RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 P0DMU3 169 aa10.46□□□□□ -0.73
LPCAT3-203ENST00000535479 FAM231AP0DMU4 169 aa10.46□□□□□ -0.73
LPCAT3-203ENST00000535479 FAM231CP0DMU5 169 aa10.46□□□□□ -0.73
LPCAT3-203ENST00000535479 RNASE3P12724 160 aaKnown RBP10.46□□□□□ -0.73
LPCAT3-203ENST00000535479 CEMP1Q6PRD7 247 aaPredicted RBP10.46□□□□□ -0.73
LPCAT3-203ENST00000535479 ZNF48Q96MX3 618 aaPredicted RBP10.46□□□□□ -0.73
LPCAT3-203ENST00000535479 RHPN1-AS1Q9BWJ2 59 aa10.46□□□□□ -0.73
LPCAT3-203ENST00000535479 IGHV4-61A0A0C4DH41 118 aa10.46□□□□□ -0.74
LPCAT3-203ENST00000535479 TSHBP01222 138 aa10.46□□□□□ -0.74
LPCAT3-203ENST00000535479 COX8CQ7Z4L0 72 aa10.46□□□□□ -0.74
LPCAT3-203ENST00000535479 KIR2DL4Q99706 377 aa10.46□□□□□ -0.74
LPCAT3-203ENST00000535479 TM2D2Q9BX73 214 aa10.46□□□□□ -0.74
LPCAT3-203ENST00000535479 MDFICQ9P1T7 246 aa10.46□□□□□ -0.74
LPCAT3-203ENST00000535479 MTORP42345 2549 aa10.45□□□□□ -0.74
LPCAT3-203ENST00000535479 TRBV7-3A0A075B6L6 115 aa10.45□□□□□ -0.74
LPCAT3-203ENST00000535479 CLEC2AQ6UVW9 174 aa10.45□□□□□ -0.74
LPCAT3-203ENST00000535479 KNCNA6PVL3 124 aa10.45□□□□□ -0.74
LPCAT3-203ENST00000535479 CRYGDP07320 174 aa10.45□□□□□ -0.74
LPCAT3-203ENST00000535479 EBI3Q14213 229 aa10.45□□□□□ -0.74
LPCAT3-203ENST00000535479 RRN3P1Q2M238 152 aa10.45□□□□□ -0.74
LPCAT3-203ENST00000535479 NBEAL2Q6ZNJ1 2754 aa10.45□□□□□ -0.74
LPCAT3-203ENST00000535479 HOXA3O43365 443 aaPredicted RBP10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 PROK1P58294 105 aa10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 C9orf47Q6ZRZ4 202 aa10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 PIFOQ8TCI5 191 aa10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 A8MZ25 164 aa10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 SMCPP49901 116 aaPredicted RBP10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 MINOS1Q5TGZ0 78 aa10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 NFE4Q86UQ8 179 aa10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 MINOS1-NBL1R4GNA1 71 aa10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 FHL3Q13643 280 aa10.44□□□□□ -0.74
LPCAT3-203ENST00000535479 SPINK13Q1W4C9 94 aa10.43□□□□□ -0.74
LPCAT3-203ENST00000535479 DPH3P1Q9H4G8 78 aa10.43□□□□□ -0.74
LPCAT3-203ENST00000535479 ZNF462Q96JM2 2506 aa10.43□□□□□ -0.74
LPCAT3-203ENST00000535479 FN1P02751 2386 aaKnown RBP10.43□□□□□ -0.74
LPCAT3-203ENST00000535479 IGHV4-39P01824 125 aa10.43□□□□□ -0.74
LPCAT3-203ENST00000535479 ZNF56Q15929 161 aa10.43□□□□□ -0.74
LPCAT3-203ENST00000535479 PSMG4Q5JS54 123 aa10.43□□□□□ -0.74
LPCAT3-203ENST00000535479 HIGD1BQ9P298 99 aa10.43□□□□□ -0.74
LPCAT3-203ENST00000535479 NBPF19A0A087WUL8 3843 aa10.43□□□□□ -0.74
LPCAT3-203ENST00000535479 PLNP26678 52 aa10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 SUMO4Q6EEV6 95 aa10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 Q6ZSV7 163 aa10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 SYT8Q8NBV8 401 aa10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 DUX3Q96PT4 197 aa10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 ACANP16112 2415 aa10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 AVPP01185 164 aa10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 ZNRF2Q8NHG8 242 aa10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 ITLN2Q8WWU7 325 aaPredicted RBP10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 TOMM6Q96B49 74 aa10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 SIGMAR1Q99720 223 aa10.42□□□□□ -0.74
LPCAT3-203ENST00000535479 TRAV21A0A0B4J279 112 aa10.41□□□□□ -0.74
LPCAT3-203ENST00000535479 TSPAN13O95857 204 aa10.41□□□□□ -0.74
LPCAT3-203ENST00000535479 GNLYP22749 145 aa10.41□□□□□ -0.74
LPCAT3-203ENST00000535479 C1orf122Q6ZSJ8 110 aa10.41□□□□□ -0.74
LPCAT3-203ENST00000535479 TRBV7-1A0A0A6YYK4 115 aa10.41□□□□□ -0.74
LPCAT3-203ENST00000535479 CRIP2P52943 208 aaPredicted RBP10.41□□□□□ -0.74
LPCAT3-203ENST00000535479 TRPT1Q86TN4 253 aaKnown RBP10.41□□□□□ -0.74
LPCAT3-203ENST00000535479 SCGB1C2P0DMR2 95 aa10.4□□□□□ -0.74
LPCAT3-203ENST00000535479 SDHAF1A6NFY7 115 aa10.4□□□□□ -0.74
LPCAT3-203ENST00000535479 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.74
LPCAT3-203ENST00000535479 TRAV2A0A0B4J234 112 aa10.4□□□□□ -0.75
LPCAT3-203ENST00000535479 RBAKDNA6NC62 111 aa10.4□□□□□ -0.75
LPCAT3-203ENST00000535479 FAM159AQ6UWV7 190 aa10.4□□□□□ -0.75
LPCAT3-203ENST00000535479 IGLV4-69A0A075B6H9 119 aa10.39□□□□□ -0.75
LPCAT3-203ENST00000535479 A0A0U1RRA0 63 aa10.39□□□□□ -0.75
LPCAT3-203ENST00000535479 MT-ATP8P03928 68 aa10.39□□□□□ -0.75
LPCAT3-203ENST00000535479 SMPXQ9UHP9 88 aa10.39□□□□□ -0.75
LPCAT3-203ENST00000535479 PRO0461Q9UI25 63 aa10.39□□□□□ -0.75
LPCAT3-203ENST00000535479 MOB4Q9Y3A3 225 aa10.39□□□□□ -0.75
LPCAT3-203ENST00000535479 LINC01546A6NGU7 62 aa10.39□□□□□ -0.75
LPCAT3-203ENST00000535479 KLRB1Q12918 225 aa10.39□□□□□ -0.75
LPCAT3-203ENST00000535479 DEFB136Q30KP8 78 aa10.39□□□□□ -0.75
LPCAT3-203ENST00000535479 NDUFS8O00217 210 aa10.38□□□□□ -0.75
LPCAT3-203ENST00000535479 ELANEP08246 267 aa10.38□□□□□ -0.75
LPCAT3-203ENST00000535479 ORMDL2Q53FV1 153 aa10.38□□□□□ -0.75
LPCAT3-203ENST00000535479 C9orf139Q6ZV77 190 aa10.38□□□□□ -0.75
LPCAT3-203ENST00000535479 U3KQE9 123 aa10.38□□□□□ -0.75
LPCAT3-203ENST00000535479 TCL1BO95988 128 aa10.38□□□□□ -0.75
LPCAT3-203ENST00000535479 IGHV4-30-2A0A087WSY4 118 aa10.37□□□□□ -0.75
LPCAT3-203ENST00000535479 IGHV3-38A0A0C4DH36 116 aa10.37□□□□□ -0.75
LPCAT3-203ENST00000535479 SOCS3O14543 225 aa10.37□□□□□ -0.75
LPCAT3-203ENST00000535479 FBXL19-AS1Q494R0 122 aa10.37□□□□□ -0.75
LPCAT3-203ENST00000535479 MRAP2Q96G30 205 aa10.37□□□□□ -0.75
LPCAT3-203ENST00000535479 DAND5Q8N907 189 aa10.37□□□□□ -0.75
LPCAT3-203ENST00000535479 DOPEY1Q5JWR5 2465 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 LINC00315P59091 139 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 SPXQ9BT56 116 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 IGHV1-69DA0A0B4J2H0 117 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 F8W1H4 67 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 IGHV1-69P01742 117 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 SYNJ2BPP57105 145 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 C18orf65Q6ZTR6 163 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 Q8N1Y9 231 aa10.36□□□□□ -0.75
LPCAT3-203ENST00000535479 IGHV3-16A0A0C4DH30 117 aa10.35□□□□□ -0.75
LPCAT3-203ENST00000535479 OOSP1A8MZH6 123 aa10.35□□□□□ -0.75
LPCAT3-203ENST00000535479 RAB9AP51151 201 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms