.65□□□□□ -1.18
TNFRSF1A-211ENST00000538363 RASL10AQ92737 203 aa7.65□□□□□ -1.18
TNFRSF1A-211ENST00000538363 YPEL4Q96NS1 127 aa7.65□□□□□ -1.18
TNFRSF1A-211ENST00000538363 TRAV4A0A0B4J268 109 aa7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 A0A0J9YWU9 116 aa7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 RS1O15537 224 aa7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 CIDEAO60543 219 aa7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 NXPH4O95158 308 aa7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 PPP1R17O96001 155 aa7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 NHLRC4P0CG21 123 aaPredicted RBP7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 RAB4AP20338 218 aa7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 ORMDL3Q8N138 153 aa7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 Q8NAQ8 132 aa7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 MRAP2Q96G30 205 aa7.64□□□□□ -1.19
TNFRSF1A-211ENST00000538363 PPBPP02775 128 aa7.63□□□□□ -1.19
TNFRSF1A-211ENST00000538363 MRPL51Q4U2R6 128 aaKnown RBP7.63□□□□□ -1.19
TNFRSF1A-211ENST00000538363 CFAP126Q5VTH2 177 aa7.63□□□□□ -1.19
TNFRSF1A-211ENST00000538363 C11orf45Q8TAV5 145 aa7.63□□□□□ -1.19
TNFRSF1A-211ENST00000538363 PRELID3AQ96N28 172 aa7.63□□□□□ -1.19
TNFRSF1A-211ENST00000538363 TM2D3Q9BRN9 247 aa7.63□□□□□ -1.19
TNFRSF1A-211ENST00000538363 SAMD10Q9BYL1 202 aa7.63□□□□□ -1.19
TNFRSF1A-211ENST00000538363 DKK2Q9UBU2 259 aa7.63□□□□□ -1.19
TNFRSF1A-211ENST00000538363 MEGF8Q7Z7M0 2845 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 D6R8Y8 96 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 F5H768 121 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 ATP5G1P05496 136 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 S100A6P06703 90 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 SRIP30626 198 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 SLAQ13239 276 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 OR10J3Q5JRS4 329 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 IL17DQ8TAD2 202 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 PRADC1Q9BSG0 188 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 TMA7Q9Y2S6 64 aaKnown RBP7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 TNFRSF18Q9Y5U5 241 aa7.62□□□□□ -1.19
TNFRSF1A-211ENST00000538363 MUC4Q99102 2169 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 TRAV26-2A0A0B4J265 109 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 PLAC8L1A1L4L8 177 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 SMKR1H3BMG3 65 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 NCR2O95944 276 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 CRYGDP07320 174 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 SUMO4Q6EEV6 95 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 ZFP2Q6ZN57 461 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 BAGE3Q86Y29 109 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 GATD1Q8NB37 220 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 PRSS3P2Q8NHM4 247 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 ZNF479Q96JC4 524 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 MAP1LC3AQ9H492 121 aa7.61□□□□□ -1.19
TNFRSF1A-211ENST00000538363 LOC389332A0A1B0GUA5 103 aa7.6□□□□□ -1.19
TNFRSF1A-211ENST00000538363 NDUFA6P56556 154 aa7.6□□□□□ -1.19
TNFRSF1A-211ENST00000538363 RNF185Q96GF1 192 aa7.6□□□□□ -1.19
TNFRSF1A-211ENST00000538363 ST20Q9HBF5 79 aa7.6□□□□□ -1.19
TNFRSF1A-211ENST00000538363 EREGO14944 169 aa7.59□□□□□ -1.19
TNFRSF1A-211ENST00000538363 RPL36AP83881 106 aaKnown RBP7.59□□□□□ -1.19
TNFRSF1A-211ENST00000538363 FA2HQ7L5A8 372 aa7.59□□□□□ -1.19
TNFRSF1A-211ENST00000538363 RPL36ALQ969Q0 106 aaKnown RBP7.59□□□□□ -1.19
TNFRSF1A-211ENST00000538363 CELA1Q9UNI1 258 aa7.59□□□□□ -1.19
TNFRSF1A-211ENST00000538363 HHLA3Q9XRX5 114 aa7.59□□□□□ -1.19
TNFRSF1A-211ENST00000538363 LAMTOR2Q9Y2Q5 125 aa7.59□□□□□ -1.19
TNFRSF1A-211ENST00000538363 K7EQD1 137 aa7.58□□□□□ -1.2
TNFRSF1A-211ENST00000538363 PAX4O43316 350 aa7.58□□□□□ -1.2
TNFRSF1A-211ENST00000538363 TNFRSF6BO95407 300 aa7.58□□□□□ -1.2
TNFRSF1A-211ENST00000538363 PMCHP20382 165 aa7.58□□□□□ -1.2
TNFRSF1A-211ENST00000538363 NANOS2P60321 138 aaKnown RBP7.58□□□□□ -1.2
TNFRSF1A-211ENST00000538363 ALKBH7Q9BT30 221 aaPredicted RBP7.58□□□□□ -1.2
TNFRSF1A-211ENST00000538363 NIT2Q9NQR4 276 aa7.58□□□□□ -1.2
TNFRSF1A-211ENST00000538363 KIF25-AS1Q9Y6Z4 181 aa7.58□□□□□ -1.2
TNFRSF1A-211ENST00000538363 U3KQK5 164 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms