RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TPPP3Q9BW30 176 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 SEC11CQ9BY50 192 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 CARHSP1Q9Y2V2 147 aaKnown RBP4.54□□□□□ -1.68
CD44-214ENST00000525211 BIRC6Q9NR09 4857 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 DEFB131BA0A096LNP1 70 aa4.53□□□□□ -1.68
CD44-214ENST00000525211 A0A0J9YY99 117 aa4.53□□□□□ -1.68
CD44-214ENST00000525211 GAS8-AS1O95177 125 aa4.53□□□□□ -1.68
CD44-214ENST00000525211 CTRLP40313 264 aa4.53□□□□□ -1.68
CD44-214ENST00000525211 RNF151Q2KHN1 245 aa4.53□□□□□ -1.68
CD44-214ENST00000525211 C14orf178Q8N769 122 aaPredicted RBP4.53□□□□□ -1.68
CD44-214ENST00000525211 NUP35Q8NFH5 326 aa4.53□□□□□ -1.68
CD44-214ENST00000525211 SPXQ9BT56 116 aa4.53□□□□□ -1.68
CD44-214ENST00000525211 KIF25-AS1Q9Y6Z4 181 aa4.53□□□□□ -1.68
CD44-214ENST00000525211 HYDINQ4G0P3 5121 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 TRGV2A0A075B6R0 118 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 SMIM27A0A1W2PRY6 76 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 C7orf77A4D0Y5 90 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 HIGD1CA8MV81 97 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 F5H768 121 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 OR5AL1P0C617 328 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 NTF3P20783 257 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 EVI2AP22794 236 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 FAM3BP58499 235 aaPredicted RBP4.52□□□□□ -1.69
CD44-214ENST00000525211 LGALS9BQ3B8N2 356 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 TMEM88Q6PEY1 159 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 CEMP1Q6PRD7 247 aaPredicted RBP4.52□□□□□ -1.69
CD44-214ENST00000525211 TSKUQ8WUA8 353 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 PTH2Q96A98 100 aa4.52□□□□□ -1.69
CD44-214ENST00000525211 IGHV4-4A0A075B6R2 117 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 TRAV10A0A0B4J240 114 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 TRAV4A0A0B4J268 109 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 A8MWL6 223 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 IGLL5B9A064 214 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 PAX4O43316 350 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 GYPEP15421 78 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 GATA1P15976 413 aaPredicted RBP4.51□□□□□ -1.69
CD44-214ENST00000525211 RPS20P60866 119 aaKnown RBP4.51□□□□□ -1.69
CD44-214ENST00000525211 CASC10Q5T4H9 136 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 OR4C5Q8NGB2 326 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 C18orf15Q96N68 181 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 CNFNQ9BYD5 112 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 BIN3Q9NQY0 253 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 PHLDA3Q9Y5J5 127 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 TENM2Q9NT68 2774 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 LYSTQ99698 3801 aa4.51□□□□□ -1.69
CD44-214ENST00000525211 RYR2Q92736 4967 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 TRAV26-1A0A087WT03 109 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 A0A096LPF7 62 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 TRAV26-2A0A0B4J265 109 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 A0A1B0GXF2 115 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 SCO1O75880 301 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 APOC3P02656 99 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 ATP5G1P05496 136 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 CRYBA4P53673 196 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 GAGE13Q4V321 117 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 FAM74A4Q5TZK3 123 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 SPANXN1Q5VSR9 72 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 MRPL54Q6P161 138 aaKnown RBP4.5□□□□□ -1.69
CD44-214ENST00000525211 C15orf54Q8N8G6 183 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 DEFB104AQ8WTQ1 72 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 RNF185Q96GF1 192 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 YPEL4Q96NS1 127 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 DNAH6Q9C0G6 4158 aa4.5□□□□□ -1.69
CD44-214ENST00000525211 SMKR1H3BMG3 65 aa4.49□□□□□ -1.69
CD44-214ENST00000525211 PNRC1Q12796 327 aaPredicted RBP4.49□□□□□ -1.69
CD44-214ENST00000525211 TWIST1Q15672 202 aa4.49□□□□□ -1.69
CD44-214ENST00000525211 SUMO4Q6EEV6 95 aa4.49□□□□□ -1.69
CD44-214ENST00000525211 ZFP82Q8N141 532 aa4.49□□□□□ -1.69
CD44-214ENST00000525211 SLC25A29Q8N8R3 303 aa4.49□□□□□ -1.69
CD44-214ENST00000525211 URGCP-MRPS24S4R325 110 aa4.49□□□□□ -1.69
CD44-214ENST00000525211 KMT2AQ03164 3969 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 TGIF2-C20orf24A0A0A6YYL0 155 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 TRGV4A0A0C4DH28 118 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 TEX48A0A1B0GUV7 120 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 A0A1W2PPQ1 181 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 XKRY2A2RUG3 117 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 F2Z2F3 143 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 MT-ND4LP03901 98 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 MGPP08493 103 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 LINC00694P0DN24 101 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 MALP21145 153 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 CACNG7P62955 275 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 PIK3CD-AS1Q5SR53 167 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 WDR73Q6P4I2 378 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 CBLN2Q8IUK8 224 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 AMN1Q8IY45 258 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 GATD1Q8NB37 220 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 SYT8Q8NBV8 401 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 RPL39LQ96EH5 51 aaKnown RBP4.48□□□□□ -1.69
CD44-214ENST00000525211 GFRA4Q9GZZ7 299 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 RPS10P5Q9NQ39 176 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 NAT8BQ9UHF3 227 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 HHLA3Q9XRX5 114 aa4.48□□□□□ -1.69
CD44-214ENST00000525211 A0A087WWC5 75 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 A0A1B0GUT8 65 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 FAM231BA6NCW3 169 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 GAGE12JA6NER3 117 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 A8MWV9 139 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms