RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 VWA8A3KMH1 1905 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 NOTCH3Q9UM47 2321 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 TRGV5A0A0B4J1U4 118 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 TRBV7-6A0A0J9YX20 115 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 CRYM-AS1A6NIL9 109 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 K7ERJ3 54 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 TCL1BO95988 128 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 GCHFRP30047 84 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 DYNLT3P51808 116 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 DEFB103AP81534 67 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 QRFPP83859 136 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 SP6Q3SY56 376 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 FBXL19-AS1Q494R0 122 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 LGALS9CQ6DKI2 356 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 RNF182Q8N6D2 247 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 DCAF4L2Q8NA75 395 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 AICDAQ9GZX7 198 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 C16orf95Q9H693 158 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 DAZ1Q9NQZ3 744 aaKnown RBP2.44□□□□□ -2.02
CSMD3-210ENST00000534172 LINC00527Q9UJ94 153 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 EPDR1Q9UM22 224 aa2.44□□□□□ -2.02
CSMD3-210ENST00000534172 AMMECR1Q9Y4X0 333 aaPredicted RBP2.44□□□□□ -2.02
CSMD3-210ENST00000534172 AGRNO00468 2067 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 TRAV17A0A0B4J275 112 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 hADV29S1A0JD25 119 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 C11orf94C9JXX5 98 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 PPYP01298 95 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 CCL8P80075 99 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 DAZ2Q13117 558 aaKnown RBP2.43□□□□□ -2.02
CSMD3-210ENST00000534172 RSPO1Q2MKA7 263 aaPredicted RBP2.43□□□□□ -2.02
CSMD3-210ENST00000534172 TMEM170BQ5T4T1 132 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 SCGB1D4Q6XE38 83 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 FAM19A3Q7Z5A8 133 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 DAZ4Q86SG3 579 aaKnown RBP2.43□□□□□ -2.02
CSMD3-210ENST00000534172 CLECL1Q8IZS7 167 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 WFDC11Q8NEX6 87 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 GPX7Q96SL4 187 aaPredicted RBP2.43□□□□□ -2.02
CSMD3-210ENST00000534172 LINC00597Q9H2U6 94 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 DPH3P1Q9H4G8 78 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 NXT2Q9NPJ8 142 aaKnown RBP2.43□□□□□ -2.02
CSMD3-210ENST00000534172 DAZ3Q9NR90 486 aaKnown RBP2.43□□□□□ -2.02
CSMD3-210ENST00000534172 DEC1Q9P2X7 70 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 HHLA3Q9XRX5 114 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 SMG1Q96Q15 3661 aaKnown RBP2.43□□□□□ -2.02
CSMD3-210ENST00000534172 TET1Q8NFU7 2136 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 PTPRQQ9UMZ3 2332 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 NPYP01303 97 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 MGST1P10620 155 aaKnown RBP2.43□□□□□ -2.02
CSMD3-210ENST00000534172 CTLA4P16410 223 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 UBE2D3P61077 147 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 HIST1H4AP62805 103 aaKnown RBP2.43□□□□□ -2.02
CSMD3-210ENST00000534172 UBE2D2P62837 147 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 GTF3C1Q12789 2109 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 ORMDL2Q53FV1 153 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 CEMP1Q6PRD7 247 aaPredicted RBP2.43□□□□□ -2.02
CSMD3-210ENST00000534172 ATP5L2Q7Z4Y8 100 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 PDPNQ86YL7 162 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 DEFB124Q8NES8 71 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 CYYR1Q96J86 154 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 NMNAT3Q96T66 252 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 TIMM17AQ99595 171 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 FAM60AQ9NP50 221 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 OSTCQ9NRP0 149 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 PCLOQ9Y6V0 5065 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 FRYLO94915 3013 aa2.43□□□□□ -2.02
CSMD3-210ENST00000534172 ITPR2Q14571 2701 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 EXPH5Q8NEV8 1989 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 LRRK2Q5S007 2527 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 OBSL1O75147 1896 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 MYMXA0A1B0GTQ4 84 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 WI2-2373I1.2A0A1W2PRP0 233 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 LGALS9O00182 355 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 TCRAP04437 139 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 ZNF136P52737 540 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 HERVK_113P61574 105 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 DAD1P61803 113 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 LINC00305Q7Z4B0 112 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 VN1R4Q7Z5H5 301 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 PCP2Q8IVA1 136 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 SERP2Q8N6R1 65 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 C10orf105Q8TEF2 133 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 V9GYV3 84 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 USP9YO00507 2555 aaPredicted RBP2.42□□□□□ -2.02
CSMD3-210ENST00000534172 TNRC6BQ9UPQ9 1833 aaKnown RBP2.42□□□□□ -2.02
CSMD3-210ENST00000534172 DOCK8Q8NF50 2099 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 VPS13AQ96RL7 3174 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 NUMA1Q14980 2115 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 IGHV3OR15-7A0A075B7D8 119 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 SMIM27A0A1W2PRY6 76 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 SYNGR2O43760 224 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 SLC25A20O43772 301 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 IGLV2-23P01705 113 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 CXCL8P10145 99 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 LINC00643Q86TS7 51 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 MDP1Q86V88 176 aa2.42□□□□□ -2.02
CSMD3-210ENST00000534172 SVILO95425 2214 aa2.41□□□□□ -2.02
CSMD3-210ENST00000534172 DMDP11532 3685 aa2.41□□□□□ -2.02
CSMD3-210ENST00000534172 COL4A2P08572 1712 aa2.41□□□□□ -2.02
CSMD3-210ENST00000534172 PDZD2O15018 2839 aa2.41□□□□□ -2.02
CSMD3-210ENST00000534172 IGKV6D-21A0A0A0MT36 114 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms