RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 RPH3ALQ9UNE2 315 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 NBDYA0A0U1RRE5 68 aa6.44□□□□□ -1.38
CHMP4A-205ENST00000531158 A0A1B0GW15 77 aa6.44□□□□□ -1.38
CHMP4A-205ENST00000531158 PLAC8L1A1L4L8 177 aa6.44□□□□□ -1.38
CHMP4A-205ENST00000531158 EPM2AB3EWF7 344 aa6.44□□□□□ -1.38
CHMP4A-205ENST00000531158 F2Z2F3 143 aa6.44□□□□□ -1.38
CHMP4A-205ENST00000531158 IGLV2-11P01706 119 aa6.44□□□□□ -1.38
CHMP4A-205ENST00000531158 AMTP48728 403 aa6.44□□□□□ -1.38
CHMP4A-205ENST00000531158 PSG9Q00887 426 aa6.44□□□□□ -1.38
CHMP4A-205ENST00000531158 DAZAP1Q96EP5 407 aaKnown RBP6.44□□□□□ -1.38
CHMP4A-205ENST00000531158 C20orf173Q96LM9 149 aa6.44□□□□□ -1.38
CHMP4A-205ENST00000531158 A0A0J9YX75 114 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 TEX48A0A1B0GUV7 120 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 A8MTW9 85 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 SPINK4O60575 86 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 RPL7P18124 248 aaKnown RBP6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 FOXA3P55318 350 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 KRTAP10-2P60368 255 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 PSG3Q16557 428 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 GOLT1AQ6ZVE7 132 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 COX8CQ7Z4L0 72 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 C6orf223Q8N319 242 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 C18orf15Q96N68 181 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 ALKBH7Q9BT30 221 aaPredicted RBP6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 VAMP8Q9BV40 100 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 AAMDCQ9H7C9 122 aa6.43□□□□□ -1.38
CHMP4A-205ENST00000531158 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-205ENST00000531158 CRXO43186 299 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-205ENST00000531158 PMCHP20382 165 aa6.42□□□□□ -1.38
CHMP4A-205ENST00000531158 DAD1P61803 113 aa6.42□□□□□ -1.38
CHMP4A-205ENST00000531158 LINC00469Q8N7U9 141 aa6.42□□□□□ -1.38
CHMP4A-205ENST00000531158 CHCHD1Q96BP2 118 aaKnown RBP6.42□□□□□ -1.38
CHMP4A-205ENST00000531158 LINC00588Q9Y4M8 146 aa6.42□□□□□ -1.38
CHMP4A-205ENST00000531158 DIRC3C9JPN6 131 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 HSBP1O75506 76 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 CT45A10P0DMU9 189 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 CSN1S1P47710 185 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 SSTP61278 116 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 PMCHL1Q16048 86 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 RRN3P1Q2M238 152 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 KIAA1644Q3SXP7 199 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 SPATA12Q7Z6I5 190 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 PRNTQ86SH4 94 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 NIT1Q86X76 327 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 EXOC3-AS1Q8N2X6 119 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 Q8N976 141 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 C15orf53Q8NAA6 179 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 GTSF1Q8WW33 167 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 BORCS7Q96B45 105 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 PSG8Q9UQ74 426 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 GOLT1BQ9Y3E0 138 aa6.41□□□□□ -1.38
CHMP4A-205ENST00000531158 A0A087X0K7 114 aa6.4□□□□□ -1.38
CHMP4A-205ENST00000531158 C20orf202A1L168 122 aa6.4□□□□□ -1.38
CHMP4A-205ENST00000531158 H3BTX0 84 aa6.4□□□□□ -1.38
CHMP4A-205ENST00000531158 AZU1P20160 251 aa6.4□□□□□ -1.38
CHMP4A-205ENST00000531158 KRTDAPP60985 99 aa6.4□□□□□ -1.38
CHMP4A-205ENST00000531158 RIGQ13278 110 aa6.4□□□□□ -1.38
CHMP4A-205ENST00000531158 OR2D3Q8NGH3 330 aa6.4□□□□□ -1.38
CHMP4A-205ENST00000531158 ZC2HC1AQ96GY0 325 aa6.4□□□□□ -1.38
CHMP4A-205ENST00000531158 MIEN1Q9BRT3 115 aa6.4□□□□□ -1.38
CHMP4A-205ENST00000531158 NDFIP1Q9BT67 221 aa6.4□□□□□ -1.38
CHMP4A-205ENST00000531158 TRAV8-1A0A0A6YYK1 113 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 TRAV8-2A0A0B4J237 113 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 A0A1B0GUT8 65 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 M0R143 59 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 M0R2Z0 102 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 SNRPCP09234 159 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 OR5AL1P0C617 328 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 C3orf79P0CE67 100 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 DEFB130BP0DP73 79 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 DEFB130AP0DP74 79 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 CTRLP40313 264 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 CAMPP49913 170 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 RPS20P60866 119 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 SPINK13Q1W4C9 94 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 SAPCD1Q5SSQ6 148 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 PGLYRP4Q96LB8 373 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 SGK494Q96LW2 274 aa6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 SSBP4Q9BWG4 385 aaPredicted RBP6.39□□□□□ -1.39
CHMP4A-205ENST00000531158 VPS13BQ7Z7G8 4022 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 RBAKDNA6NC62 111 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 LYRM9A8MSI8 78 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 J3QL48 77 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 EREGO14944 169 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 NUDT3O95989 172 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 PRB4P10163 310 aaPredicted RBP6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 ID1P41134 155 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 IGFL4Q6B9Z1 124 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 EBLN2Q6P2I7 272 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 RNASEKQ6P5S7 137 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 ZNF493Q6ZR52 646 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 RNF182Q8N6D2 247 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 MRPL53Q96EL3 112 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 SLC50A1Q9BRV3 221 aa6.38□□□□□ -1.39
CHMP4A-205ENST00000531158 TRAV12-2A0A075B6T6 113 aa6.37□□□□□ -1.39
CHMP4A-205ENST00000531158 F5H768 121 aa6.37□□□□□ -1.39
CHMP4A-205ENST00000531158 BTF3P20290 206 aaKnown RBP6.37□□□□□ -1.39
CHMP4A-205ENST00000531158 NTF3P20783 257 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms