RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 LRP1BQ9NZR2 4599 aa8.62□□□□□ -1.03
SMCO4-202ENST00000525141 XKRY2A2RUG3 117 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 K7EN84 100 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 PAX4O43316 350 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 SNAI2O43623 268 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 P01737 135 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 CEBPGP53567 150 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 FAM74A3Q4VXF1 159 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 ZFP2Q6ZN57 461 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 NUDT10Q8NFP7 164 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 NUDT11Q96G61 164 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 ABCA13Q86UQ4 5058 aa8.61□□□□□ -1.03
SMCO4-202ENST00000525141 GATA1P15976 413 aaPredicted RBP8.6□□□□□ -1.03
SMCO4-202ENST00000525141 IFITM2Q01629 132 aa8.6□□□□□ -1.03
SMCO4-202ENST00000525141 CLLU1Q5K131 121 aa8.6□□□□□ -1.03
SMCO4-202ENST00000525141 ZFP82Q8N141 532 aa8.6□□□□□ -1.03
SMCO4-202ENST00000525141 OR2D3Q8NGH3 330 aa8.6□□□□□ -1.03
SMCO4-202ENST00000525141 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
SMCO4-202ENST00000525141 MRPS16Q9Y3D3 137 aaKnown RBP8.6□□□□□ -1.03
SMCO4-202ENST00000525141 HSPG2P98160 4391 aa8.59□□□□□ -1.03
SMCO4-202ENST00000525141 TRBV6-4A0A1B0GX49 114 aa8.59□□□□□ -1.03
SMCO4-202ENST00000525141 NXPH4O95158 308 aa8.59□□□□□ -1.03
SMCO4-202ENST00000525141 SRSF3P84103 164 aaKnown RBP8.59□□□□□ -1.03
SMCO4-202ENST00000525141 MRPL23Q16540 153 aaKnown RBP8.59□□□□□ -1.03
SMCO4-202ENST00000525141 FAM231DQ6ZW35 169 aa8.59□□□□□ -1.03
SMCO4-202ENST00000525141 SFRP2Q96HF1 295 aa8.59□□□□□ -1.03
SMCO4-202ENST00000525141 ICOSQ9Y6W8 199 aa8.59□□□□□ -1.03
SMCO4-202ENST00000525141 C9JQL5 133 aa8.58□□□□□ -1.04
SMCO4-202ENST00000525141 F2Z2F3 143 aa8.58□□□□□ -1.04
SMCO4-202ENST00000525141 M0R381 172 aa8.58□□□□□ -1.04
SMCO4-202ENST00000525141 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
SMCO4-202ENST00000525141 TMEM241Q24JQ0 296 aa8.58□□□□□ -1.04
SMCO4-202ENST00000525141 UFSP1Q6NVU6 142 aa8.58□□□□□ -1.04
SMCO4-202ENST00000525141 LYPD5Q6UWN5 251 aa8.58□□□□□ -1.04
SMCO4-202ENST00000525141 LINC01551Q86U37 167 aa8.58□□□□□ -1.04
SMCO4-202ENST00000525141 RNASE7Q9H1E1 156 aaKnown RBP8.58□□□□□ -1.04
SMCO4-202ENST00000525141 A0A1W2PPQ1 181 aa8.57□□□□□ -1.04
SMCO4-202ENST00000525141 RHODO00212 210 aa8.57□□□□□ -1.04
SMCO4-202ENST00000525141 GZMBP10144 247 aa8.57□□□□□ -1.04
SMCO4-202ENST00000525141 SPANXN1Q5VSR9 72 aa8.57□□□□□ -1.04
SMCO4-202ENST00000525141 WDR73Q6P4I2 378 aa8.57□□□□□ -1.04
SMCO4-202ENST00000525141 SLC25A29Q8N8R3 303 aa8.57□□□□□ -1.04
SMCO4-202ENST00000525141 FER1L6-AS1Q8NA97 138 aa8.57□□□□□ -1.04
SMCO4-202ENST00000525141 OR10AG1Q8NH19 301 aa8.57□□□□□ -1.04
SMCO4-202ENST00000525141 RPP21Q9H633 154 aaKnown RBP8.57□□□□□ -1.04
SMCO4-202ENST00000525141 JPT2Q9H910 190 aa8.57□□□□□ -1.04
SMCO4-202ENST00000525141 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
SMCO4-202ENST00000525141 K7EQD1 137 aa8.56□□□□□ -1.04
SMCO4-202ENST00000525141 CRYGDP07320 174 aa8.56□□□□□ -1.04
SMCO4-202ENST00000525141 GYPEP15421 78 aa8.56□□□□□ -1.04
SMCO4-202ENST00000525141 ERVFC1-1P60608 527 aa8.56□□□□□ -1.04
SMCO4-202ENST00000525141 SH2D6Q7Z4S9 175 aa8.56□□□□□ -1.04
SMCO4-202ENST00000525141 PRADC1Q9BSG0 188 aa8.56□□□□□ -1.04
SMCO4-202ENST00000525141 SAMD10Q9BYL1 202 aa8.56□□□□□ -1.04
SMCO4-202ENST00000525141 OSTCQ9NRP0 149 aa8.56□□□□□ -1.04
SMCO4-202ENST00000525141 TNFRSF18Q9Y5U5 241 aa8.56□□□□□ -1.04
SMCO4-202ENST00000525141 IGHV3-73A0A0B4J1V6 119 aa8.55□□□□□ -1.04
SMCO4-202ENST00000525141 A8MWL6 223 aa8.55□□□□□ -1.04
SMCO4-202ENST00000525141 GATCO43716 136 aaKnown RBP8.55□□□□□ -1.04
SMCO4-202ENST00000525141 CACNG7P62955 275 aa8.55□□□□□ -1.04
SMCO4-202ENST00000525141 RHOHQ15669 191 aa8.55□□□□□ -1.04
SMCO4-202ENST00000525141 CT83Q5H943 113 aa8.55□□□□□ -1.04
SMCO4-202ENST00000525141 Q6ZRN7 208 aaPredicted RBP8.55□□□□□ -1.04
SMCO4-202ENST00000525141 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
SMCO4-202ENST00000525141 NAT8Q9UHE5 227 aa8.55□□□□□ -1.04
SMCO4-202ENST00000525141 APOBP04114 4563 aaKnown RBP8.55□□□□□ -1.04
SMCO4-202ENST00000525141 SRIP30626 198 aa8.54□□□□□ -1.04
SMCO4-202ENST00000525141 FOXA3P55318 350 aaPredicted RBP8.54□□□□□ -1.04
SMCO4-202ENST00000525141 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
SMCO4-202ENST00000525141 RPL23P62829 140 aaKnown RBP8.54□□□□□ -1.04
SMCO4-202ENST00000525141 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
SMCO4-202ENST00000525141 Q6ZSN1 163 aa8.54□□□□□ -1.04
SMCO4-202ENST00000525141 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
SMCO4-202ENST00000525141 A0A087WWL8 130 aa8.53□□□□□ -1.04
SMCO4-202ENST00000525141 MUC21A0A0G2JKD1 596 aa8.53□□□□□ -1.04
SMCO4-202ENST00000525141 MUC21A0A140T8X8 626 aa8.53□□□□□ -1.04
SMCO4-202ENST00000525141 FAM231BA6NCW3 169 aa8.53□□□□□ -1.04
SMCO4-202ENST00000525141 CTRLP40313 264 aa8.53□□□□□ -1.04
SMCO4-202ENST00000525141 FAM74A4Q5TZK3 123 aa8.53□□□□□ -1.04
SMCO4-202ENST00000525141 ISOC2Q96AB3 205 aa8.53□□□□□ -1.04
SMCO4-202ENST00000525141 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
SMCO4-202ENST00000525141 LOC100131303A0A0U1RQF7 123 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 C16orf90A8MZG2 172 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 SIVA1O15304 175 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 BTF3P20290 206 aaKnown RBP8.52□□□□□ -1.05
SMCO4-202ENST00000525141 NTF3P20783 257 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 RAB4BP61018 213 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 SSTP61278 116 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 TTC32Q5I0X7 151 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 SPATA12Q7Z6I5 190 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 C15orf54Q8N8G6 183 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 GTSF1Q8WW33 167 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 AP1S3Q96PC3 154 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 GFRA4Q9GZZ7 299 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 KIF25-AS1Q9Y6Z4 181 aa8.52□□□□□ -1.05
SMCO4-202ENST00000525141 SMIM17P0DL12 118 aa8.51□□□□□ -1.05
SMCO4-202ENST00000525141 TIRAPP58753 221 aa8.51□□□□□ -1.05
SMCO4-202ENST00000525141 LINC00315P59091 139 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms