RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 OXLD1Q5BKU9 147 aa8.76□□□□□ -1.01
USF1-208ENST00000528768 KHDC1LQ5JSQ8 128 aa8.76□□□□□ -1.01
USF1-208ENST00000528768 DYNLRB2Q8TF09 96 aa8.76□□□□□ -1.01
USF1-208ENST00000528768 A0A1B0GV90 55 aa8.75□□□□□ -1.01
USF1-208ENST00000528768 CDKN1BP46527 198 aa8.75□□□□□ -1.01
USF1-208ENST00000528768 NUTF2P61970 127 aaKnown RBP8.75□□□□□ -1.01
USF1-208ENST00000528768 ORMDL2Q53FV1 153 aa8.75□□□□□ -1.01
USF1-208ENST00000528768 ZMAT5Q9UDW3 170 aaKnown RBP8.75□□□□□ -1.01
USF1-208ENST00000528768 TRGV11A0A075B6L2 103 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 A0A096LNJ9 63 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 GNRH2O43555 120 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 NXPH4O95158 308 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 PRSS1P07477 247 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 MGPP08493 103 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 CD7P09564 240 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 BATFQ16520 125 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 NRACQ8N912 160 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 OR11H1Q8NG94 326 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 OR9G4Q8NGQ1 327 aa8.74□□□□□ -1.01
USF1-208ENST00000528768 IGHV1OR15-1A0A075B7D0 117 aa8.73□□□□□ -1.01
USF1-208ENST00000528768 TRAV12-3A0A0B4J271 114 aa8.73□□□□□ -1.01
USF1-208ENST00000528768 hDV102S1A0JD36 115 aa8.73□□□□□ -1.01
USF1-208ENST00000528768 C3orf84H3BNL1 204 aa8.73□□□□□ -1.01
USF1-208ENST00000528768 DEFB1P60022 68 aa8.73□□□□□ -1.01
USF1-208ENST00000528768 MAJINQ3KP22 176 aa8.73□□□□□ -1.01
USF1-208ENST00000528768 C14orf178Q8N769 122 aaPredicted RBP8.73□□□□□ -1.01
USF1-208ENST00000528768 KLHL30-AS1Q8NEE0 82 aa8.73□□□□□ -1.01
USF1-208ENST00000528768 SMIM2Q9BVW6 85 aa8.73□□□□□ -1.01
USF1-208ENST00000528768 DNAH3Q8TD57 4116 aa8.73□□□□□ -1.01
USF1-208ENST00000528768 TRAV25A0A0B4J276 109 aa8.72□□□□□ -1.01
USF1-208ENST00000528768 NUDT3O95989 172 aa8.72□□□□□ -1.01
USF1-208ENST00000528768 RNASE3P12724 160 aaKnown RBP8.72□□□□□ -1.01
USF1-208ENST00000528768 EDN2P20800 178 aa8.72□□□□□ -1.01
USF1-208ENST00000528768 SLURP1P55000 103 aa8.72□□□□□ -1.01
USF1-208ENST00000528768 SUMO2P61956 95 aaKnown RBP8.72□□□□□ -1.01
USF1-208ENST00000528768 POM121L12Q8N7R1 296 aa8.72□□□□□ -1.01
USF1-208ENST00000528768 IGLV2-18A0A075B6J9 118 aa8.71□□□□□ -1.02
USF1-208ENST00000528768 COX8AP10176 69 aa8.71□□□□□ -1.02
USF1-208ENST00000528768 GATA1P15976 413 aaPredicted RBP8.71□□□□□ -1.02
USF1-208ENST00000528768 CMC4P56277 68 aaPredicted RBP8.71□□□□□ -1.02
USF1-208ENST00000528768 RPL32P62910 135 aaKnown RBP8.71□□□□□ -1.02
USF1-208ENST00000528768 DEFB121Q5J5C9 76 aa8.71□□□□□ -1.02
USF1-208ENST00000528768 Q6ZQT7 251 aa8.71□□□□□ -1.02
USF1-208ENST00000528768 B9D2Q9BPU9 175 aa8.71□□□□□ -1.02
USF1-208ENST00000528768 BIRC6Q9NR09 4857 aa8.7□□□□□ -1.02
USF1-208ENST00000528768 TRAV26-2A0A0B4J265 109 aa8.7□□□□□ -1.02
USF1-208ENST00000528768 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.7□□□□□ -1.02
USF1-208ENST00000528768 K7EIL1 84 aa8.7□□□□□ -1.02
USF1-208ENST00000528768 TCAPO15273 167 aa8.7□□□□□ -1.02
USF1-208ENST00000528768 IGKV3-20P01619 116 aa8.7□□□□□ -1.02
USF1-208ENST00000528768 NHLRC4P0CG21 123 aaPredicted RBP8.7□□□□□ -1.02
USF1-208ENST00000528768 RAX2Q96IS3 184 aa8.7□□□□□ -1.02
USF1-208ENST00000528768 C18orf15Q96N68 181 aa8.7□□□□□ -1.02
USF1-208ENST00000528768 SELENOKQ9Y6D0 94 aa8.7□□□□□ -1.02
USF1-208ENST00000528768 IGHV3-16A0A0C4DH30 117 aa8.69□□□□□ -1.02
USF1-208ENST00000528768 F5H697 171 aa8.69□□□□□ -1.02
USF1-208ENST00000528768 DPM2O94777 84 aa8.69□□□□□ -1.02
USF1-208ENST00000528768 HLA-DRB4P13762 266 aa8.69□□□□□ -1.02
USF1-208ENST00000528768 DEFB131AP59861 70 aa8.69□□□□□ -1.02
USF1-208ENST00000528768 SPINK13Q1W4C9 94 aa8.69□□□□□ -1.02
USF1-208ENST00000528768 NDUFA11Q86Y39 141 aa8.69□□□□□ -1.02
USF1-208ENST00000528768 WFDC9Q8NEX5 89 aa8.69□□□□□ -1.02
USF1-208ENST00000528768 C9orf85Q96MD7 179 aa8.69□□□□□ -1.02
USF1-208ENST00000528768 SPAG8Q99932 426 aaPredicted RBP8.69□□□□□ -1.02
USF1-208ENST00000528768 HLA-DRB4X5D2U9 266 aa8.69□□□□□ -1.02
USF1-208ENST00000528768 VCYO14598 125 aa8.68□□□□□ -1.02
USF1-208ENST00000528768 SIVA1O15304 175 aa8.68□□□□□ -1.02
USF1-208ENST00000528768 DLEU1O43261 78 aa8.68□□□□□ -1.02
USF1-208ENST00000528768 GAS8-AS1O95177 125 aa8.68□□□□□ -1.02
USF1-208ENST00000528768 IGKCP01834 107 aa8.68□□□□□ -1.02
USF1-208ENST00000528768 FXYD7P58549 80 aa8.68□□□□□ -1.02
USF1-208ENST00000528768 KIR3DS1Q14943 382 aa8.68□□□□□ -1.02
USF1-208ENST00000528768 DEFB136Q30KP8 78 aa8.68□□□□□ -1.02
USF1-208ENST00000528768 RASL10AQ92737 203 aa8.68□□□□□ -1.02
USF1-208ENST00000528768 KIR2DL4Q99706 377 aa8.68□□□□□ -1.02
USF1-208ENST00000528768 MCRIP2Q9BUT9 160 aaKnown RBP8.68□□□□□ -1.02
USF1-208ENST00000528768 TSSC4Q9Y5U2 329 aaPredicted RBP8.68□□□□□ -1.02
USF1-208ENST00000528768 TRAV12-1A0A0B4J245 112 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 CBY3A6NI87 242 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 A8MTW9 85 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 H7C1H1 209 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 PLNP26678 52 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 HINT1P49773 126 aaPredicted RBP8.67□□□□□ -1.02
USF1-208ENST00000528768 DEFB114Q30KQ6 69 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 NSUN5P1Q3KNT7 163 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 LINC00469Q8N7U9 141 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 C11orf44Q8N8P7 122 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 DLX4Q92988 240 aaPredicted RBP8.67□□□□□ -1.02
USF1-208ENST00000528768 CLUHP3Q96NS8 147 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 SCGB3A1Q96QR1 104 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 CSTL1Q9H114 145 aa8.67□□□□□ -1.02
USF1-208ENST00000528768 TRAV12-2A0A075B6T6 113 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 H3BMM0 161 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 ODF1Q14990 250 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 TMEM97Q5BJF2 176 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 PIK3CD-AS1Q5SR53 167 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 AMTNQ6UX39 209 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 ADAMTSL5Q6ZMM2 481 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 C18orf65Q6ZTR6 163 aa8.66□□□□□ -1.02
USF1-208ENST00000528768 TRPT1Q86TN4 253 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms