RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 MBD3L2Q8NHZ7 208 aaPredicted RBP6.19□□□□□ -1.42
CSRP1-218ENST00000533402 HIVEP2P31629 2446 aa6.19□□□□□ -1.42
CSRP1-218ENST00000533402 MLST8Q9BVC4 326 aa6.19□□□□□ -1.42
CSRP1-218ENST00000533402 SIGLEC9Q9Y336 463 aa6.19□□□□□ -1.42
CSRP1-218ENST00000533402 TRAV4A0A0B4J268 109 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 NDUFC1O43677 76 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 SRRM5B3KS81 715 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 C14orf177Q52M58 125 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 PRRC2AP48634 2157 aaKnown RBP6.18□□□□□ -1.42
CSRP1-218ENST00000533402 IGHV1-69DA0A0B4J2H0 117 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 CD177Q8N6Q3 437 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 GATA1P15976 413 aaPredicted RBP6.18□□□□□ -1.42
CSRP1-218ENST00000533402 UBE2E1P51965 193 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 UBE2BP63146 152 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 C1orf147Q96MC9 270 aaPredicted RBP6.18□□□□□ -1.42
CSRP1-218ENST00000533402 IGHV1-3A0A0C4DH29 117 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 PIP4P1Q86T03 277 aa6.18□□□□□ -1.42
CSRP1-218ENST00000533402 COX7B2Q8TF08 81 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 NDUFA4L2Q9NRX3 87 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 MDS2Q8NDY4 140 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 PROP1O75360 226 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 FRMD6-AS1P0C7T7 363 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 DEFB113Q30KQ7 82 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 UBE2E2Q96LR5 201 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 TNRC6BQ9UPQ9 1833 aaKnown RBP6.17□□□□□ -1.42
CSRP1-218ENST00000533402 BDP1A6H8Y1 2624 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 NAV3Q8IVL0 2385 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 ZNF503Q96F45 646 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 A0A0G2JNJ9 132 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 PRR20EP86478 221 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 PRR20CP86479 221 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 PRR20DP86480 221 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 PRR20BP86481 221 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 PRR20AP86496 221 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 Q6ZR03 302 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 Q9UFV3 132 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 SND1-IT1Q9HBX3 110 aa6.17□□□□□ -1.42
CSRP1-218ENST00000533402 IGHV4-28A0A0C4DH34 117 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 LYRM9A8MSI8 78 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 TMEM178BH3BS89 294 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 DEFB130BP0DP73 79 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 DEFB130AP0DP74 79 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 RPL18AQ02543 176 aaKnown RBP6.16□□□□□ -1.42
CSRP1-218ENST00000533402 BPESC1Q9GZL8 116 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 OPRPNQ99935 248 aaPredicted RBP6.16□□□□□ -1.42
CSRP1-218ENST00000533402 TMEM200BQ69YZ2 307 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 THAP8Q8NA92 274 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 IGF2BP2-AS1Q96M15 143 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 A6NED7 52 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.16□□□□□ -1.42
CSRP1-218ENST00000533402 NDUFA4O00483 81 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 LECT2O14960 151 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 Q0VFX4 171 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 PTPRQQ9UMZ3 2332 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 K7EM74 188 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 ATP5EP2Q5VTU8 51 aa6.16□□□□□ -1.42
CSRP1-218ENST00000533402 MUC22E2RYF6 1773 aaPredicted RBP6.16□□□□□ -1.42
CSRP1-218ENST00000533402 ADAMTS20P59510 1910 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 H3BQ85 93 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 IGHV1-69P01742 117 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 IGHV1-8P0DP01 117 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 DAND5Q8N907 189 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 IGHV1-46P01743 117 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 Q6Q795 121 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 IGHV1-18A0A0C4DH31 117 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 FHL1Q13642 323 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 DSCAMO60469 2012 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 INSL3P51460 131 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 NRGNQ92686 78 aa6.15□□□□□ -1.42
CSRP1-218ENST00000533402 H3BRN7 92 aa6.15□□□□□ -1.43
CSRP1-218ENST00000533402 TMEM256-PLSCR3K7ERE1 68 aa6.15□□□□□ -1.43
CSRP1-218ENST00000533402 DAZ2Q13117 558 aaKnown RBP6.15□□□□□ -1.43
CSRP1-218ENST00000533402 DAZ4Q86SG3 579 aaKnown RBP6.15□□□□□ -1.43
CSRP1-218ENST00000533402 DAZ3Q9NR90 486 aaKnown RBP6.15□□□□□ -1.43
CSRP1-218ENST00000533402 CLPSP04118 112 aa6.15□□□□□ -1.43
CSRP1-218ENST00000533402 FOXE3Q13461 319 aa6.15□□□□□ -1.43
CSRP1-218ENST00000533402 NOTCH2Q04721 2471 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 WI2-2373I1.2A0A1W2PRP0 233 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 IGHV3-16A0A0C4DH30 117 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 H3BUA1 57 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 KIR2DL5BQ8NHK3 375 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 YPEL4Q96NS1 127 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 PPDPFQ9H3Y8 114 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 ENHOQ6UWT2 76 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 FOXL2NBQ6ZUU3 175 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 SAA4P35542 130 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 CFAP126Q5VTH2 177 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 Q9HAA7 133 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 DEFB105AQ8NG35 78 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 RPL39LQ96EH5 51 aaKnown RBP6.14□□□□□ -1.43
CSRP1-218ENST00000533402 SERP1Q9Y6X1 66 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 SONP18583 2426 aaKnown RBP6.14□□□□□ -1.43
CSRP1-218ENST00000533402 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
CSRP1-218ENST00000533402 CCDC168Q8NDH2 2452 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 USP17L23D6RBM5 183 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 SPRR3Q9UBC9 169 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 SNURFQ9Y675 71 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms