RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TRBV6-8A0A0A6YYG3 113 aa11.94□□□□□ -0.5
SSRP1-204ENST00000529002 SLPIP03973 132 aa11.94□□□□□ -0.5
SSRP1-204ENST00000529002 H2AFB2P0C5Z0 115 aa11.94□□□□□ -0.5
SSRP1-204ENST00000529002 KRTAP10-8P60410 259 aa11.94□□□□□ -0.5
SSRP1-204ENST00000529002 MIAQ16674 131 aa11.94□□□□□ -0.5
SSRP1-204ENST00000529002 C5orf17Q8NAS9 161 aa11.94□□□□□ -0.5
SSRP1-204ENST00000529002 IL36BQ9NZH7 164 aa11.94□□□□□ -0.5
SSRP1-204ENST00000529002 TRAV34A0A0B4J273 112 aa11.93□□□□□ -0.5
SSRP1-204ENST00000529002 A0A0J9YXV3 536 aa11.93□□□□□ -0.5
SSRP1-204ENST00000529002 A0A1W2PPV4 95 aa11.93□□□□□ -0.5
SSRP1-204ENST00000529002 GRIFINA4D1Z8 144 aa11.93□□□□□ -0.5
SSRP1-204ENST00000529002 ARMS2P0C7Q2 107 aa11.93□□□□□ -0.5
SSRP1-204ENST00000529002 ARL14EPLP0DKL9 152 aa11.93□□□□□ -0.5
SSRP1-204ENST00000529002 RPL36AP83881 106 aaKnown RBP11.93□□□□□ -0.5
SSRP1-204ENST00000529002 SPACA4Q8TDM5 124 aa11.93□□□□□ -0.5
SSRP1-204ENST00000529002 RPL36ALQ969Q0 106 aaKnown RBP11.93□□□□□ -0.5
SSRP1-204ENST00000529002 TRBV7-3A0A075B6L6 115 aa11.92□□□□□ -0.5
SSRP1-204ENST00000529002 SERTM2A0A1B0GWG4 89 aa11.92□□□□□ -0.5
SSRP1-204ENST00000529002 PTTG1O95997 202 aa11.92□□□□□ -0.5
SSRP1-204ENST00000529002 SCGB1C1Q8TD33 95 aa11.92□□□□□ -0.5
SSRP1-204ENST00000529002 SFRP2Q96HF1 295 aa11.92□□□□□ -0.5
SSRP1-204ENST00000529002 CHCHD5Q9BSY4 110 aa11.92□□□□□ -0.5
SSRP1-204ENST00000529002 WFDC1Q9HC57 220 aa11.92□□□□□ -0.5
SSRP1-204ENST00000529002 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
SSRP1-204ENST00000529002 hDV102S1A0JD36 115 aa11.91□□□□□ -0.5
SSRP1-204ENST00000529002 M0R036 132 aa11.91□□□□□ -0.5
SSRP1-204ENST00000529002 CNBPP62633 177 aaKnown RBP11.91□□□□□ -0.5
SSRP1-204ENST00000529002 SUMO1P63165 101 aaKnown RBP11.91□□□□□ -0.5
SSRP1-204ENST00000529002 WDR73Q6P4I2 378 aa11.91□□□□□ -0.5
SSRP1-204ENST00000529002 LINC00269Q8N2A0 174 aa11.91□□□□□ -0.5
SSRP1-204ENST00000529002 OR11H4Q8NGC9 324 aa11.91□□□□□ -0.5
SSRP1-204ENST00000529002 HSPB11Q9Y547 144 aa11.91□□□□□ -0.5
SSRP1-204ENST00000529002 IGHV3-64A0A075B6Q5 118 aa11.9□□□□□ -0.5
SSRP1-204ENST00000529002 B4DEV8 164 aa11.9□□□□□ -0.5
SSRP1-204ENST00000529002 K7EQM0 130 aa11.9□□□□□ -0.5
SSRP1-204ENST00000529002 M0R381 172 aa11.9□□□□□ -0.5
SSRP1-204ENST00000529002 PRR3P79522 188 aaKnown RBP11.9□□□□□ -0.5
SSRP1-204ENST00000529002 GTSF1Q8WW33 167 aa11.9□□□□□ -0.5
SSRP1-204ENST00000529002 PLAC8Q9NZF1 115 aa11.9□□□□□ -0.5
SSRP1-204ENST00000529002 EPDR1Q9UM22 224 aa11.9□□□□□ -0.5
SSRP1-204ENST00000529002 MUC21A0A0G2JKD1 596 aa11.89□□□□□ -0.51
SSRP1-204ENST00000529002 TRBV10-1A0A0K0K1A3 114 aa11.89□□□□□ -0.51
SSRP1-204ENST00000529002 NEXN-AS1Q8NBZ9 246 aa11.89□□□□□ -0.51
SSRP1-204ENST00000529002 C7orf33Q8WU49 177 aa11.89□□□□□ -0.51
SSRP1-204ENST00000529002 RNF185Q96GF1 192 aa11.89□□□□□ -0.51
SSRP1-204ENST00000529002 PRR34Q9NV39 138 aa11.89□□□□□ -0.51
SSRP1-204ENST00000529002 ARL2-SNX15V9GYD0 113 aa11.89□□□□□ -0.51
SSRP1-204ENST00000529002 FABP5P3A8MUU1 101 aa11.88□□□□□ -0.51
SSRP1-204ENST00000529002 CRIP1P50238 77 aa11.88□□□□□ -0.51
SSRP1-204ENST00000529002 RBX1P62877 108 aa11.88□□□□□ -0.51
SSRP1-204ENST00000529002 GAGE6Q13070 117 aa11.88□□□□□ -0.51
SSRP1-204ENST00000529002 SAPCD1Q5SSQ6 148 aa11.88□□□□□ -0.51
SSRP1-204ENST00000529002 NTM-AS1Q6ZSK4 140 aa11.88□□□□□ -0.51
SSRP1-204ENST00000529002 CLRN3Q8NCR9 226 aa11.88□□□□□ -0.51
SSRP1-204ENST00000529002 RBM38Q9H0Z9 239 aaKnown RBP11.88□□□□□ -0.51
SSRP1-204ENST00000529002 KRBOX1C9JBD0 128 aa11.87□□□□□ -0.51
SSRP1-204ENST00000529002 GCHFRP30047 84 aa11.87□□□□□ -0.51
SSRP1-204ENST00000529002 OR10G8Q8NGN5 311 aa11.87□□□□□ -0.51
SSRP1-204ENST00000529002 TMSB15BA0A087X1C1 80 aa11.86□□□□□ -0.51
SSRP1-204ENST00000529002 LYPD6BQ8NI32 183 aa11.86□□□□□ -0.51
SSRP1-204ENST00000529002 PHLDA3Q9Y5J5 127 aa11.86□□□□□ -0.51
SSRP1-204ENST00000529002 STAG3L2P0CL84 134 aa11.85□□□□□ -0.51
SSRP1-204ENST00000529002 STAG3L3P0CL85 134 aa11.85□□□□□ -0.51
SSRP1-204ENST00000529002 CDC34P49427 236 aaPredicted RBP11.85□□□□□ -0.51
SSRP1-204ENST00000529002 RAB5CP51148 216 aa11.85□□□□□ -0.51
SSRP1-204ENST00000529002 DNLZQ5SXM8 178 aa11.85□□□□□ -0.51
SSRP1-204ENST00000529002 COX6A2Q02221 97 aa11.84□□□□□ -0.51
SSRP1-204ENST00000529002 SUN5Q8TC36 379 aa11.84□□□□□ -0.51
SSRP1-204ENST00000529002 PPP1R1CQ8WVI7 109 aa11.84□□□□□ -0.51
SSRP1-204ENST00000529002 RAB24Q969Q5 203 aa11.84□□□□□ -0.51
SSRP1-204ENST00000529002 IGKV2-24A0A0C4DH68 120 aa11.83□□□□□ -0.52
SSRP1-204ENST00000529002 SH2D1AO60880 128 aa11.83□□□□□ -0.52
SSRP1-204ENST00000529002 TPT1P13693 172 aaKnown RBP11.83□□□□□ -0.52
SSRP1-204ENST00000529002 RPL12P30050 165 aaKnown RBP11.83□□□□□ -0.52
SSRP1-204ENST00000529002 MAJINQ3KP22 176 aa11.83□□□□□ -0.52
SSRP1-204ENST00000529002 AP5S1Q9NUS5 200 aa11.83□□□□□ -0.52
SSRP1-204ENST00000529002 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.82□□□□□ -0.52
SSRP1-204ENST00000529002 FAM240BA0A1B0GVZ2 78 aa11.82□□□□□ -0.52
SSRP1-204ENST00000529002 H2BFSP57053 126 aa11.82□□□□□ -0.52
SSRP1-204ENST00000529002 REG3AQ06141 175 aa11.82□□□□□ -0.52
SSRP1-204ENST00000529002 ZNF56Q15929 161 aa11.82□□□□□ -0.52
SSRP1-204ENST00000529002 PRSS3P2Q8NHM4 247 aa11.82□□□□□ -0.52
SSRP1-204ENST00000529002 PRR27Q6MZM9 219 aa11.81□□□□□ -0.52
SSRP1-204ENST00000529002 Q86TA4 180 aa11.81□□□□□ -0.52
SSRP1-204ENST00000529002 GFRA4Q9GZZ7 299 aa11.81□□□□□ -0.52
SSRP1-204ENST00000529002 MPC2O95563 127 aa11.8□□□□□ -0.52
SSRP1-204ENST00000529002 DEFA3P59666 94 aa11.8□□□□□ -0.52
SSRP1-204ENST00000529002 REG3GQ6UW15 175 aa11.8□□□□□ -0.52
SSRP1-204ENST00000529002 ZFP82Q8N141 532 aa11.8□□□□□ -0.52
SSRP1-204ENST00000529002 RAB4BP61018 213 aa11.79□□□□□ -0.52
SSRP1-204ENST00000529002 PKIAP61925 76 aa11.79□□□□□ -0.52
SSRP1-204ENST00000529002 SPINK6Q6UWN8 80 aa11.79□□□□□ -0.52
SSRP1-204ENST00000529002 STPG4Q8N801 248 aa11.79□□□□□ -0.52
SSRP1-204ENST00000529002 C20orf203Q8NBC4 194 aa11.79□□□□□ -0.52
SSRP1-204ENST00000529002 CYCSP99999 105 aaKnown RBP11.78□□□□□ -0.52
SSRP1-204ENST00000529002 DERL1Q9BUN8 251 aa11.78□□□□□ -0.52
SSRP1-204ENST00000529002 TRBV6-1A0A0K0K1D8 114 aa11.77□□□□□ -0.53
SSRP1-204ENST00000529002 MUC21A0A140T8X8 626 aa11.77□□□□□ -0.53
SSRP1-204ENST00000529002 SRSF9Q13242 221 aaKnown RBP eCLIP11.77□□□□□ -0.53
SSRP1-204ENST00000529002 IGLV4-60A0A075B6I1 120 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms