RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 BUB1B-PAK6H3BSN5 160 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 WDR86Q86TI4 376 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 IGF2BP2-AS1Q96M15 143 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 SND1-IT1Q9HBX3 110 aa4.47□□□□□ -1.69
CSMD1-215ENST00000537824 GDF5OSQ5U4N7 250 aa4.46□□□□□ -1.69
CSMD1-215ENST00000537824 CLPSP04118 112 aa4.46□□□□□ -1.69
CSMD1-215ENST00000537824 NDUFA11Q86Y39 141 aa4.46□□□□□ -1.69
CSMD1-215ENST00000537824 WT1-ASQ06250 92 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 C7orf69Q9H7B7 122 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 BUB3O43684 328 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 CSRP1P21291 193 aaKnown RBP4.46□□□□□ -1.7
CSMD1-215ENST00000537824 CHKB-CPT1BH3BT56 60 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 VPREB3Q9UKI3 123 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.46□□□□□ -1.7
CSMD1-215ENST00000537824 Q71RC1 249 aaPredicted RBP4.46□□□□□ -1.7
CSMD1-215ENST00000537824 RHPN1-AS1Q9BWJ2 59 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 H3BRN7 92 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 NREPQ16612 68 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 CFAP46Q8IYW2 2715 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 C2orf70A6NJV1 201 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 SAP25Q8TEE9 199 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 USMG5Q96IX5 58 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 SMIM9A6NGZ8 99 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 COX6B1P14854 86 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 C17orf77Q96MU5 243 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 RNF5Q99942 180 aa4.46□□□□□ -1.7
CSMD1-215ENST00000537824 DEFB130BP0DP73 79 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 DEFB130AP0DP74 79 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 XCL1P47992 114 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 HELZ2Q9BYK8 2649 aaKnown RBP4.45□□□□□ -1.7
CSMD1-215ENST00000537824 PROP1O75360 226 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 NSD1Q96L73 2696 aaPredicted RBP4.45□□□□□ -1.7
CSMD1-215ENST00000537824 TRBV12-3P01733 135 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 LTBRP36941 435 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 OPRPNQ99935 248 aaPredicted RBP4.45□□□□□ -1.7
CSMD1-215ENST00000537824 Q9HAA7 133 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 MSRB1Q9NZV6 116 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 FAM167A-AS1Q96KT0 104 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 ATP5EP56381 51 aaPredicted RBP4.45□□□□□ -1.7
CSMD1-215ENST00000537824 LRRC75A-AS1Q8N1F1 130 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 ATP5EP2Q5VTU8 51 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 SERP2Q8N6R1 65 aa4.45□□□□□ -1.7
CSMD1-215ENST00000537824 GNRH2O43555 120 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 ZNF503Q96F45 646 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 SNURFQ9Y675 71 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 FAM110AQ9BQ89 295 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 H0YGX0 51 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 PRSS22Q9GZN4 317 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 XCL2Q9UBD3 114 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 LECT2O14960 151 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 XGP55808 180 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 MINOS1Q5TGZ0 78 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 MINOS1-NBL1R4GNA1 71 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 IGLV3-12A0A075B6K2 115 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 WI2-2373I1.2A0A1W2PRP0 233 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 RPL39P62891 51 aaKnown RBP4.44□□□□□ -1.7
CSMD1-215ENST00000537824 ZNF833PQ6ZTB9 187 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 A0A0J9YXV3 536 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 CTRLP40313 264 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 IGKV2D-26A0A0A0MRZ7 120 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 C11orf86A6NJI1 115 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 C11orf44Q8N8P7 122 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 RNASE6Q93091 150 aaKnown RBP4.44□□□□□ -1.7
CSMD1-215ENST00000537824 A6NED7 52 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 K7EM74 188 aa4.44□□□□□ -1.7
CSMD1-215ENST00000537824 TPSG1Q9NRR2 321 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 ZNF561-AS1K7EIQ3 104 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 PRR20EP86478 221 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 PRR20CP86479 221 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 PRR20DP86480 221 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 PRR20BP86481 221 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 PRR20AP86496 221 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 RETNQ9HD89 108 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 OOSP1A8MZH6 123 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 YPEL4Q96NS1 127 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 FAM223BA6NKX1 122 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 FAM223AQ8IWN6 122 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 ZNRF2Q8NHG8 242 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 PROK2Q9HC23 129 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 PRR19A6NJB7 356 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 C15orf65H3BRN8 121 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 CMC4P56277 68 aaPredicted RBP4.43□□□□□ -1.7
CSMD1-215ENST00000537824 DAZ1Q9NQZ3 744 aaKnown RBP4.43□□□□□ -1.7
CSMD1-215ENST00000537824 LYPD2Q6UXB3 125 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 DEFB123Q8N688 67 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 TIMM17BO60830 172 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 AGPAT4-IT1Q9H0P7 198 aa4.43□□□□□ -1.7
CSMD1-215ENST00000537824 MRPS12O15235 138 aaKnown RBP4.42□□□□□ -1.7
CSMD1-215ENST00000537824 ELANEP08246 267 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 GP9P14770 177 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 NSUN5P1Q3KNT7 163 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 TOMM6Q96B49 74 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 TM2D2Q9BX73 214 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 DEFB131AP59861 70 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 MIAQ16674 131 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 C17orf58Q2M2W7 97 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 C5orf38Q86SI9 138 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 G3V318 75 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 NCR3O14931 201 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms