RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 Q8N8P6 123 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 LINC00587B1AMM8 73 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 PRSS29PA6NIE9 313 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 NXPH4O95158 308 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 TMEM263Q8WUH6 116 aaKnown RBP6.03□□□□□ -1.44
CTNND1-230ENST00000532245 CHAC1Q9BUX1 264 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 SORL1Q92673 2214 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 K7EN84 100 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 NPYP01303 97 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 AMTNQ6UX39 209 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 ADAMTS20P59510 1910 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 ADCYAP1P18509 176 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 FAM222AQ5U5X8 452 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 RNF183Q96D59 192 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 POLQO75417 2590 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 P0C879 139 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 MDFICQ9P1T7 246 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 KLF12Q9Y4X4 402 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 FLNBO75369 2602 aaKnown RBP6.02□□□□□ -1.45
CTNND1-230ENST00000532245 A8MWP6 167 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 IGLC2P0DOY2 106 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 NKAPP1Q8N9T2 125 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 A0A087X0K7 114 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 MYMXA0A1B0GTQ4 84 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 SMIM27A0A1W2PRY6 76 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 K7EQG2 157 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 ZFAND6Q6FIF0 208 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 SH2D6Q7Z4S9 175 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 SMIM2Q9BVW6 85 aa6.02□□□□□ -1.45
CTNND1-230ENST00000532245 SUMO4Q6EEV6 95 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 HTTP42858 3142 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 DEFB131BA0A096LNP1 70 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 EIF4EBP1Q13541 118 aaPredicted RBP6.01□□□□□ -1.45
CTNND1-230ENST00000532245 LINC01559Q495D7 138 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 TRAV26-1A0A087WT03 109 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 GATA1P15976 413 aaPredicted RBP6.01□□□□□ -1.45
CTNND1-230ENST00000532245 CTAG1AP78358 180 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 COL5A1-AS1Q5SY13 56 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 TMEM141Q96I45 108 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 MSRB1Q9NZV6 116 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 PTPRBP23467 1997 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 GAGE10A6NGK3 116 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 TMEM238C9JI98 176 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 PMVKQ15126 192 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 RPL39LQ96EH5 51 aaKnown RBP6.01□□□□□ -1.45
CTNND1-230ENST00000532245 NDUFAF3Q9BU61 184 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 PGPEP1Q9NXJ5 209 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 COLCA2A8K830 154 aa6.01□□□□□ -1.45
CTNND1-230ENST00000532245 ZC2HC1BQ5TFG8 222 aa6□□□□□ -1.45
CTNND1-230ENST00000532245 GATD1Q8NB37 220 aa6□□□□□ -1.45
CTNND1-230ENST00000532245 ZNF503Q96F45 646 aa6□□□□□ -1.45
CTNND1-230ENST00000532245 IGLV1-40P01703 118 aa6□□□□□ -1.45
CTNND1-230ENST00000532245 PLXNB1O43157 2135 aa6□□□□□ -1.45
CTNND1-230ENST00000532245 Q6ZTI0 123 aa6□□□□□ -1.45
CTNND1-230ENST00000532245 RAI1Q7Z5J4 1906 aaPredicted RBP6□□□□□ -1.45
CTNND1-230ENST00000532245 SETD2Q9BYW2 2564 aaPredicted RBP6□□□□□ -1.45
CTNND1-230ENST00000532245 NHP2Q9NX24 153 aaKnown RBP6□□□□□ -1.45
CTNND1-230ENST00000532245 PRO0255Q9UI72 69 aa6□□□□□ -1.45
CTNND1-230ENST00000532245 TP53TG3Q9ULZ0 132 aa6□□□□□ -1.45
CTNND1-230ENST00000532245 C5orf38Q86SI9 138 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 C20orf173Q96LM9 149 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 C20orf144Q9BQM9 153 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 FN1P02751 2386 aaKnown RBP5.99□□□□□ -1.45
CTNND1-230ENST00000532245 MKI67P46013 3256 aaKnown RBP5.99□□□□□ -1.45
CTNND1-230ENST00000532245 UBE2BP63146 152 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 PAX2Q02962 417 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 C18orf32Q8TCD1 76 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 VSIG2Q96IQ7 327 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 ZFAND3Q9H8U3 227 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 CHD7Q9P2D1 2997 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 A0A1B0GV72 72 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 hDV102S1A0JD36 115 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 C20orf78Q9BR46 151 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 KLK12Q9UKR0 248 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 LEPROTO15243 131 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
CTNND1-230ENST00000532245 DAZ2Q13117 558 aaKnown RBP5.99□□□□□ -1.45
CTNND1-230ENST00000532245 GDF5OSQ5U4N7 250 aa5.99□□□□□ -1.45
CTNND1-230ENST00000532245 DAZ4Q86SG3 579 aaKnown RBP5.99□□□□□ -1.45
CTNND1-230ENST00000532245 DAZ3Q9NR90 486 aaKnown RBP5.99□□□□□ -1.45
CTNND1-230ENST00000532245 LAMA3Q16787 3333 aa5.98□□□□□ -1.45
CTNND1-230ENST00000532245 SPINK8P0C7L1 97 aa5.98□□□□□ -1.45
CTNND1-230ENST00000532245 TRBV7-3A0A075B6L6 115 aa5.98□□□□□ -1.45
CTNND1-230ENST00000532245 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.98□□□□□ -1.45
CTNND1-230ENST00000532245 SYS1-DBNDD2H3BUS1 97 aa5.98□□□□□ -1.45
CTNND1-230ENST00000532245 EDA2RQ9HAV5 297 aa5.98□□□□□ -1.45
CTNND1-230ENST00000532245 DOPEY1Q5JWR5 2465 aa5.98□□□□□ -1.45
CTNND1-230ENST00000532245 LBHQ53QV2 105 aaPredicted RBP5.98□□□□□ -1.45
CTNND1-230ENST00000532245 DNAJC30Q96LL9 226 aa5.98□□□□□ -1.45
CTNND1-230ENST00000532245 HIST1H2BLQ99880 126 aa5.98□□□□□ -1.45
CTNND1-230ENST00000532245 GHRHP01286 108 aa5.98□□□□□ -1.45
CTNND1-230ENST00000532245 DDTP30046 118 aa5.98□□□□□ -1.45
CTNND1-230ENST00000532245 MTORP42345 2549 aa5.97□□□□□ -1.45
CTNND1-230ENST00000532245 C3orf79P0CE67 100 aa5.97□□□□□ -1.45
CTNND1-230ENST00000532245 IGHV4-30-4P0DP06 118 aa5.97□□□□□ -1.45
CTNND1-230ENST00000532245 SMIM9A6NGZ8 99 aa5.97□□□□□ -1.45
CTNND1-230ENST00000532245 HERVK_113P63121 156 aa5.97□□□□□ -1.45
CTNND1-230ENST00000532245 C5orf42Q9H799 3197 aa5.97□□□□□ -1.45
CTNND1-230ENST00000532245 IGHV4-28A0A0C4DH34 117 aa5.97□□□□□ -1.45
CTNND1-230ENST00000532245 MIFP14174 115 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms