RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.61
BRK1-201ENST00000530758 TRAV26-1A0A087WT03 109 aa11.2□□□□□ -0.62
BRK1-201ENST00000530758 TRGV4A0A0C4DH28 118 aa11.2□□□□□ -0.62
BRK1-201ENST00000530758 TRBV6-4A0A1B0GX49 114 aa11.2□□□□□ -0.62
BRK1-201ENST00000530758 SMIM27A0A1W2PRY6 76 aa11.2□□□□□ -0.62
BRK1-201ENST00000530758 RHODO00212 210 aa11.2□□□□□ -0.62
BRK1-201ENST00000530758 PPP1R2P9O14990 202 aa11.2□□□□□ -0.62
BRK1-201ENST00000530758 NTF3P20783 257 aa11.2□□□□□ -0.62
BRK1-201ENST00000530758 ANAPC16Q96DE5 110 aa11.2□□□□□ -0.62
BRK1-201ENST00000530758 SAMD10Q9BYL1 202 aa11.2□□□□□ -0.62
BRK1-201ENST00000530758 CARHSP1Q9Y2V2 147 aaKnown RBP11.2□□□□□ -0.62
BRK1-201ENST00000530758 KIF25-AS1Q9Y6Z4 181 aa11.2□□□□□ -0.62
BRK1-201ENST00000530758 MUC21A0A0G2JKD1 596 aa11.19□□□□□ -0.62
BRK1-201ENST00000530758 MUC21A0A140T8X8 626 aa11.19□□□□□ -0.62
BRK1-201ENST00000530758 TPPP3Q9BW30 176 aa11.19□□□□□ -0.62
BRK1-201ENST00000530758 MSRB1Q9NZV6 116 aa11.19□□□□□ -0.62
BRK1-201ENST00000530758 HIGD1CA8MV81 97 aa11.18□□□□□ -0.62
BRK1-201ENST00000530758 LINC00315P59091 139 aa11.18□□□□□ -0.62
BRK1-201ENST00000530758 PAX4O43316 350 aa11.17□□□□□ -0.62
BRK1-201ENST00000530758 MT-ND4LP03901 98 aa11.17□□□□□ -0.62
BRK1-201ENST00000530758 RNF212Q495C1 297 aa11.17□□□□□ -0.62
BRK1-201ENST00000530758 Q6ZSN1 163 aa11.17□□□□□ -0.62
BRK1-201ENST00000530758 SLC25A29Q8N8R3 303 aa11.17□□□□□ -0.62
BRK1-201ENST00000530758 NUP35Q8NFH5 326 aa11.17□□□□□ -0.62
BRK1-201ENST00000530758 PGLYRP4Q96LB8 373 aa11.17□□□□□ -0.62
BRK1-201ENST00000530758 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
BRK1-201ENST00000530758 A0A087WWL8 130 aa11.16□□□□□ -0.62
BRK1-201ENST00000530758 A0A0J9YY99 117 aa11.16□□□□□ -0.62
BRK1-201ENST00000530758 TRGC1P0CF51 173 aa11.16□□□□□ -0.62
BRK1-201ENST00000530758 AP1S3Q96PC3 154 aa11.16□□□□□ -0.62
BRK1-201ENST00000530758 EPPK1P58107 5090 aaKnown RBP11.16□□□□□ -0.62
BRK1-201ENST00000530758 A0A096LPF7 62 aa11.15□□□□□ -0.62
BRK1-201ENST00000530758 IGHV3-73A0A0B4J1V6 119 aa11.15□□□□□ -0.62
BRK1-201ENST00000530758 A0A1B0GUT8 65 aa11.15□□□□□ -0.62
BRK1-201ENST00000530758 RAB4BP61018 213 aa11.15□□□□□ -0.62
BRK1-201ENST00000530758 TWIST1Q15672 202 aa11.15□□□□□ -0.62
BRK1-201ENST00000530758 LGALS9CQ6DKI2 356 aa11.15□□□□□ -0.62
BRK1-201ENST00000530758 C14orf178Q8N769 122 aaPredicted RBP11.15□□□□□ -0.62
BRK1-201ENST00000530758 VPS13DQ5THJ4 4388 aa11.14□□□□□ -0.63
BRK1-201ENST00000530758 EVI2AP22794 236 aa11.14□□□□□ -0.63
BRK1-201ENST00000530758 SSTP61278 116 aa11.14□□□□□ -0.63
BRK1-201ENST00000530758 RHOHQ15669 191 aa11.14□□□□□ -0.63
BRK1-201ENST00000530758 NDUFA5Q16718 116 aa11.14□□□□□ -0.63
BRK1-201ENST00000530758 FAM74A4Q5TZK3 123 aa11.14□□□□□ -0.63
BRK1-201ENST00000530758 CTDSP1Q9GZU7 261 aa11.14□□□□□ -0.63
BRK1-201ENST00000530758 TMEM242Q9NWH2 141 aa11.14□□□□□ -0.63
BRK1-201ENST00000530758 K7EQD1 137 aa11.13□□□□□ -0.63
BRK1-201ENST00000530758 SMIM17P0DL12 118 aa11.13□□□□□ -0.63
BRK1-201ENST00000530758 MRPL23Q16540 153 aaKnown RBP11.13□□□□□ -0.63
BRK1-201ENST00000530758 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
BRK1-201ENST00000530758 IMMP2LQ96T52 175 aa11.13□□□□□ -0.63
BRK1-201ENST00000530758 PRADC1Q9BSG0 188 aa11.13□□□□□ -0.63
BRK1-201ENST00000530758 DPH3P1Q9H4G8 78 aa11.13□□□□□ -0.63
BRK1-201ENST00000530758 ICOSQ9Y6W8 199 aa11.13□□□□□ -0.63
BRK1-201ENST00000530758 TRBV10-1A0A0K0K1A3 114 aa11.12□□□□□ -0.63
BRK1-201ENST00000530758 NUDT3O95989 172 aa11.12□□□□□ -0.63
BRK1-201ENST00000530758 P0DMU3 169 aa11.12□□□□□ -0.63
BRK1-201ENST00000530758 FAM231AP0DMU4 169 aa11.12□□□□□ -0.63
BRK1-201ENST00000530758 FAM231CP0DMU5 169 aa11.12□□□□□ -0.63
BRK1-201ENST00000530758 GYPEP15421 78 aa11.12□□□□□ -0.63
BRK1-201ENST00000530758 RIGQ13278 110 aa11.12□□□□□ -0.63
BRK1-201ENST00000530758 A0A087WWC5 75 aa11.11□□□□□ -0.63
BRK1-201ENST00000530758 LINC00694P0DN24 101 aa11.11□□□□□ -0.63
BRK1-201ENST00000530758 SH2D6Q7Z4S9 175 aa11.11□□□□□ -0.63
BRK1-201ENST00000530758 SLC7A5P1Q8MH63 180 aa11.11□□□□□ -0.63
BRK1-201ENST00000530758 CLRN3Q8NCR9 226 aa11.11□□□□□ -0.63
BRK1-201ENST00000530758 LINC00476Q8WZB0 136 aa11.11□□□□□ -0.63
BRK1-201ENST00000530758 TMEM191AQ9H0A3 160 aa11.11□□□□□ -0.63
BRK1-201ENST00000530758 LOC100131303A0A0U1RQF7 123 aa11.1□□□□□ -0.63
BRK1-201ENST00000530758 A0A1B0GW15 77 aa11.1□□□□□ -0.63
BRK1-201ENST00000530758 C7orf77A4D0Y5 90 aa11.1□□□□□ -0.63
BRK1-201ENST00000530758 RHEBQ15382 184 aa11.1□□□□□ -0.63
BRK1-201ENST00000530758 SMIM15Q7Z3B0 74 aa11.1□□□□□ -0.63
BRK1-201ENST00000530758 FRZBQ92765 325 aa11.1□□□□□ -0.63
BRK1-201ENST00000530758 FAM3BP58499 235 aaPredicted RBP11.09□□□□□ -0.63
BRK1-201ENST00000530758 ESRGQ1W209 222 aa11.09□□□□□ -0.63
BRK1-201ENST00000530758 NEGR1Q7Z3B1 354 aa11.09□□□□□ -0.63
BRK1-201ENST00000530758 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
BRK1-201ENST00000530758 Q9UF83 564 aa11.09□□□□□ -0.63
BRK1-201ENST00000530758 A0A1B0GXF2 115 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 F5H697 171 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 M0QY20 66 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 APOC3P02656 99 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 SRIP30626 198 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 CCL18P55774 89 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 TIRAPP58753 221 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 ZNF56Q15929 161 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 LYPD5Q6UWN5 251 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 ATP5L2Q7Z4Y8 100 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 SVBPQ8N300 66 aa11.08□□□□□ -0.64
BRK1-201ENST00000530758 SNAPINO95295 136 aa11.07□□□□□ -0.64
BRK1-201ENST00000530758 SUMO4Q6EEV6 95 aa11.07□□□□□ -0.64
BRK1-201ENST00000530758 DNAH6Q9C0G6 4158 aa11.06□□□□□ -0.64
BRK1-201ENST00000530758 BIRC6Q9NR09 4857 aa11.06□□□□□ -0.64
BRK1-201ENST00000530758 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
BRK1-201ENST00000530758 TRAV9-1A0A075B6T8 112 aa11.06□□□□□ -0.64
BRK1-201ENST00000530758 H7C1H1 209 aa11.06□□□□□ -0.64
BRK1-201ENST00000530758 S100A8P05109 93 aa11.06□□□□□ -0.64
BRK1-201ENST00000530758 NEXN-AS1Q8NBZ9 246 aa11.06□□□□□ -0.64
BRK1-201ENST00000530758 DNAJC30Q96LL9 226 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms