RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 C9JCJ5 164 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 K7EQD1 137 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 SIVA1O15304 175 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 BCL2L11O43521 198 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 GATA1P15976 413 aaPredicted RBP4.8□□□□□ -1.64
YBX3-206ENST00000536823 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 SRIP30626 198 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 FHITP49789 147 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 ZNF506Q5JVG8 444 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 DPPA3Q6W0C5 159 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 STOML3Q8TAV4 291 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 PTH2Q96A98 100 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 TXNDC17Q9BRA2 123 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 TCEAL7Q9BRU2 100 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 PCLOQ9Y6V0 5065 aa4.8□□□□□ -1.64
YBX3-206ENST00000536823 TRBV6-1A0A0K0K1D8 114 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 LOC100131303A0A0U1RQF7 123 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 KANTRA0A1W2PQU2 76 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 PGPEP1LA6NFU8 196 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 UMAD1C9J7I0 102 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 RS1O15537 224 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 CIDEAO60543 219 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 SEC11BP0C7V7 166 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 RNASE3P12724 160 aaKnown RBP4.79□□□□□ -1.64
YBX3-206ENST00000536823 LINC00315P59091 139 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 ZNF876PQ49A33 203 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 SERTAD4-AS1Q5TG53 156 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 CFAP126Q5VTH2 177 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 LYPD5Q6UWN5 251 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 COX8CQ7Z4L0 72 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 SH2D6Q7Z4S9 175 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 MPLKIPQ8TAP9 179 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 FAM213BQ8TBF2 198 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 FMC1Q96HJ9 113 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 ZNF471Q9BX82 626 aaPredicted RBP4.79□□□□□ -1.64
YBX3-206ENST00000536823 MSRB1Q9NZV6 116 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 ZFP30Q9Y2G7 519 aa4.79□□□□□ -1.64
YBX3-206ENST00000536823 IGKV3D-20A0A0C4DH25 116 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 GAGE12JA6NER3 117 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 FABP5P3A8MUU1 101 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 B4DEV8 164 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 SCGB1D1O95968 90 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 S100A4P26447 101 aaKnown RBP4.78□□□□□ -1.64
YBX3-206ENST00000536823 ASIPP42127 132 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 AKR1C3P42330 323 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 UBE2G1P62253 170 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 EIF5AP63241 154 aaKnown RBP4.78□□□□□ -1.64
YBX3-206ENST00000536823 RHOHQ15669 191 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 CST9LP1Q5W188 147 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 Q6ZRN7 208 aaPredicted RBP4.78□□□□□ -1.64
YBX3-206ENST00000536823 SFT2D1Q8WV19 159 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 MBD3L1Q8WWY6 194 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 ZC2HC1AQ96GY0 325 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 DNAH5Q8TE73 4624 aa4.78□□□□□ -1.64
YBX3-206ENST00000536823 APOBP04114 4563 aaKnown RBP4.77□□□□□ -1.65
YBX3-206ENST00000536823 TRBV6-4A0A1B0GX49 114 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 C16orf90A8MZG2 172 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 KRBOX1C9JBD0 128 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 PAGE4O60829 102 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 SH2D1AO60880 128 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 PFDN1O60925 122 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 LTAP01374 205 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 TPT1P13693 172 aaKnown RBP4.77□□□□□ -1.65
YBX3-206ENST00000536823 CRIP1P50238 77 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 DNLZQ5SXM8 178 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 FAM162BQ5T6X4 162 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 TMUB2Q71RG4 321 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 WFDC10BQ8IUB3 73 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 SLC25A29Q8N8R3 303 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 NHLRC2Q8NBF2 726 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 PRADC1Q9BSG0 188 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 KRTAP4-4Q9BYR3 166 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 PARLQ9H300 379 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 IL36BQ9NZH7 164 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 LY96Q9Y6Y9 160 aa4.77□□□□□ -1.65
YBX3-206ENST00000536823 IGHV3-73A0A0B4J1V6 119 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 A0A1B0GV50 99 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 A8MWV9 139 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 H3BVH4 76 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 K7EP13 123 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 M0R036 132 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 S100A9P06702 114 aaKnown RBP4.76□□□□□ -1.65
YBX3-206ENST00000536823 DNAH10OSP0CZ25 163 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 MGST1P10620 155 aaKnown RBP4.76□□□□□ -1.65
YBX3-206ENST00000536823 ZNF674Q2M3X9 581 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 ZFP2Q6ZN57 461 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 SPATA12Q7Z6I5 190 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 TCTE3Q8IZS6 198 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 PRSS3P2Q8NHM4 247 aa4.76□□□□□ -1.65
YBX3-206ENST00000536823 TRAV9-2A0A087WT02 112 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 TRAV1-1A0A0B4J248 108 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 CXCL1P09341 107 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 ARMS2P0C7Q2 107 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 LINC00694P0DN24 101 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 EVI2AP22794 236 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 RAB5CP51148 216 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 LGALSLQ3ZCW2 172 aaPredicted RBP4.75□□□□□ -1.65
YBX3-206ENST00000536823 LINC01556Q5JQF7 62 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 UFSP1Q6NVU6 142 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms