RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 SMIM9A6NGZ8 99 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST1H2BKO60814 126 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 SH2D1AO60880 128 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST1H2BJP06899 126 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 SNRPCP09234 159 aaKnown RBP4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 IGLC6P0CF74 106 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST1H2BOP23527 126 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST1H2BBP33778 126 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 CTRLP40313 264 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 CDKN1BP46527 198 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 CRIP1P50238 77 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST1H2BDP58876 126 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 NUTF2P61970 127 aaKnown RBP4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST1H2BCP62807 126 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 CACNG7P62955 275 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 Q0VG73 95 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST2H2BEQ16778 126 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 TDRG1Q3Y452 100 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 PIK3CD-AS1Q5SR53 167 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 C1orf134Q5TEV5 83 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 RNF182Q8N6D2 247 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 NHLRC2Q8NBF2 726 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST1H2BHQ93079 126 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST1H2BNQ99877 126 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 HIST1H2BMQ99879 126 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 DKK2Q9UBU2 259 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 TP53TG3Q9ULZ0 132 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 LAMTOR2Q9Y2Q5 125 aa4.39□□□□□ -1.71
CHRNA6-202ENST00000529467 SNURFLB1AK76 121 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 PRAC2D3DTV9 90 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 SNAI2O43623 268 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 CDK2AP2O75956 126 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 PPBPP02775 128 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 GPX1P07203 203 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 TRGC1P0CF51 173 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 ESDP10768 282 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 HLA-DRB4P13762 266 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 HOXA5P20719 270 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 EMP1P54849 157 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 GDF5OSQ5U4N7 250 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 TMEM136Q6ZRR5 245 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 UBE2DNLQ8IWF7 75 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 ZFAND2AQ8N6M9 145 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 GTSF1Q8WW33 167 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 C20orf173Q96LM9 149 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 SGK494Q96LW2 274 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 C8orf49Q96NF6 230 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 LINC00467Q9BRT7 94 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 HLA-DRB4X5D2U9 266 aa4.38□□□□□ -1.71
CHRNA6-202ENST00000529467 LRP1BQ9NZR2 4599 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 APCSP02743 223 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 ORM1P02763 201 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 RAB4AP20338 218 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 FXYD7P58549 80 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 DEFB1P60022 68 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 FABP9Q0Z7S8 132 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 ERCC8Q13216 396 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 COTL1Q14019 142 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 FAM222AQ5U5X8 452 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 CFAP161Q6P656 301 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 SMIM15Q7Z3B0 74 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 TMEM256Q8N2U0 113 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 FER1L6-AS1Q8NA97 138 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 PTH2Q96A98 100 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 TMEM191AQ9H0A3 160 aa4.37□□□□□ -1.71
CHRNA6-202ENST00000529467 IGHV3OR16-12A0A075B7B8 117 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 IGKV3D-20A0A0C4DH25 116 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 TEX48A0A1B0GUV7 120 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 C7orf71A4D174 169 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 C16orf90A8MZG2 172 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 ZNF324O75467 553 aaPredicted RBP4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 PPP1R17O96001 155 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 IGKV3-20P01619 116 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 ZNF80P51504 273 aaPredicted RBP4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 RAB4BP61018 213 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 IGFL4Q6B9Z1 124 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 MRPL54Q6P161 138 aaKnown RBP4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 FAM159AQ6UWV7 190 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 C1orf158Q8N1D5 194 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 MAPKAPK5-AS1Q8N8E1 139 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 Q8TAT8 98 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 PGLYRP4Q96LB8 373 aa4.36□□□□□ -1.71
CHRNA6-202ENST00000529467 TRGV11A0A075B6L2 103 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 K7EMI3 77 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 HTN3P15516 51 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 PMCHP20382 165 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 ASIPP42127 132 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 TCL1AP56279 114 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 SNRPEP62304 92 aaKnown RBP4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 ANXA2RQ3ZCQ2 193 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 FAM104BQ5XKR9 115 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 LYZL1Q6UWQ5 148 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 AMTNQ6UX39 209 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 Q8N1X5 172 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 C15orf53Q8NAA6 179 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 TMEM18Q96B42 140 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 SCRT2Q9NQ03 307 aa4.35□□□□□ -1.71
CHRNA6-202ENST00000529467 CHTOPQ9Y3Y2 248 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms