RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 DEFB130AP0DP74 79 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 NPPCP23582 126 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 PRSS3P35030 304 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 DAD1P61803 113 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 PMVKQ15126 192 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 ESRGQ1W209 222 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 TTC32Q5I0X7 151 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 AADACL3Q5VUY0 350 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 ZNF555Q8NEP9 628 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 OR5H6Q8NGV6 325 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 AP3S1Q92572 193 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 LSM10Q969L4 123 aaKnown RBP2.91□□□□□ -1.94
CASP4-213ENST00000534356 LINC00052Q96N35 136 aa2.91□□□□□ -1.94
CASP4-213ENST00000534356 TNXBP22105 4242 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 TRAV2A0A0B4J234 112 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 IRGMA1A4Y4 181 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 IFITM5A6NNB3 132 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 TMEM238C9JI98 176 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 TCAPO15273 167 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 NDUFS5O43920 106 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 PPYP01298 95 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 IGLV6-57P01721 117 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 CRYBB3P26998 211 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 ETV6P41212 452 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 NKX2-5P52952 324 aaPredicted RBP2.9□□□□□ -1.95
CASP4-213ENST00000534356 SSX1Q16384 188 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 OR4B1Q8NGF8 309 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 PRRT1Q99946 306 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 MND1Q9BWT6 205 aa2.9□□□□□ -1.95
CASP4-213ENST00000534356 TRAV12-2A0A075B6T6 113 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 A0A1B0GV72 72 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 RBFOX3A6NFN3 312 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 CCDC160A6NGH7 325 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 M0R2Z0 102 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 CRXO43186 299 aaPredicted RBP2.89□□□□□ -1.95
CASP4-213ENST00000534356 PMP2P02689 132 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 HLA-DRB4P13762 266 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 GADD45AP24522 165 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 HLA-DMAP28067 261 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 FAM78BQ5VT40 261 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 LINC00337Q8N6G1 96 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 STOML3Q8TAV4 291 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 SND1-IT1Q9HBX3 110 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 ZNF492Q9P255 531 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 HLA-DRB4X5D2U9 266 aa2.89□□□□□ -1.95
CASP4-213ENST00000534356 SMIM9A6NGZ8 99 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 LINC00587B1AMM8 73 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 M0R036 132 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 SNAPC5O75971 98 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 IGKV1-5P01602 117 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 HRES1P13985 223 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 HTN1P15515 57 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 CCL18P55774 89 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 PRCDQ00LT1 54 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 CD164Q04900 197 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 SPINK13Q1W4C9 94 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 IDNKQ5T6J7 187 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 FAM104BQ5XKR9 115 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 AMTNQ6UX39 209 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 PRNTQ86SH4 94 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 BAP18Q8IXM2 172 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 GPR146Q96CH1 333 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 PACRGQ96M98 296 aaPredicted RBP2.88□□□□□ -1.95
CASP4-213ENST00000534356 METTL26Q96S19 204 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 PFDN5Q99471 154 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 GINS3Q9BRX5 216 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 C2orf88Q9BSF0 95 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 PDCD10Q9BUL8 212 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 PARD6GQ9BYG4 376 aaPredicted RBP2.88□□□□□ -1.95
CASP4-213ENST00000534356 FXYD6Q9H0Q3 95 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 BIN3Q9NQY0 253 aa2.88□□□□□ -1.95
CASP4-213ENST00000534356 A0A087WTM6 91 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 IGLC1P0CG04 106 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 PET100P0DJ07 73 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 LGALS3P17931 250 aaKnown RBP2.87□□□□□ -1.95
CASP4-213ENST00000534356 PSMB2P49721 201 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 KRTAP10-4P60372 401 aaPredicted RBP2.87□□□□□ -1.95
CASP4-213ENST00000534356 HSPE1P61604 102 aaKnown RBP2.87□□□□□ -1.95
CASP4-213ENST00000534356 PSG9Q00887 426 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 CATR1Q13166 79 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 RRN3P1Q2M238 152 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 TRIQKQ629K1 86 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 TMED4Q7Z7H5 227 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 C8orf59Q8N0T1 100 aaPredicted RBP2.87□□□□□ -1.95
CASP4-213ENST00000534356 C15orf53Q8NAA6 179 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 OR4X1Q8NH49 305 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 TMEM56Q96MV1 263 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 MGLLQ99685 303 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 COMMD9Q9P000 198 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 RSL24D1Q9UHA3 163 aaKnown RBP2.87□□□□□ -1.95
CASP4-213ENST00000534356 PRNDQ9UKY0 176 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 ALG5Q9Y673 324 aa2.87□□□□□ -1.95
CASP4-213ENST00000534356 A0A096LPF7 62 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 TRAV1-2A0A0B4J238 106 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 A0A0J9YX75 114 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 TMEM189A5PLL7 270 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 TSTD3H0UI37 97 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 CYB5BO43169 146 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 ARL6IP5O75915 188 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 PPBPP02775 128 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms