RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TSPOP30536 169 aa13.55□□□□□ -0.24
SMPD1-208ENST00000533123 TRPT1Q86TN4 253 aaKnown RBP13.55□□□□□ -0.24
SMPD1-208ENST00000533123 PMCHL1Q16048 86 aa13.55□□□□□ -0.24
SMPD1-208ENST00000533123 A8MTW9 85 aa13.54□□□□□ -0.24
SMPD1-208ENST00000533123 S100A4P26447 101 aaKnown RBP13.54□□□□□ -0.24
SMPD1-208ENST00000533123 ASIPP42127 132 aa13.54□□□□□ -0.24
SMPD1-208ENST00000533123 ORAOV1Q8WV07 137 aa13.54□□□□□ -0.24
SMPD1-208ENST00000533123 MRPS16Q9Y3D3 137 aaKnown RBP13.54□□□□□ -0.24
SMPD1-208ENST00000533123 RPL35AP18077 110 aaKnown RBP13.54□□□□□ -0.24
SMPD1-208ENST00000533123 MRPL51Q4U2R6 128 aaKnown RBP13.54□□□□□ -0.24
SMPD1-208ENST00000533123 TMEM191AQ9H0A3 160 aa13.54□□□□□ -0.24
SMPD1-208ENST00000533123 D6R8Y8 96 aa13.53□□□□□ -0.24
SMPD1-208ENST00000533123 HSBP1O75506 76 aa13.53□□□□□ -0.24
SMPD1-208ENST00000533123 SPANXN1Q5VSR9 72 aa13.53□□□□□ -0.24
SMPD1-208ENST00000533123 FAM159AQ6UWV7 190 aa13.53□□□□□ -0.24
SMPD1-208ENST00000533123 URB1-AS1Q96HZ7 61 aa13.53□□□□□ -0.24
SMPD1-208ENST00000533123 DNAH3Q8TD57 4116 aa13.53□□□□□ -0.24
SMPD1-208ENST00000533123 C20orf202A1L168 122 aa13.52□□□□□ -0.24
SMPD1-208ENST00000533123 RNASE3P12724 160 aaKnown RBP13.52□□□□□ -0.24
SMPD1-208ENST00000533123 RNASEKQ6P5S7 137 aaKnown RBP13.52□□□□□ -0.24
SMPD1-208ENST00000533123 RNF185Q96GF1 192 aa13.52□□□□□ -0.24
SMPD1-208ENST00000533123 TRAV9-2A0A087WT02 112 aa13.52□□□□□ -0.25
SMPD1-208ENST00000533123 SMKR1H3BMG3 65 aa13.52□□□□□ -0.25
SMPD1-208ENST00000533123 CCL25O15444 150 aa13.52□□□□□ -0.25
SMPD1-208ENST00000533123 EVI2AP22794 236 aa13.52□□□□□ -0.25
SMPD1-208ENST00000533123 CLUHP3Q96NS8 147 aa13.52□□□□□ -0.25
SMPD1-208ENST00000533123 M0R381 172 aa13.51□□□□□ -0.25
SMPD1-208ENST00000533123 HINT1P49773 126 aaPredicted RBP13.51□□□□□ -0.25
SMPD1-208ENST00000533123 IGHV4-4A0A075B6R2 117 aa13.51□□□□□ -0.25
SMPD1-208ENST00000533123 NCR2O95944 276 aa13.51□□□□□ -0.25
SMPD1-208ENST00000533123 RBMY1A1P0DJD3 496 aaKnown RBP13.51□□□□□ -0.25
SMPD1-208ENST00000533123 RBMY1CP0DJD4 496 aa13.51□□□□□ -0.25
SMPD1-208ENST00000533123 RBMY1FQ15415 496 aaKnown RBP13.51□□□□□ -0.25
SMPD1-208ENST00000533123 CRXO43186 299 aaPredicted RBP13.5□□□□□ -0.25
SMPD1-208ENST00000533123 CACNG7P62955 275 aa13.5□□□□□ -0.25
SMPD1-208ENST00000533123 Q6ZVH6 145 aa13.5□□□□□ -0.25
SMPD1-208ENST00000533123 SCRT2Q9NQ03 307 aa13.5□□□□□ -0.25
SMPD1-208ENST00000533123 U3KQK5 164 aa13.5□□□□□ -0.25
SMPD1-208ENST00000533123 GAS8-AS1O95177 125 aa13.49□□□□□ -0.25
SMPD1-208ENST00000533123 PHLDA3Q9Y5J5 127 aa13.49□□□□□ -0.25
SMPD1-208ENST00000533123 PTTG1IPP53801 180 aa13.49□□□□□ -0.25
SMPD1-208ENST00000533123 C21orf62-AS1Q17RA5 79 aa13.49□□□□□ -0.25
SMPD1-208ENST00000533123 SPATA12Q7Z6I5 190 aa13.49□□□□□ -0.25
SMPD1-208ENST00000533123 ORMDL3Q8N138 153 aa13.49□□□□□ -0.25
SMPD1-208ENST00000533123 XCL2Q9UBD3 114 aa13.49□□□□□ -0.25
SMPD1-208ENST00000533123 COX11Q9Y6N1 276 aa13.49□□□□□ -0.25
SMPD1-208ENST00000533123 PRB2P02812 416 aaPredicted RBP13.48□□□□□ -0.25
SMPD1-208ENST00000533123 IGHV4-30-4P0DP06 118 aa13.48□□□□□ -0.25
SMPD1-208ENST00000533123 PCP4P48539 62 aa13.48□□□□□ -0.25
SMPD1-208ENST00000533123 PRELID3AQ96N28 172 aa13.48□□□□□ -0.25
SMPD1-208ENST00000533123 MUC4Q99102 2169 aa13.48□□□□□ -0.25
SMPD1-208ENST00000533123 CKS2P33552 79 aa13.48□□□□□ -0.25
SMPD1-208ENST00000533123 NBEAL2Q6ZNJ1 2754 aa13.47□□□□□ -0.25
SMPD1-208ENST00000533123 MED14OSP0DP75 135 aa13.47□□□□□ -0.25
SMPD1-208ENST00000533123 IGHV1OR15-1A0A075B7D0 117 aa13.47□□□□□ -0.25
SMPD1-208ENST00000533123 GIG44P09565 113 aaPredicted RBP13.47□□□□□ -0.25
SMPD1-208ENST00000533123 UBE2V1Q13404 147 aa13.47□□□□□ -0.25
SMPD1-208ENST00000533123 MDFICQ9P1T7 246 aa13.47□□□□□ -0.25
SMPD1-208ENST00000533123 IGHV3-16A0A0C4DH30 117 aa13.46□□□□□ -0.25
SMPD1-208ENST00000533123 NPYP01303 97 aa13.46□□□□□ -0.25
SMPD1-208ENST00000533123 LOC389332A0A1B0GUA5 103 aa13.45□□□□□ -0.26
SMPD1-208ENST00000533123 GATA1P15976 413 aaPredicted RBP13.45□□□□□ -0.26
SMPD1-208ENST00000533123 RNASE8Q8TDE3 154 aaKnown RBP13.45□□□□□ -0.26
SMPD1-208ENST00000533123 TRAV26-2A0A0B4J265 109 aa13.45□□□□□ -0.26
SMPD1-208ENST00000533123 KPRPQ5T749 579 aaPredicted RBP13.45□□□□□ -0.26
SMPD1-208ENST00000533123 SMIM15Q7Z3B0 74 aa13.45□□□□□ -0.26
SMPD1-208ENST00000533123 CSTL1Q9H114 145 aa13.45□□□□□ -0.26
SMPD1-208ENST00000533123 PRM2P04554 102 aa13.44□□□□□ -0.26
SMPD1-208ENST00000533123 TMEM70Q9BUB7 260 aa13.44□□□□□ -0.26
SMPD1-208ENST00000533123 HTN1P15515 57 aa13.44□□□□□ -0.26
SMPD1-208ENST00000533123 IFI27P40305 119 aaPredicted RBP13.44□□□□□ -0.26
SMPD1-208ENST00000533123 MORN3Q6PF18 240 aaPredicted RBP13.44□□□□□ -0.26
SMPD1-208ENST00000533123 C14orf178Q8N769 122 aaPredicted RBP13.44□□□□□ -0.26
SMPD1-208ENST00000533123 INSP01308 110 aa13.43□□□□□ -0.26
SMPD1-208ENST00000533123 RBX1P62877 108 aa13.43□□□□□ -0.26
SMPD1-208ENST00000533123 CHCHD1Q96BP2 118 aaKnown RBP13.43□□□□□ -0.26
SMPD1-208ENST00000533123 IGHV1-24A0A0C4DH33 117 aa13.43□□□□□ -0.26
SMPD1-208ENST00000533123 NXPH4O95158 308 aa13.43□□□□□ -0.26
SMPD1-208ENST00000533123 C9orf85Q96MD7 179 aa13.43□□□□□ -0.26
SMPD1-208ENST00000533123 CBY3A6NI87 242 aa13.42□□□□□ -0.26
SMPD1-208ENST00000533123 PRSS3P2Q8NHM4 247 aa13.42□□□□□ -0.26
SMPD1-208ENST00000533123 TP73-AS1Q9UF72 201 aa13.42□□□□□ -0.26
SMPD1-208ENST00000533123 K7EP13 123 aa13.41□□□□□ -0.26
SMPD1-208ENST00000533123 IGHV3OR16-12A0A075B7B8 117 aa13.41□□□□□ -0.26
SMPD1-208ENST00000533123 PPBPP02775 128 aa13.41□□□□□ -0.26
SMPD1-208ENST00000533123 C1QTNF4Q9BXJ3 329 aa13.41□□□□□ -0.26
SMPD1-208ENST00000533123 JPT2Q9H910 190 aa13.41□□□□□ -0.26
SMPD1-208ENST00000533123 TNFRSF6BO95407 300 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 LINC00173Q6ZV60 143 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 C1orf158Q8N1D5 194 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 CSNK1G2-AS1Q8NCQ2 148 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 ST20Q9HBF5 79 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 SYS1-DBNDD2H3BUS1 97 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 FA2HQ7L5A8 372 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 AP1S3Q96PC3 154 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 LINC01587Q99440 93 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 DPH3P1Q9H4G8 78 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 AP5S1Q9NUS5 200 aa13.4□□□□□ -0.26
SMPD1-208ENST00000533123 APOC4P55056 127 aa13.39□□□□□ -0.27
SMPD1-208ENST00000533123 KIR2DL5BQ8NHK3 375 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms