RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 PAGE4O60829 102 aa6.32□□□□□ -1.4
SF3B2-204ENST00000525207 ARMS2P0C7Q2 107 aa6.32□□□□□ -1.4
SF3B2-204ENST00000525207 KRTAP10-1P60331 282 aa6.32□□□□□ -1.4
SF3B2-204ENST00000525207 GAGE1Q13065 139 aa6.32□□□□□ -1.4
SF3B2-204ENST00000525207 GAGE4Q13068 117 aa6.32□□□□□ -1.4
SF3B2-204ENST00000525207 GAGE5Q13069 117 aa6.32□□□□□ -1.4
SF3B2-204ENST00000525207 GAGE13Q4V321 117 aa6.32□□□□□ -1.4
SF3B2-204ENST00000525207 Q8N3U1 123 aa6.32□□□□□ -1.4
SF3B2-204ENST00000525207 C14orf178Q8N769 122 aaPredicted RBP6.32□□□□□ -1.4
SF3B2-204ENST00000525207 FAM213BQ8TBF2 198 aa6.32□□□□□ -1.4
SF3B2-204ENST00000525207 ZNF471Q9BX82 626 aaPredicted RBP6.32□□□□□ -1.4
SF3B2-204ENST00000525207 Q9UF83 564 aa6.32□□□□□ -1.4
SF3B2-204ENST00000525207 SCO2A0A1W2PP80 73 aa6.31□□□□□ -1.4
SF3B2-204ENST00000525207 GRIFINA4D1Z8 144 aa6.31□□□□□ -1.4
SF3B2-204ENST00000525207 M0R381 172 aa6.31□□□□□ -1.4
SF3B2-204ENST00000525207 TPT1P13693 172 aaKnown RBP6.31□□□□□ -1.4
SF3B2-204ENST00000525207 XGP55808 180 aa6.31□□□□□ -1.4
SF3B2-204ENST00000525207 FAM74A4Q5TZK3 123 aa6.31□□□□□ -1.4
SF3B2-204ENST00000525207 ZFP82Q8N141 532 aa6.31□□□□□ -1.4
SF3B2-204ENST00000525207 NTN5Q8WTR8 489 aaPredicted RBP6.31□□□□□ -1.4
SF3B2-204ENST00000525207 MBD3L1Q8WWY6 194 aa6.31□□□□□ -1.4
SF3B2-204ENST00000525207 PHLDA3Q9Y5J5 127 aa6.31□□□□□ -1.4
SF3B2-204ENST00000525207 FAT1Q14517 4588 aa6.31□□□□□ -1.4
SF3B2-204ENST00000525207 A0A087WWL8 130 aa6.3□□□□□ -1.4
SF3B2-204ENST00000525207 TMSB15BA0A087X1C1 80 aa6.3□□□□□ -1.4
SF3B2-204ENST00000525207 A0A0D9SG52 128 aa6.3□□□□□ -1.4
SF3B2-204ENST00000525207 A0A1B0GV50 99 aa6.3□□□□□ -1.4
SF3B2-204ENST00000525207 KANTRA0A1W2PQU2 76 aa6.3□□□□□ -1.4
SF3B2-204ENST00000525207 PFDN1O60925 122 aa6.3□□□□□ -1.4
SF3B2-204ENST00000525207 CXCL1P09341 107 aa6.3□□□□□ -1.4
SF3B2-204ENST00000525207 Q8N814 137 aa6.3□□□□□ -1.4
SF3B2-204ENST00000525207 SFT2D1Q8WV19 159 aa6.3□□□□□ -1.4
SF3B2-204ENST00000525207 SFRP2Q96HF1 295 aa6.3□□□□□ -1.4
SF3B2-204ENST00000525207 A0A087WWC5 75 aa6.29□□□□□ -1.4
SF3B2-204ENST00000525207 IGLV5-52A0A0A0MRZ9 124 aa6.29□□□□□ -1.4
SF3B2-204ENST00000525207 EPM2AB3EWF7 344 aa6.29□□□□□ -1.4
SF3B2-204ENST00000525207 GCSHP23434 173 aa6.29□□□□□ -1.4
SF3B2-204ENST00000525207 RPL19P84098 196 aaKnown RBP6.29□□□□□ -1.4
SF3B2-204ENST00000525207 MLST8Q9BVC4 326 aa6.29□□□□□ -1.4
SF3B2-204ENST00000525207 TRBV10-1A0A0K0K1A3 114 aa6.28□□□□□ -1.4
SF3B2-204ENST00000525207 S100A9P06702 114 aaKnown RBP6.28□□□□□ -1.4
SF3B2-204ENST00000525207 H2AFB1P0C5Y9 115 aa6.28□□□□□ -1.4
SF3B2-204ENST00000525207 EIF5AP63241 154 aaKnown RBP6.28□□□□□ -1.4
SF3B2-204ENST00000525207 WFDC2Q14508 124 aa6.28□□□□□ -1.4
SF3B2-204ENST00000525207 DAZ4Q86SG3 579 aaKnown RBP6.28□□□□□ -1.4
SF3B2-204ENST00000525207 OR10AG1Q8NH19 301 aa6.28□□□□□ -1.4
SF3B2-204ENST00000525207 TMEM70Q9BUB7 260 aa6.28□□□□□ -1.4
SF3B2-204ENST00000525207 TM2D2Q9BX73 214 aa6.28□□□□□ -1.4
SF3B2-204ENST00000525207 DAZ3Q9NR90 486 aaKnown RBP6.28□□□□□ -1.4
SF3B2-204ENST00000525207 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
SF3B2-204ENST00000525207 SNAI2O43623 268 aa6.27□□□□□ -1.41
SF3B2-204ENST00000525207 UBE2D3P61077 147 aa6.27□□□□□ -1.41
SF3B2-204ENST00000525207 UBE2D2P62837 147 aa6.27□□□□□ -1.41
SF3B2-204ENST00000525207 TOR2AQ5JU69 321 aa6.27□□□□□ -1.41
SF3B2-204ENST00000525207 Q5VSD8 79 aa6.27□□□□□ -1.41
SF3B2-204ENST00000525207 NIT1Q86X76 327 aa6.27□□□□□ -1.41
SF3B2-204ENST00000525207 BAGE2Q86Y30 109 aa6.27□□□□□ -1.41
SF3B2-204ENST00000525207 C11orf52Q96A22 123 aa6.27□□□□□ -1.41
SF3B2-204ENST00000525207 MANBALQ9NQG1 85 aa6.27□□□□□ -1.41
SF3B2-204ENST00000525207 OR5AL1P0C617 328 aa6.26□□□□□ -1.41
SF3B2-204ENST00000525207 RPL35P42766 123 aaKnown RBP6.26□□□□□ -1.41
SF3B2-204ENST00000525207 HAMPP81172 84 aa6.26□□□□□ -1.41
SF3B2-204ENST00000525207 RPL36AP83881 106 aaKnown RBP6.26□□□□□ -1.41
SF3B2-204ENST00000525207 ZNF56Q15929 161 aa6.26□□□□□ -1.41
SF3B2-204ENST00000525207 PRR27Q6MZM9 219 aa6.26□□□□□ -1.41
SF3B2-204ENST00000525207 TMUB2Q71RG4 321 aa6.26□□□□□ -1.41
SF3B2-204ENST00000525207 OR10G8Q8NGN5 311 aa6.26□□□□□ -1.41
SF3B2-204ENST00000525207 FRZBQ92765 325 aa6.26□□□□□ -1.41
SF3B2-204ENST00000525207 RPL36ALQ969Q0 106 aaKnown RBP6.26□□□□□ -1.41
SF3B2-204ENST00000525207 CHCHD7Q9BUK0 85 aa6.26□□□□□ -1.41
SF3B2-204ENST00000525207 DERL1Q9BUN8 251 aa6.26□□□□□ -1.41
SF3B2-204ENST00000525207 URGCP-MRPS24S4R325 110 aa6.26□□□□□ -1.41
SF3B2-204ENST00000525207 TRBV7-3A0A075B6L6 115 aa6.25□□□□□ -1.41
SF3B2-204ENST00000525207 TRAV1-1A0A0B4J248 108 aa6.25□□□□□ -1.41
SF3B2-204ENST00000525207 TMEM238LA0A1B0GVL6 79 aa6.25□□□□□ -1.41
SF3B2-204ENST00000525207 RAB4BP61018 213 aa6.25□□□□□ -1.41
SF3B2-204ENST00000525207 NEXN-AS1Q8NBZ9 246 aa6.25□□□□□ -1.41
SF3B2-204ENST00000525207 SSBP4Q9BWG4 385 aaPredicted RBP6.25□□□□□ -1.41
SF3B2-204ENST00000525207 GNG13Q9P2W3 67 aa6.25□□□□□ -1.41
SF3B2-204ENST00000525207 DNAH8Q96JB1 4490 aa6.25□□□□□ -1.41
SF3B2-204ENST00000525207 LECT2O14960 151 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 RAB5CP51148 216 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 CCL20P78556 96 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 CENPWQ5EE01 88 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 SPANXN1Q5VSR9 72 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 Q6ZSA8 131 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 RMI2Q96E14 147 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 DNAJC30Q96LL9 226 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 AP1S3Q96PC3 154 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 MRPL18Q9H0U6 180 aaKnown RBP6.24□□□□□ -1.41
SF3B2-204ENST00000525207 KLK12Q9UKR0 248 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 COX11Q9Y6N1 276 aa6.24□□□□□ -1.41
SF3B2-204ENST00000525207 DMBT1Q9UGM3 2413 aaPredicted RBP6.23□□□□□ -1.41
SF3B2-204ENST00000525207 A0A087WX48 190 aa6.23□□□□□ -1.41
SF3B2-204ENST00000525207 TRBV6-8A0A0A6YYG3 113 aa6.23□□□□□ -1.41
SF3B2-204ENST00000525207 MUC21A0A0G2JKD1 596 aa6.23□□□□□ -1.41
SF3B2-204ENST00000525207 MUC21A0A140T8X8 626 aa6.23□□□□□ -1.41
SF3B2-204ENST00000525207 IGLV2-8P01709 118 aa6.23□□□□□ -1.41
SF3B2-204ENST00000525207 C1QBP02746 253 aa6.23□□□□□ -1.41
SF3B2-204ENST00000525207 SMR3BP02814 79 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms