RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 M0R381 172 aa13.06□□□□□ -0.32
PKP3-204ENST00000526971 NXPH4O95158 308 aa13.06□□□□□ -0.32
PKP3-204ENST00000526971 DAZAP1Q96EP5 407 aaKnown RBP13.06□□□□□ -0.32
PKP3-204ENST00000526971 SFRP2Q96HF1 295 aa13.06□□□□□ -0.32
PKP3-204ENST00000526971 HERC1Q15751 4861 aa13.06□□□□□ -0.32
PKP3-204ENST00000526971 TTC32Q5I0X7 151 aa13.05□□□□□ -0.32
PKP3-204ENST00000526971 SSBP4Q9BWG4 385 aaPredicted RBP13.05□□□□□ -0.32
PKP3-204ENST00000526971 KRTAP1-5Q9BYS1 174 aa13.05□□□□□ -0.32
PKP3-204ENST00000526971 C19orf71A6NCJ1 209 aa13.04□□□□□ -0.32
PKP3-204ENST00000526971 TMEM250H0YL14 139 aa13.04□□□□□ -0.32
PKP3-204ENST00000526971 RHODO00212 210 aa13.04□□□□□ -0.32
PKP3-204ENST00000526971 SNAI2O43623 268 aa13.04□□□□□ -0.32
PKP3-204ENST00000526971 BIN3Q9NQY0 253 aa13.04□□□□□ -0.32
PKP3-204ENST00000526971 A0A1W2PPQ1 181 aa13.03□□□□□ -0.32
PKP3-204ENST00000526971 SIVA1O15304 175 aa13.03□□□□□ -0.32
PKP3-204ENST00000526971 OR5AL1P0C617 328 aa13.03□□□□□ -0.32
PKP3-204ENST00000526971 Q8N1X5 172 aa13.03□□□□□ -0.32
PKP3-204ENST00000526971 OR2D3Q8NGH3 330 aa13.03□□□□□ -0.32
PKP3-204ENST00000526971 OR10AG1Q8NH19 301 aa13.03□□□□□ -0.32
PKP3-204ENST00000526971 A0A087WWL8 130 aa13.02□□□□□ -0.33
PKP3-204ENST00000526971 CRYGDP07320 174 aa13.02□□□□□ -0.33
PKP3-204ENST00000526971 TIRAPP58753 221 aa13.02□□□□□ -0.33
PKP3-204ENST00000526971 RPS20P60866 119 aaKnown RBP13.02□□□□□ -0.33
PKP3-204ENST00000526971 TOR2AQ5JU69 321 aa13.02□□□□□ -0.33
PKP3-204ENST00000526971 FAM74A4Q5TZK3 123 aa13.02□□□□□ -0.33
PKP3-204ENST00000526971 SPATA12Q7Z6I5 190 aa13.02□□□□□ -0.33
PKP3-204ENST00000526971 P01737 135 aa13.01□□□□□ -0.33
PKP3-204ENST00000526971 OCC1Q8TAD7 63 aa13.01□□□□□ -0.33
PKP3-204ENST00000526971 FAM210AQ96ND0 272 aa13.01□□□□□ -0.33
PKP3-204ENST00000526971 EIF5A2Q9GZV4 153 aaKnown RBP13.01□□□□□ -0.33
PKP3-204ENST00000526971 MUC21A0A0G2JKD1 596 aa13□□□□□ -0.33
PKP3-204ENST00000526971 MUC21A0A140T8X8 626 aa13□□□□□ -0.33
PKP3-204ENST00000526971 GZMBP10144 247 aa13□□□□□ -0.33
PKP3-204ENST00000526971 KRTAP10-2P60368 255 aa13□□□□□ -0.33
PKP3-204ENST00000526971 SPANXN1Q5VSR9 72 aa13□□□□□ -0.33
PKP3-204ENST00000526971 TEX261Q6UWH6 196 aa13□□□□□ -0.33
PKP3-204ENST00000526971 C14orf178Q8N769 122 aaPredicted RBP13□□□□□ -0.33
PKP3-204ENST00000526971 NDUFS6O75380 124 aaKnown RBP12.99□□□□□ -0.33
PKP3-204ENST00000526971 IGLC6P0CF74 106 aa12.99□□□□□ -0.33
PKP3-204ENST00000526971 NUDT10Q8NFP7 164 aa12.99□□□□□ -0.33
PKP3-204ENST00000526971 NUDT11Q96G61 164 aa12.99□□□□□ -0.33
PKP3-204ENST00000526971 XKRY2A2RUG3 117 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 GAGE12JA6NER3 117 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 K7EN84 100 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 LINC00694P0DN24 101 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 GAGE1Q13065 139 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 GAGE4Q13068 117 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 GAGE5Q13069 117 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 GAGE13Q4V321 117 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 WFDC10BQ8IUB3 73 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 FER1L6-AS1Q8NA97 138 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 ATP6V0E2Q8NHE4 81 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 Q9UF83 564 aa12.98□□□□□ -0.33
PKP3-204ENST00000526971 BTF3P20290 206 aaKnown RBP12.97□□□□□ -0.33
PKP3-204ENST00000526971 CEBPGP53567 150 aa12.97□□□□□ -0.33
PKP3-204ENST00000526971 GTSF1LQ9H1H1 148 aa12.97□□□□□ -0.33
PKP3-204ENST00000526971 SSTP61278 116 aa12.96□□□□□ -0.33
PKP3-204ENST00000526971 TPPP3Q9BW30 176 aa12.96□□□□□ -0.33
PKP3-204ENST00000526971 LY96Q9Y6Y9 160 aa12.96□□□□□ -0.33
PKP3-204ENST00000526971 TRAV9-2A0A087WT02 112 aa12.95□□□□□ -0.34
PKP3-204ENST00000526971 SRP19P09132 144 aaKnown RBP12.95□□□□□ -0.34
PKP3-204ENST00000526971 DNAH10OSP0CZ25 163 aa12.95□□□□□ -0.34
PKP3-204ENST00000526971 RAB4BP61018 213 aa12.95□□□□□ -0.34
PKP3-204ENST00000526971 RNASE7Q9H1E1 156 aaKnown RBP12.95□□□□□ -0.34
PKP3-204ENST00000526971 RPP21Q9H633 154 aaKnown RBP12.95□□□□□ -0.34
PKP3-204ENST00000526971 TRAV8-6A0A0B4J262 113 aa12.94□□□□□ -0.34
PKP3-204ENST00000526971 TRBV10-1A0A0K0K1A3 114 aa12.94□□□□□ -0.34
PKP3-204ENST00000526971 F2Z2F3 143 aa12.94□□□□□ -0.34
PKP3-204ENST00000526971 CACNG7P62955 275 aa12.94□□□□□ -0.34
PKP3-204ENST00000526971 LELP1Q5T871 98 aa12.94□□□□□ -0.34
PKP3-204ENST00000526971 FAT1Q14517 4588 aa12.93□□□□□ -0.34
PKP3-204ENST00000526971 K7EP13 123 aa12.93□□□□□ -0.34
PKP3-204ENST00000526971 EVI2AP22794 236 aa12.93□□□□□ -0.34
PKP3-204ENST00000526971 AP1S3Q96PC3 154 aa12.93□□□□□ -0.34
PKP3-204ENST00000526971 SMIM7Q9BQ49 75 aa12.93□□□□□ -0.34
PKP3-204ENST00000526971 KIF25-AS1Q9Y6Z4 181 aa12.93□□□□□ -0.34
PKP3-204ENST00000526971 SMIM17P0DL12 118 aa12.92□□□□□ -0.34
PKP3-204ENST00000526971 LINC00315P59091 139 aa12.92□□□□□ -0.34
PKP3-204ENST00000526971 ZNF56Q15929 161 aa12.92□□□□□ -0.34
PKP3-204ENST00000526971 OR10J3Q5JRS4 329 aa12.92□□□□□ -0.34
PKP3-204ENST00000526971 LYZL1Q6UWQ5 148 aa12.92□□□□□ -0.34
PKP3-204ENST00000526971 MSRB1Q9NZV6 116 aa12.92□□□□□ -0.34
PKP3-204ENST00000526971 IGHV3-38A0A0C4DH36 116 aa12.91□□□□□ -0.34
PKP3-204ENST00000526971 ZNF727A8MUV8 499 aa12.91□□□□□ -0.34
PKP3-204ENST00000526971 FAM231DQ6ZW35 169 aa12.91□□□□□ -0.34
PKP3-204ENST00000526971 F5H697 171 aa12.9□□□□□ -0.34
PKP3-204ENST00000526971 CTRLP40313 264 aa12.9□□□□□ -0.34
PKP3-204ENST00000526971 RPL36AP83881 106 aaKnown RBP12.9□□□□□ -0.34
PKP3-204ENST00000526971 LINC01556Q5JQF7 62 aa12.9□□□□□ -0.34
PKP3-204ENST00000526971 WDR73Q6P4I2 378 aa12.9□□□□□ -0.34
PKP3-204ENST00000526971 OR10G8Q8NGN5 311 aa12.9□□□□□ -0.34
PKP3-204ENST00000526971 RPL36ALQ969Q0 106 aaKnown RBP12.9□□□□□ -0.34
PKP3-204ENST00000526971 DMBT1Q9UGM3 2413 aaPredicted RBP12.9□□□□□ -0.34
PKP3-204ENST00000526971 A0A087WWC5 75 aa12.89□□□□□ -0.35
PKP3-204ENST00000526971 GATCO43716 136 aaKnown RBP12.89□□□□□ -0.35
PKP3-204ENST00000526971 LINC01551Q86U37 167 aa12.89□□□□□ -0.35
PKP3-204ENST00000526971 TRBV7-3A0A075B6L6 115 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 C9JQL5 133 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 NTF3P20783 257 aa12.88□□□□□ -0.35
PKP3-204ENST00000526971 ERVFC1-1P60608 527 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms