RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 HSPG2P98160 4391 aa13.05□□□□□ -0.32
PTP4A2-212ENST00000529477 TRAV8-6A0A0B4J262 113 aa13.04□□□□□ -0.32
PTP4A2-212ENST00000529477 RAB19A4D1S5 217 aa13.04□□□□□ -0.32
PTP4A2-212ENST00000529477 ATP6V0E2Q8NHE4 81 aa13.04□□□□□ -0.32
PTP4A2-212ENST00000529477 SAMD10Q9BYL1 202 aa13.04□□□□□ -0.32
PTP4A2-212ENST00000529477 A0A087WWL8 130 aa13.03□□□□□ -0.32
PTP4A2-212ENST00000529477 XKRY2A2RUG3 117 aa13.03□□□□□ -0.32
PTP4A2-212ENST00000529477 RPS20P60866 119 aaKnown RBP13.03□□□□□ -0.32
PTP4A2-212ENST00000529477 SPANXN1Q5VSR9 72 aa13.03□□□□□ -0.32
PTP4A2-212ENST00000529477 ZNF575Q86XF7 245 aa13.03□□□□□ -0.32
PTP4A2-212ENST00000529477 WFDC10BQ8IUB3 73 aa13.03□□□□□ -0.32
PTP4A2-212ENST00000529477 OR5AL1P0C617 328 aa13.02□□□□□ -0.33
PTP4A2-212ENST00000529477 TNP2Q05952 138 aa13.02□□□□□ -0.33
PTP4A2-212ENST00000529477 OR10J3Q5JRS4 329 aa13.02□□□□□ -0.33
PTP4A2-212ENST00000529477 UFSP1Q6NVU6 142 aa13.02□□□□□ -0.33
PTP4A2-212ENST00000529477 Q6ZSN1 163 aa13.02□□□□□ -0.33
PTP4A2-212ENST00000529477 GTSF1LQ9H1H1 148 aa13.02□□□□□ -0.33
PTP4A2-212ENST00000529477 GAGE12JA6NER3 117 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 RBFOX3A6NFN3 312 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 SNAI2O43623 268 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 P01737 135 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 LINC00315P59091 139 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 GAGE1Q13065 139 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 GAGE4Q13068 117 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 GAGE5Q13069 117 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 GAGE13Q4V321 117 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 C10orf126Q8N4M7 172 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 OR2D3Q8NGH3 330 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 OR10AG1Q8NH19 301 aa13.01□□□□□ -0.33
PTP4A2-212ENST00000529477 IGHV3-38A0A0C4DH36 116 aa13□□□□□ -0.33
PTP4A2-212ENST00000529477 IGLV2-8P01709 118 aa13□□□□□ -0.33
PTP4A2-212ENST00000529477 DNAH10OSP0CZ25 163 aa13□□□□□ -0.33
PTP4A2-212ENST00000529477 NFE4Q86UQ8 179 aa13□□□□□ -0.33
PTP4A2-212ENST00000529477 SSBP4Q9BWG4 385 aaPredicted RBP13□□□□□ -0.33
PTP4A2-212ENST00000529477 TMEM250H0YL14 139 aa12.99□□□□□ -0.33
PTP4A2-212ENST00000529477 CRYGDP07320 174 aa12.99□□□□□ -0.33
PTP4A2-212ENST00000529477 SMIM17P0DL12 118 aa12.99□□□□□ -0.33
PTP4A2-212ENST00000529477 LELP1Q5T871 98 aa12.99□□□□□ -0.33
PTP4A2-212ENST00000529477 C14orf178Q8N769 122 aaPredicted RBP12.99□□□□□ -0.33
PTP4A2-212ENST00000529477 LYPD6BQ8NI32 183 aa12.99□□□□□ -0.33
PTP4A2-212ENST00000529477 TPPP3Q9BW30 176 aa12.99□□□□□ -0.33
PTP4A2-212ENST00000529477 TRBV20OR9-2A0A075B6H5 130 aa12.98□□□□□ -0.33
PTP4A2-212ENST00000529477 C19orf71A6NCJ1 209 aa12.98□□□□□ -0.33
PTP4A2-212ENST00000529477 SSTP61278 116 aa12.98□□□□□ -0.33
PTP4A2-212ENST00000529477 ZNF56Q15929 161 aa12.98□□□□□ -0.33
PTP4A2-212ENST00000529477 FER1L6-AS1Q8NA97 138 aa12.98□□□□□ -0.33
PTP4A2-212ENST00000529477 EIF5A2Q9GZV4 153 aaKnown RBP12.98□□□□□ -0.33
PTP4A2-212ENST00000529477 A0A087WWC5 75 aa12.97□□□□□ -0.33
PTP4A2-212ENST00000529477 MUC21A0A0G2JKD1 596 aa12.97□□□□□ -0.33
PTP4A2-212ENST00000529477 TRBV10-1A0A0K0K1A3 114 aa12.97□□□□□ -0.33
PTP4A2-212ENST00000529477 MUC21A0A140T8X8 626 aa12.97□□□□□ -0.33
PTP4A2-212ENST00000529477 RAB4BP61018 213 aa12.97□□□□□ -0.33
PTP4A2-212ENST00000529477 RPL36AP83881 106 aaKnown RBP12.97□□□□□ -0.33
PTP4A2-212ENST00000529477 RPL36ALQ969Q0 106 aaKnown RBP12.97□□□□□ -0.33
PTP4A2-212ENST00000529477 AP1S3Q96PC3 154 aa12.97□□□□□ -0.33
PTP4A2-212ENST00000529477 CEBPGP53567 150 aa12.96□□□□□ -0.33
PTP4A2-212ENST00000529477 TOR2AQ5JU69 321 aa12.96□□□□□ -0.33
PTP4A2-212ENST00000529477 MSRB1Q9NZV6 116 aa12.96□□□□□ -0.33
PTP4A2-212ENST00000529477 F2Z2F3 143 aa12.95□□□□□ -0.34
PTP4A2-212ENST00000529477 F5H697 171 aa12.95□□□□□ -0.34
PTP4A2-212ENST00000529477 LINC00694P0DN24 101 aa12.95□□□□□ -0.34
PTP4A2-212ENST00000529477 GZMBP10144 247 aa12.95□□□□□ -0.34
PTP4A2-212ENST00000529477 CACNG7P62955 275 aa12.95□□□□□ -0.34
PTP4A2-212ENST00000529477 LINC01556Q5JQF7 62 aa12.95□□□□□ -0.34
PTP4A2-212ENST00000529477 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.95□□□□□ -0.34
PTP4A2-212ENST00000529477 IGLC6P0CF74 106 aa12.94□□□□□ -0.34
PTP4A2-212ENST00000529477 TRBV7-3A0A075B6L6 115 aa12.93□□□□□ -0.34
PTP4A2-212ENST00000529477 EREGO14944 169 aa12.93□□□□□ -0.34
PTP4A2-212ENST00000529477 NUDT10Q8NFP7 164 aa12.93□□□□□ -0.34
PTP4A2-212ENST00000529477 OCC1Q8TAD7 63 aa12.93□□□□□ -0.34
PTP4A2-212ENST00000529477 NUDT11Q96G61 164 aa12.93□□□□□ -0.34
PTP4A2-212ENST00000529477 FAM210AQ96ND0 272 aa12.93□□□□□ -0.34
PTP4A2-212ENST00000529477 Q9UF83 564 aa12.93□□□□□ -0.34
PTP4A2-212ENST00000529477 HERC1Q15751 4861 aa12.93□□□□□ -0.34
PTP4A2-212ENST00000529477 RPP21Q9H633 154 aaKnown RBP12.92□□□□□ -0.34
PTP4A2-212ENST00000529477 NDUFS6O75380 124 aaKnown RBP12.91□□□□□ -0.34
PTP4A2-212ENST00000529477 IGHV3-30P01768 117 aa12.91□□□□□ -0.34
PTP4A2-212ENST00000529477 IGHV3-33P01772 117 aa12.91□□□□□ -0.34
PTP4A2-212ENST00000529477 TRGC1P0CF51 173 aa12.91□□□□□ -0.34
PTP4A2-212ENST00000529477 IGHV3-30-3P0DP02 117 aa12.91□□□□□ -0.34
PTP4A2-212ENST00000529477 IGHV3-30-5P0DP03 117 aa12.91□□□□□ -0.34
PTP4A2-212ENST00000529477 ERVFC1-1P60608 527 aa12.91□□□□□ -0.34
PTP4A2-212ENST00000529477 TNFRSF18Q9Y5U5 241 aa12.91□□□□□ -0.34
PTP4A2-212ENST00000529477 URGCP-MRPS24S4R325 110 aa12.91□□□□□ -0.34
PTP4A2-212ENST00000529477 C16orf90A8MZG2 172 aa12.9□□□□□ -0.34
PTP4A2-212ENST00000529477 K7EN84 100 aa12.9□□□□□ -0.34
PTP4A2-212ENST00000529477 LYZL1Q6UWQ5 148 aa12.9□□□□□ -0.34
PTP4A2-212ENST00000529477 Q6ZRN7 208 aaPredicted RBP12.9□□□□□ -0.34
PTP4A2-212ENST00000529477 SMIM7Q9BQ49 75 aa12.9□□□□□ -0.34
PTP4A2-212ENST00000529477 RNASE7Q9H1E1 156 aaKnown RBP12.9□□□□□ -0.34
PTP4A2-212ENST00000529477 LRP1BQ9NZR2 4599 aa12.89□□□□□ -0.35
PTP4A2-212ENST00000529477 H7C1H1 209 aa12.89□□□□□ -0.35
PTP4A2-212ENST00000529477 MGPP08493 103 aa12.89□□□□□ -0.35
PTP4A2-212ENST00000529477 OR10G8Q8NGN5 311 aa12.89□□□□□ -0.35
PTP4A2-212ENST00000529477 IBA57-AS1B1ANH7 110 aa12.88□□□□□ -0.35
PTP4A2-212ENST00000529477 PSCAO43653 123 aa12.88□□□□□ -0.35
PTP4A2-212ENST00000529477 UBE2D3P61077 147 aa12.88□□□□□ -0.35
PTP4A2-212ENST00000529477 UBE2D2P62837 147 aa12.88□□□□□ -0.35
PTP4A2-212ENST00000529477 KCNIP4Q6PIL6 250 aa12.88□□□□□ -0.35
PTP4A2-212ENST00000529477 TEX261Q6UWH6 196 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms