RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 RPL32P62910 135 aaKnown RBP13.48□□□□□ -0.25
UBXN1-213ENST00000532904 SCGB1A1P11684 91 aa13.48□□□□□ -0.25
UBXN1-213ENST00000532904 SVEP1Q4LDE5 3571 aa13.48□□□□□ -0.25
UBXN1-213ENST00000532904 SH2D6Q7Z4S9 175 aa13.48□□□□□ -0.25
UBXN1-213ENST00000532904 SIGMAR1Q99720 223 aa13.48□□□□□ -0.25
UBXN1-213ENST00000532904 CELSR2Q9HCU4 2923 aa13.48□□□□□ -0.25
UBXN1-213ENST00000532904 TSSC4Q9Y5U2 329 aaPredicted RBP13.48□□□□□ -0.25
UBXN1-213ENST00000532904 KIF25-AS1Q9Y6Z4 181 aa13.48□□□□□ -0.25
UBXN1-213ENST00000532904 ZNF815PA8K554 130 aa13.47□□□□□ -0.25
UBXN1-213ENST00000532904 F6UB75 175 aa13.47□□□□□ -0.25
UBXN1-213ENST00000532904 IGHV4-59P01825 116 aa13.47□□□□□ -0.25
UBXN1-213ENST00000532904 ETDBQ3ZM63 59 aa13.47□□□□□ -0.25
UBXN1-213ENST00000532904 MAPK1IP1LQ8NDC0 245 aa13.47□□□□□ -0.25
UBXN1-213ENST00000532904 IGHV4OR15-8A0A075B7B6 117 aa13.46□□□□□ -0.25
UBXN1-213ENST00000532904 A0A087WW49 117 aa13.46□□□□□ -0.25
UBXN1-213ENST00000532904 GAGE12HA6NDE8 117 aa13.46□□□□□ -0.25
UBXN1-213ENST00000532904 CRYGDP07320 174 aa13.46□□□□□ -0.25
UBXN1-213ENST00000532904 LINC00315P59091 139 aa13.46□□□□□ -0.25
UBXN1-213ENST00000532904 SCGB2A2Q13296 93 aa13.46□□□□□ -0.25
UBXN1-213ENST00000532904 SPAG8Q99932 426 aaPredicted RBP13.46□□□□□ -0.25
UBXN1-213ENST00000532904 POLQO75417 2590 aa13.46□□□□□ -0.26
UBXN1-213ENST00000532904 TMEM238LA0A1B0GVL6 79 aa13.46□□□□□ -0.26
UBXN1-213ENST00000532904 A6NJY4 79 aa13.46□□□□□ -0.26
UBXN1-213ENST00000532904 DUSP14O95147 198 aaKnown RBP13.46□□□□□ -0.26
UBXN1-213ENST00000532904 AZU1P20160 251 aa13.46□□□□□ -0.26
UBXN1-213ENST00000532904 Q6ZS46 218 aa13.46□□□□□ -0.26
UBXN1-213ENST00000532904 TMEM89A2RUT3 159 aa13.45□□□□□ -0.26
UBXN1-213ENST00000532904 LINC01549A6NIU2 74 aa13.45□□□□□ -0.26
UBXN1-213ENST00000532904 PLEKHB2Q96CS7 222 aa13.45□□□□□ -0.26
UBXN1-213ENST00000532904 SPATA25Q9BR10 227 aa13.45□□□□□ -0.26
UBXN1-213ENST00000532904 PF4V1P10720 104 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 UBE2D1P51668 147 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 RPL11P62913 178 aaKnown RBP13.44□□□□□ -0.26
UBXN1-213ENST00000532904 KRTAP1-3Q8IUG1 177 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 GTSF1LQ9H1H1 148 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 PGPEP1Q9NXJ5 209 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 NAV2Q8IVL1 2488 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 IGLV4-69A0A075B6H9 119 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 TSHBP01222 138 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 PAPPA-AS1Q5QFB9 102 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 Q6YL49 198 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 Q96MF0 132 aa13.44□□□□□ -0.26
UBXN1-213ENST00000532904 IGIPA6NJ69 53 aa13.43□□□□□ -0.26
UBXN1-213ENST00000532904 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
UBXN1-213ENST00000532904 RHPN1-AS1Q9BWJ2 59 aa13.43□□□□□ -0.26
UBXN1-213ENST00000532904 VPREB3Q9UKI3 123 aa13.43□□□□□ -0.26
UBXN1-213ENST00000532904 C11orf86A6NJI1 115 aa13.43□□□□□ -0.26
UBXN1-213ENST00000532904 KLLNB2CW77 178 aa13.43□□□□□ -0.26
UBXN1-213ENST00000532904 IGHV3-11P01762 117 aa13.43□□□□□ -0.26
UBXN1-213ENST00000532904 POLR2KP53803 58 aaKnown RBP13.43□□□□□ -0.26
UBXN1-213ENST00000532904 MRPL16Q9NX20 251 aaKnown RBP13.43□□□□□ -0.26
UBXN1-213ENST00000532904 PLA2G2AP14555 144 aa13.42□□□□□ -0.26
UBXN1-213ENST00000532904 ZFP2Q6ZN57 461 aa13.42□□□□□ -0.26
UBXN1-213ENST00000532904 MTURNQ8N3F0 131 aa13.42□□□□□ -0.26
UBXN1-213ENST00000532904 TP53TG1Q9Y2A0 90 aa13.42□□□□□ -0.26
UBXN1-213ENST00000532904 HERVK_113P61574 105 aa13.41□□□□□ -0.26
UBXN1-213ENST00000532904 SRSF9Q13242 221 aaKnown RBP eCLIP13.41□□□□□ -0.26
UBXN1-213ENST00000532904 TMEM141Q96I45 108 aa13.41□□□□□ -0.26
UBXN1-213ENST00000532904 MAP1AP78559 2803 aaPredicted RBP13.41□□□□□ -0.26
UBXN1-213ENST00000532904 CENPEQ02224 2701 aa13.41□□□□□ -0.26
UBXN1-213ENST00000532904 IGKV3-7A0A075B6H7 116 aa13.41□□□□□ -0.26
UBXN1-213ENST00000532904 J3QKU1 62 aa13.41□□□□□ -0.26
UBXN1-213ENST00000532904 PMVKQ15126 192 aa13.41□□□□□ -0.26
UBXN1-213ENST00000532904 SUMO4Q6EEV6 95 aa13.41□□□□□ -0.26
UBXN1-213ENST00000532904 LCNL1Q6ZST4 164 aa13.41□□□□□ -0.26
UBXN1-213ENST00000532904 KLHL30-AS1Q8NEE0 82 aa13.41□□□□□ -0.26
UBXN1-213ENST00000532904 ABCA12Q86UK0 2595 aa13.41□□□□□ -0.26
UBXN1-213ENST00000532904 KMT2BQ9UMN6 2715 aaPredicted RBP13.4□□□□□ -0.26
UBXN1-213ENST00000532904 CELSR1Q9NYQ6 3014 aa13.4□□□□□ -0.26
UBXN1-213ENST00000532904 PSMB8P28062 276 aa13.4□□□□□ -0.26
UBXN1-213ENST00000532904 DLX4Q92988 240 aaPredicted RBP13.4□□□□□ -0.26
UBXN1-213ENST00000532904 VCYO14598 125 aa13.4□□□□□ -0.27
UBXN1-213ENST00000532904 TSPAN13O95857 204 aa13.4□□□□□ -0.27
UBXN1-213ENST00000532904 CD7P09564 240 aa13.4□□□□□ -0.27
UBXN1-213ENST00000532904 SMAGPQ0VAQ4 97 aa13.4□□□□□ -0.27
UBXN1-213ENST00000532904 CFAP126Q5VTH2 177 aa13.4□□□□□ -0.27
UBXN1-213ENST00000532904 FAM159AQ6UWV7 190 aa13.4□□□□□ -0.27
UBXN1-213ENST00000532904 TIMM17AQ99595 171 aa13.4□□□□□ -0.27
UBXN1-213ENST00000532904 CREBBPQ92793 2442 aa13.39□□□□□ -0.27
UBXN1-213ENST00000532904 A0A0J9YY99 117 aa13.39□□□□□ -0.27
UBXN1-213ENST00000532904 JPT2Q9H910 190 aa13.39□□□□□ -0.27
UBXN1-213ENST00000532904 DAZ1Q9NQZ3 744 aaKnown RBP13.39□□□□□ -0.27
UBXN1-213ENST00000532904 ATP6V0E2Q8NHE4 81 aa13.38□□□□□ -0.27
UBXN1-213ENST00000532904 KIR2DL4Q99706 377 aa13.38□□□□□ -0.27
UBXN1-213ENST00000532904 MUC4Q99102 2169 aa13.38□□□□□ -0.27
UBXN1-213ENST00000532904 INSL3P51460 131 aa13.38□□□□□ -0.27
UBXN1-213ENST00000532904 UBE2D3P61077 147 aa13.38□□□□□ -0.27
UBXN1-213ENST00000532904 UBE2D2P62837 147 aa13.38□□□□□ -0.27
UBXN1-213ENST00000532904 TEX29Q8N6K0 151 aa13.38□□□□□ -0.27
UBXN1-213ENST00000532904 DOPEY2Q9Y3R5 2298 aa13.38□□□□□ -0.27
UBXN1-213ENST00000532904 SMCPP49901 116 aaPredicted RBP13.37□□□□□ -0.27
UBXN1-213ENST00000532904 RPL39P62891 51 aaKnown RBP13.37□□□□□ -0.27
UBXN1-213ENST00000532904 TRBV6-5A0A0K0K1A5 114 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 LGALS9O00182 355 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 APOMO95445 188 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 ID1P41134 155 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 EMP1P54849 157 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 TMEM95Q3KNT9 176 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 C1QTNF4Q9BXJ3 329 aa13.36□□□□□ -0.27
UBXN1-213ENST00000532904 ZFHX3Q15911 3703 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms