RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 PRR27Q6MZM9 219 aa5.68□□□□□ -1.5
SPARC-208ENST00000538026 VAX2Q9UIW0 290 aa5.68□□□□□ -1.5
SPARC-208ENST00000538026 KIF25-AS1Q9Y6Z4 181 aa5.68□□□□□ -1.5
SPARC-208ENST00000538026 RBFOX3A6NFN3 312 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 K7EN84 100 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 M0R381 172 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 CIDEAO60543 219 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 CXCL1P09341 107 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 IGLC6P0CF74 106 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 MED14OSP0DP75 135 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 MGST1P10620 155 aaKnown RBP5.67□□□□□ -1.5
SPARC-208ENST00000538026 KRTAP10-2P60368 255 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 RHOHQ15669 191 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 TXNDC17Q9BRA2 123 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 MED9Q9NWA0 146 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 MSRB1Q9NZV6 116 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 PHLDA3Q9Y5J5 127 aa5.67□□□□□ -1.5
SPARC-208ENST00000538026 GAGE12JA6NER3 117 aa5.66□□□□□ -1.5
SPARC-208ENST00000538026 PDE6DO43924 150 aa5.66□□□□□ -1.5
SPARC-208ENST00000538026 OR5AL1P0C617 328 aa5.66□□□□□ -1.5
SPARC-208ENST00000538026 FUSP35637 526 aaKnown RBP eCLIP5.66□□□□□ -1.5
SPARC-208ENST00000538026 GAGE1Q13065 139 aa5.66□□□□□ -1.5
SPARC-208ENST00000538026 GAGE4Q13068 117 aa5.66□□□□□ -1.5
SPARC-208ENST00000538026 GAGE5Q13069 117 aa5.66□□□□□ -1.5
SPARC-208ENST00000538026 GAGE13Q4V321 117 aa5.66□□□□□ -1.5
SPARC-208ENST00000538026 OCC1Q8TAD7 63 aa5.66□□□□□ -1.5
SPARC-208ENST00000538026 PCNPQ8WW12 178 aaKnown RBP5.66□□□□□ -1.5
SPARC-208ENST00000538026 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
SPARC-208ENST00000538026 C9JQL5 133 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 GNG4P50150 75 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 SSTP61278 116 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 TTC32Q5I0X7 151 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 SOHLH1Q5JUK2 328 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 FAM74A4Q5TZK3 123 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 ZFP82Q8N141 532 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 NUDT10Q8NFP7 164 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 ATP6V0E2Q8NHE4 81 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 NUDT11Q96G61 164 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 PRADC1Q9BSG0 188 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 GTSF1LQ9H1H1 148 aa5.65□□□□□ -1.5
SPARC-208ENST00000538026 FAT3Q8TDW7 4589 aa5.65□□□□□ -1.51
SPARC-208ENST00000538026 TEX46H3BTG2 121 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 IFNA1P01562 189 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 BTF3P20290 206 aaKnown RBP5.64□□□□□ -1.51
SPARC-208ENST00000538026 BLOC1S1P78537 153 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 LINC01556Q5JQF7 62 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 LELP1Q5T871 98 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 SH2D6Q7Z4S9 175 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 SYT8Q8NBV8 401 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 OR2D3Q8NGH3 330 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 DNAJC30Q96LL9 226 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 RNASE7Q9H1E1 156 aaKnown RBP5.64□□□□□ -1.51
SPARC-208ENST00000538026 LY96Q9Y6Y9 160 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 HERC1Q15751 4861 aa5.64□□□□□ -1.51
SPARC-208ENST00000538026 IGHV3-38A0A0C4DH36 116 aa5.63□□□□□ -1.51
SPARC-208ENST00000538026 RHODO00212 210 aa5.63□□□□□ -1.51
SPARC-208ENST00000538026 UBE2D3P61077 147 aa5.63□□□□□ -1.51
SPARC-208ENST00000538026 UBE2D2P62837 147 aa5.63□□□□□ -1.51
SPARC-208ENST00000538026 SRSF3P84103 164 aaKnown RBP5.63□□□□□ -1.51
SPARC-208ENST00000538026 TOR2AQ5JU69 321 aa5.63□□□□□ -1.51
SPARC-208ENST00000538026 NEXN-AS1Q8NBZ9 246 aa5.63□□□□□ -1.51
SPARC-208ENST00000538026 OR10G8Q8NGN5 311 aa5.63□□□□□ -1.51
SPARC-208ENST00000538026 GTSF1Q8WW33 167 aa5.63□□□□□ -1.51
SPARC-208ENST00000538026 SMIM12Q96EX1 92 aa5.63□□□□□ -1.51
SPARC-208ENST00000538026 SRRM2Q9UQ35 2752 aaKnown RBP5.62□□□□□ -1.51
SPARC-208ENST00000538026 IBA57-AS1B1ANH7 110 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 TMEM250H0YL14 139 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 IGHV3-30P01768 117 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 IGHV3-33P01772 117 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 SRP19P09132 144 aaKnown RBP5.62□□□□□ -1.51
SPARC-208ENST00000538026 IGHV3-30-3P0DP02 117 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 IGHV3-30-5P0DP03 117 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 TAGLN2P37802 199 aaKnown RBP5.62□□□□□ -1.51
SPARC-208ENST00000538026 RAB4BP61018 213 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 OR10J3Q5JRS4 329 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 LYZL1Q6UWQ5 148 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 SPATA12Q7Z6I5 190 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 FER1L6-AS1Q8NA97 138 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 FAM210AQ96ND0 272 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
SPARC-208ENST00000538026 LRP1Q07954 4544 aaKnown RBP5.61□□□□□ -1.51
SPARC-208ENST00000538026 TRBV7-3A0A075B6L6 115 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 A0A087WTM6 91 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 TRBV10-1A0A0K0K1A3 114 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 LRCOL1A6NCL2 159 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 M0QY20 66 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 P01737 135 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 EVI2AP22794 236 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 CTRLP40313 264 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 FOXA3P55318 350 aaPredicted RBP5.61□□□□□ -1.51
SPARC-208ENST00000538026 SPANXN1Q5VSR9 72 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 TEX261Q6UWH6 196 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 NTM-AS1Q6ZSK4 140 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 DAZ4Q86SG3 579 aaKnown RBP5.61□□□□□ -1.51
SPARC-208ENST00000538026 MAPKAPK5-AS1Q8N8E1 139 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 DAZAP1Q96EP5 407 aaKnown RBP5.61□□□□□ -1.51
SPARC-208ENST00000538026 CNFNQ9BYD5 112 aa5.61□□□□□ -1.51
SPARC-208ENST00000538026 DAZ3Q9NR90 486 aaKnown RBP5.61□□□□□ -1.51
SPARC-208ENST00000538026 TRAV8-6A0A0B4J262 113 aa5.6□□□□□ -1.51
SPARC-208ENST00000538026 C16orf90A8MZG2 172 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms