RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PYY3Q5JQD4 70 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 C10orf55Q5SWW7 151 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 LINC00322Q6ZN03 302 aaPredicted RBP0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 Q6ZQY7 126 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 LINC00299Q6ZSB3 139 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 ZNF833PQ6ZTB9 187 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 SMIM5Q71RC9 77 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 DEFB107AQ8IZN7 70 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 Q8N6K4 173 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 SERP2Q8N6R1 65 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 WFDC9Q8NEX5 89 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 CCL4L1Q8NHW4 92 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 COX7B2Q8TF08 81 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 TRGV9Q99603 122 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 CYP4F30PQ9H0H9 118 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 PRO2289Q9P1D8 64 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 LINC00474Q9P2X8 69 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 CACFD1Q9UGQ2 172 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 LHFPL6Q9Y693 200 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 RALGAPA2Q2PPJ7 1873 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 CCDC88AQ3V6T2 1871 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 KMT2EQ8IZD2 1858 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 MYO5AQ9Y4I1 1855 aaKnown RBP0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 WDR97A6NE52 1622 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 CACNA1DQ01668 2161 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 LOXHD1Q8IVV2 1947 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 ANKRD36BQ8N2N9 1353 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 DAPK1P53355 1430 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 PPIP5K1Q6PFW1 1433 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 TEX14Q8IWB6 1497 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 FYCO1Q9BQS8 1478 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 N4BP2Q86UW6 1770 aaPredicted RBP0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 TAF1LQ8IZX4 1826 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 KIAA1671Q9BY89 1806 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 SPEF2Q9C093 1822 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 KDM5BQ9UGL1 1544 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 NAV1Q8NEY1 1877 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 NRKQ7Z2Y5 1582 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 REREQ9P2R6 1566 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 IGKV3-7A0A075B6H7 116 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 A0A087WVE0 104 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 TRAV21A0A0B4J279 112 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 IGKV3D-7A0A0C4DH55 119 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 IGKV3OR2-268A0A0C4DH90 116 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 CLPSL1A2RUU4 121 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 FAM223BA6NKX1 122 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 CEBPZOSA8MTT3 80 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 F8VRH5 84 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 F8WEM9 126 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 SYS1-DBNDD2H3BUS1 97 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 M0R135 149 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 HMGN4O00479 90 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 MRPS14O60783 128 aaKnown RBP0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 SIX6O95475 246 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 IGHV3-33P01772 117 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 CLPSP04118 112 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 CCL4P13236 92 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 FCER1GP30273 86 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 ELOF1P60002 83 aaKnown RBP0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 SNRPFP62306 86 aaKnown RBP0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 DEFB103AP81534 67 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 PLGLAQ15195 96 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 HMGN3Q15651 99 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 ASB16-AS1Q495Z4 193 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 GDF5OSQ5U4N7 250 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 CFAP126Q5VTH2 177 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 SBSPONQ8IVN8 264 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 FAM223AQ8IWN6 122 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 SMIM4Q8WVI0 70 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 C20orf78Q9BR46 151 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 FAM103A1Q9BTL3 118 aaKnown RBP0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 FXYD6Q9H0Q3 95 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 CYSTM1Q9H1C7 97 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 MED9Q9NWA0 146 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 RABAC1Q9UI14 185 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 COL18A1P39060 1754 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 C10orf71Q711Q0 1435 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 CASKIN1Q8WXD9 1431 aa0.55□□□□□ -2.32
ECHDC1-219ENST00000526299 A2ML1A8K2U0 1454 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 ARAP1Q96P48 1450 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 ARHGAP5Q13017 1502 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 PIK3C2AO00443 1686 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 TRGV1A0A0A0MS02 117 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 A0A0D9SFI3 127 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 IGLC7A0M8Q6 106 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 A6NN06 94 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 IQCF6A8MYZ5 107 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 NUPR1O60356 82 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 ACYP1P07311 99 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 MGPP08493 103 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 ARMS2P0C7Q2 107 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 CAV3P56539 151 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 CNBPP62633 177 aaKnown RBP0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 RPL38P63173 70 aaKnown RBP0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 PDE6HQ13956 83 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 COX17Q14061 63 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 WFDC2Q14508 124 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 FXYD3Q14802 87 aa0.54□□□□□ -2.32
ECHDC1-219ENST00000526299 DEFB112Q30KQ8 113 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms