RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FAM231BA6NCW3 169 aa7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 A8MWL6 223 aa7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 F5H768 121 aa7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 HLA-DQA1P01909 254 aa7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 MED14OSP0DP75 135 aa7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 ATP5L2Q7Z4Y8 100 aa7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 SYT8Q8NBV8 401 aa7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 NDUFAF3Q9BU61 184 aa7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 GNB1LQ9BYB4 327 aa7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 RPP21Q9H633 154 aaKnown RBP7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 NAT8BQ9UHF3 227 aa7.95□□□□□ -1.14
TRAPPC4-211ENST00000533012 SMIM27A0A1W2PRY6 76 aa7.94□□□□□ -1.14
TRAPPC4-211ENST00000533012 IGLL5B9A064 214 aa7.94□□□□□ -1.14
TRAPPC4-211ENST00000533012 PIK3CD-AS1Q5SR53 167 aa7.94□□□□□ -1.14
TRAPPC4-211ENST00000533012 LINC00518Q8N0U6 118 aa7.94□□□□□ -1.14
TRAPPC4-211ENST00000533012 OR4C5Q8NGB2 326 aa7.94□□□□□ -1.14
TRAPPC4-211ENST00000533012 FRZBQ92765 325 aa7.94□□□□□ -1.14
TRAPPC4-211ENST00000533012 SSBP4Q9BWG4 385 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC4-211ENST00000533012 GFRA4Q9GZZ7 299 aa7.94□□□□□ -1.14
TRAPPC4-211ENST00000533012 SCRT2Q9NQ03 307 aa7.94□□□□□ -1.14
TRAPPC4-211ENST00000533012 TRAV4A0A0B4J268 109 aa7.93□□□□□ -1.14
TRAPPC4-211ENST00000533012 F2Z2F3 143 aa7.93□□□□□ -1.14
TRAPPC4-211ENST00000533012 IGHV3-53P01767 116 aa7.93□□□□□ -1.14
TRAPPC4-211ENST00000533012 OR5AL1P0C617 328 aa7.93□□□□□ -1.14
TRAPPC4-211ENST00000533012 GZMBP10144 247 aa7.93□□□□□ -1.14
TRAPPC4-211ENST00000533012 COA6Q5JTJ3 125 aaKnown RBP7.93□□□□□ -1.14
TRAPPC4-211ENST00000533012 DMRTA1Q5VZB9 504 aa7.93□□□□□ -1.14
TRAPPC4-211ENST00000533012 FER1L6-AS1Q8NA97 138 aa7.93□□□□□ -1.14
TRAPPC4-211ENST00000533012 TSKUQ8WUA8 353 aa7.93□□□□□ -1.14
TRAPPC4-211ENST00000533012 A8MWV9 139 aa7.92□□□□□ -1.14
TRAPPC4-211ENST00000533012 M0R381 172 aa7.92□□□□□ -1.14
TRAPPC4-211ENST00000533012 SNAI2O43623 268 aa7.92□□□□□ -1.14
TRAPPC4-211ENST00000533012 CIDEAO60543 219 aa7.92□□□□□ -1.14
TRAPPC4-211ENST00000533012 TCTAP57738 103 aa7.92□□□□□ -1.14
TRAPPC4-211ENST00000533012 SLAQ13239 276 aa7.92□□□□□ -1.14
TRAPPC4-211ENST00000533012 SPANXN1Q5VSR9 72 aa7.92□□□□□ -1.14
TRAPPC4-211ENST00000533012 POM121L12Q8N7R1 296 aa7.92□□□□□ -1.14
TRAPPC4-211ENST00000533012 TPPP3Q9BW30 176 aa7.92□□□□□ -1.14
TRAPPC4-211ENST00000533012 DYNC2H1Q8NCM8 4307 aaKnown RBP7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 TRGV4A0A0C4DH28 118 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 A0A1B0GW15 77 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 RS1O15537 224 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 IGLC6P0CF74 106 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 SSTP61278 116 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 FHL2Q14192 279 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 CFAP126Q5VTH2 177 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 OR10AG1Q8NH19 301 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 TMEM18Q96B42 140 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 BORCS7Q96B45 105 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 ZNF479Q96JC4 524 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 C12orf57Q99622 126 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 HHLA3Q9XRX5 114 aa7.91□□□□□ -1.14
TRAPPC4-211ENST00000533012 IGHV4-4A0A075B6R2 117 aa7.9□□□□□ -1.14
TRAPPC4-211ENST00000533012 PHOX2AO14813 284 aa7.9□□□□□ -1.14
TRAPPC4-211ENST00000533012 CACNG7P62955 275 aa7.9□□□□□ -1.14
TRAPPC4-211ENST00000533012 S100A12P80511 92 aa7.9□□□□□ -1.14
TRAPPC4-211ENST00000533012 LYZL1Q6UWQ5 148 aa7.9□□□□□ -1.14
TRAPPC4-211ENST00000533012 MRPL18Q9H0U6 180 aaKnown RBP7.9□□□□□ -1.14
TRAPPC4-211ENST00000533012 PRO0255Q9UI72 69 aa7.9□□□□□ -1.14
TRAPPC4-211ENST00000533012 TRAV26-1A0A087WT03 109 aa7.89□□□□□ -1.15
TRAPPC4-211ENST00000533012 MUC21A0A0G2JKD1 596 aa7.89□□□□□ -1.15
TRAPPC4-211ENST00000533012 MUC21A0A140T8X8 626 aa7.89□□□□□ -1.15
TRAPPC4-211ENST00000533012 RAB4BP61018 213 aa7.89□□□□□ -1.15
TRAPPC4-211ENST00000533012 ZFP2Q6ZN57 461 aa7.89□□□□□ -1.15
TRAPPC4-211ENST00000533012 HIST3H2BBQ8N257 126 aa7.89□□□□□ -1.15
TRAPPC4-211ENST00000533012 GTSF1Q8WW33 167 aa7.89□□□□□ -1.15
TRAPPC4-211ENST00000533012 APLNQ9ULZ1 77 aa7.89□□□□□ -1.15
TRAPPC4-211ENST00000533012 STARD9Q9P2P6 4700 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 PLECQ15149 4684 aaKnown RBP7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 IGHV3-73A0A0B4J1V6 119 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 A0A0J9YY99 117 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 H3BNG1 76 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 PAX4O43316 350 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 NXPH4O95158 308 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 NTF3P20783 257 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 CRYBA4P53673 196 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 FOXA3P55318 350 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 HBBP68871 147 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 OR10J3Q5JRS4 329 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 C15orf53Q8NAA6 179 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 JPT2Q9H910 190 aa7.88□□□□□ -1.15
TRAPPC4-211ENST00000533012 HIGD1CA8MV81 97 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 RHODO00212 210 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 NUDT3O95989 172 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 APCSP02743 223 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 SMIM17P0DL12 118 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 CTRLP40313 264 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 Q0VG73 95 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 RIGQ13278 110 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 TWIST1Q15672 202 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 FAM74A4Q5TZK3 123 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 PGLYRP4Q96LB8 373 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 PACRGQ96M98 296 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 SAMD10Q9BYL1 202 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 CSMD3Q7Z407 3707 aa7.87□□□□□ -1.15
TRAPPC4-211ENST00000533012 A0A087WWL8 130 aa7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 TRBV6-4A0A1B0GX49 114 aa7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 CRYGDP07320 174 aa7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 FABP4P15090 132 aa7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 GATA1P15976 413 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms