RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 ADIRFQ15847 76 aa9.42□□□□□ -0.9
RPAIN-205ENST00000536255 RNF212Q495C1 297 aa9.42□□□□□ -0.9
RPAIN-205ENST00000536255 UQCC3Q6UW78 93 aa9.42□□□□□ -0.9
RPAIN-205ENST00000536255 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
RPAIN-205ENST00000536255 DNAH10Q8IVF4 4471 aa9.42□□□□□ -0.9
RPAIN-205ENST00000536255 TRBV6-4A0A1B0GX49 114 aa9.41□□□□□ -0.9
RPAIN-205ENST00000536255 SMIM17P0DL12 118 aa9.41□□□□□ -0.9
RPAIN-205ENST00000536255 GYPEP15421 78 aa9.41□□□□□ -0.9
RPAIN-205ENST00000536255 FAM3BP58499 235 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-205ENST00000536255 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
RPAIN-205ENST00000536255 FAM74A4Q5TZK3 123 aa9.41□□□□□ -0.9
RPAIN-205ENST00000536255 ISOC2Q96AB3 205 aa9.41□□□□□ -0.9
RPAIN-205ENST00000536255 AP1S3Q96PC3 154 aa9.41□□□□□ -0.9
RPAIN-205ENST00000536255 JPT2Q9H910 190 aa9.41□□□□□ -0.9
RPAIN-205ENST00000536255 A0A096LPF7 62 aa9.4□□□□□ -0.9
RPAIN-205ENST00000536255 MUC21A0A0G2JKD1 596 aa9.4□□□□□ -0.9
RPAIN-205ENST00000536255 MUC21A0A140T8X8 626 aa9.4□□□□□ -0.9
RPAIN-205ENST00000536255 SRIP30626 198 aa9.4□□□□□ -0.9
RPAIN-205ENST00000536255 CTRLP40313 264 aa9.4□□□□□ -0.9
RPAIN-205ENST00000536255 UFSP1Q6NVU6 142 aa9.4□□□□□ -0.9
RPAIN-205ENST00000536255 WDR73Q6P4I2 378 aa9.4□□□□□ -0.9
RPAIN-205ENST00000536255 LYZL1Q6UWQ5 148 aa9.4□□□□□ -0.9
RPAIN-205ENST00000536255 SH2D6Q7Z4S9 175 aa9.4□□□□□ -0.9
RPAIN-205ENST00000536255 SLC25A29Q8N8R3 303 aa9.4□□□□□ -0.9
RPAIN-205ENST00000536255 BIRC6Q9NR09 4857 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 A0A087WWL8 130 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 FAM231BA6NCW3 169 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 K7EQD1 137 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 CRYGDP07320 174 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 TRGC1P0CF51 173 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 SSTP61278 116 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 NEGR1Q7Z3B1 354 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 OR10G8Q8NGN5 311 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 SAMD10Q9BYL1 202 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 GFRA4Q9GZZ7 299 aa9.39□□□□□ -0.91
RPAIN-205ENST00000536255 PNRC1Q12796 327 aaPredicted RBP9.38□□□□□ -0.91
RPAIN-205ENST00000536255 BORCS7Q96B45 105 aa9.38□□□□□ -0.91
RPAIN-205ENST00000536255 CNFNQ9BYD5 112 aa9.38□□□□□ -0.91
RPAIN-205ENST00000536255 NACAE9PAV3 2078 aa9.38□□□□□ -0.91
RPAIN-205ENST00000536255 NTF3P20783 257 aa9.37□□□□□ -0.91
RPAIN-205ENST00000536255 FOXA3P55318 350 aaPredicted RBP9.37□□□□□ -0.91
RPAIN-205ENST00000536255 RAB4BP61018 213 aa9.37□□□□□ -0.91
RPAIN-205ENST00000536255 ZNF56Q15929 161 aa9.37□□□□□ -0.91
RPAIN-205ENST00000536255 COMMD7Q86VX2 200 aa9.37□□□□□ -0.91
RPAIN-205ENST00000536255 C14orf178Q8N769 122 aaPredicted RBP9.37□□□□□ -0.91
RPAIN-205ENST00000536255 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
RPAIN-205ENST00000536255 V9GYV3 84 aa9.37□□□□□ -0.91
RPAIN-205ENST00000536255 IGLV2-18A0A075B6J9 118 aa9.36□□□□□ -0.91
RPAIN-205ENST00000536255 HIGD1CA8MV81 97 aa9.36□□□□□ -0.91
RPAIN-205ENST00000536255 F5H697 171 aa9.36□□□□□ -0.91
RPAIN-205ENST00000536255 M0R2N4 97 aa9.36□□□□□ -0.91
RPAIN-205ENST00000536255 TWIST1Q15672 202 aa9.36□□□□□ -0.91
RPAIN-205ENST00000536255 ESRGQ1W209 222 aa9.36□□□□□ -0.91
RPAIN-205ENST00000536255 SMIM15Q7Z3B0 74 aa9.36□□□□□ -0.91
RPAIN-205ENST00000536255 LINC00588Q9Y4M8 146 aa9.36□□□□□ -0.91
RPAIN-205ENST00000536255 FRAS1Q86XX4 4008 aa9.35□□□□□ -0.91
RPAIN-205ENST00000536255 DNAH2Q9P225 4427 aa9.35□□□□□ -0.91
RPAIN-205ENST00000536255 TRBV10-1A0A0K0K1A3 114 aa9.35□□□□□ -0.91
RPAIN-205ENST00000536255 LOC100131303A0A0U1RQF7 123 aa9.35□□□□□ -0.91
RPAIN-205ENST00000536255 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
RPAIN-205ENST00000536255 Q6ZSN1 163 aa9.35□□□□□ -0.91
RPAIN-205ENST00000536255 PGLYRP4Q96LB8 373 aa9.35□□□□□ -0.91
RPAIN-205ENST00000536255 MSRB1Q9NZV6 116 aa9.35□□□□□ -0.91
RPAIN-205ENST00000536255 MRPS16Q9Y3D3 137 aaKnown RBP9.35□□□□□ -0.91
RPAIN-205ENST00000536255 TMEM218A2RU14 115 aa9.34□□□□□ -0.91
RPAIN-205ENST00000536255 PPP1R2P9O14990 202 aa9.34□□□□□ -0.91
RPAIN-205ENST00000536255 Q6ZR54 194 aa9.34□□□□□ -0.91
RPAIN-205ENST00000536255 ZNRF2Q8NHG8 242 aa9.34□□□□□ -0.91
RPAIN-205ENST00000536255 UPK3BQ9BT76 320 aa9.34□□□□□ -0.91
RPAIN-205ENST00000536255 DPH3P1Q9H4G8 78 aa9.34□□□□□ -0.91
RPAIN-205ENST00000536255 NAT8BQ9UHF3 227 aa9.34□□□□□ -0.91
RPAIN-205ENST00000536255 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
RPAIN-205ENST00000536255 F8W036 122 aa9.33□□□□□ -0.92
RPAIN-205ENST00000536255 H7C1H1 209 aa9.33□□□□□ -0.92
RPAIN-205ENST00000536255 MGPP08493 103 aa9.33□□□□□ -0.92
RPAIN-205ENST00000536255 EVI2AP22794 236 aa9.33□□□□□ -0.92
RPAIN-205ENST00000536255 RPL36AP83881 106 aaKnown RBP9.33□□□□□ -0.92
RPAIN-205ENST00000536255 LYPD5Q6UWN5 251 aa9.33□□□□□ -0.92
RPAIN-205ENST00000536255 RPL36ALQ969Q0 106 aaKnown RBP9.33□□□□□ -0.92
RPAIN-205ENST00000536255 KIF25-AS1Q9Y6Z4 181 aa9.33□□□□□ -0.92
RPAIN-205ENST00000536255 SMIM27A0A1W2PRY6 76 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 GAGE12JA6NER3 117 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 MT-ND4LP03901 98 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 TIRAPP58753 221 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 GAGE1Q13065 139 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 GAGE4Q13068 117 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 GAGE5Q13069 117 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 RIGQ13278 110 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 GAGE13Q4V321 117 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.32□□□□□ -0.92
RPAIN-205ENST00000536255 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 ATP6V0E2Q8NHE4 81 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 ANAPC16Q96DE5 110 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 SEC11CQ9BY50 192 aa9.32□□□□□ -0.92
RPAIN-205ENST00000536255 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
RPAIN-205ENST00000536255 TRBV7-3A0A075B6L6 115 aa9.31□□□□□ -0.92
RPAIN-205ENST00000536255 LINC00336Q6ZUF6 198 aa9.31□□□□□ -0.92
RPAIN-205ENST00000536255 GTSF1LQ9H1H1 148 aa9.31□□□□□ -0.92
RPAIN-205ENST00000536255 Q9H8V8 135 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms