RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 M0R143 59 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 PAX4O43316 350 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 TCRAP04437 139 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 CCL20P78556 96 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 FHL2Q14192 279 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 TDRG1Q3Y452 100 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 DPPA3Q6W0C5 159 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 C6orf223Q8N319 242 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 Q9H8V8 135 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 ZNF726P1Q15940 193 aa7.71□□□□□ -1.18
TRAPPC4-204ENST00000524797 OR2D3Q8NGH3 330 aa7.71□□□□□ -1.18
TRAPPC4-204ENST00000524797 SGK494Q96LW2 274 aa7.71□□□□□ -1.18
TRAPPC4-204ENST00000524797 CTDSP1Q9GZU7 261 aa7.71□□□□□ -1.18
TRAPPC4-204ENST00000524797 ICOSQ9Y6W8 199 aa7.71□□□□□ -1.18
TRAPPC4-204ENST00000524797 PKD1P98161 4303 aa7.71□□□□□ -1.18
TRAPPC4-204ENST00000524797 DYNC1H1Q14204 4646 aaKnown RBP7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 IGHV3-16A0A0C4DH30 117 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 CTXND1A0A1B0GTU2 59 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 GGTLC3B5MD39 225 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 EREGO14944 169 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 GNRH2O43555 120 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 TYMSP04818 313 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 CRYBA4P53673 196 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 C8orf49Q96NF6 230 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 NDFIP1Q9BT67 221 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 PRO0255Q9UI72 69 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 EPDR1Q9UM22 224 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 PSG8Q9UQ74 426 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 HERC2O95714 4834 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 K7EQM0 130 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 SUMO1P63165 101 aaKnown RBP7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 SLAQ13239 276 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 ODF1Q14990 250 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 IQCJQ1A5X6 159 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 COA6Q5JTJ3 125 aaKnown RBP7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 RASL10AQ92737 203 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 SDF2L1Q9HCN8 221 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 VAX2Q9UIW0 290 aa7.7□□□□□ -1.18
TRAPPC4-204ENST00000524797 DNAH11Q96DT5 4516 aa7.69□□□□□ -1.18
TRAPPC4-204ENST00000524797 TRGV4A0A0C4DH28 118 aa7.69□□□□□ -1.18
TRAPPC4-204ENST00000524797 A0A1W2PRE2 83 aa7.69□□□□□ -1.18
TRAPPC4-204ENST00000524797 IGLV2-11P01706 119 aa7.69□□□□□ -1.18
TRAPPC4-204ENST00000524797 ZNF80P51504 273 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC4-204ENST00000524797 TNP2Q05952 138 aa7.69□□□□□ -1.18
TRAPPC4-204ENST00000524797 TTC32Q5I0X7 151 aa7.69□□□□□ -1.18
TRAPPC4-204ENST00000524797 ZNF479Q96JC4 524 aa7.69□□□□□ -1.18
TRAPPC4-204ENST00000524797 KRTAP1-5Q9BYS1 174 aa7.69□□□□□ -1.18
TRAPPC4-204ENST00000524797 HHLA3Q9XRX5 114 aa7.69□□□□□ -1.18
TRAPPC4-204ENST00000524797 M0R2P5 195 aa7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 ERVFC1-1P60608 527 aa7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 TMEM75Q8N9X5 138 aa7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 TMEM18Q96B42 140 aa7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 NUDT11Q96G61 164 aa7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 KCNS1Q96KK3 526 aa7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 SNHG12Q9BXW3 62 aa7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 C11orf21Q9P2W6 132 aa7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 TRAV4A0A0B4J268 109 aa7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 FGF8P55075 233 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 PRNTQ86SH4 94 aa7.68□□□□□ -1.18
TRAPPC4-204ENST00000524797 TRAV1-1A0A0B4J248 108 aa7.67□□□□□ -1.18
TRAPPC4-204ENST00000524797 FBLL1A6NHQ2 334 aaKnown RBP7.67□□□□□ -1.18
TRAPPC4-204ENST00000524797 UBE2G2P60604 165 aa7.67□□□□□ -1.18
TRAPPC4-204ENST00000524797 MRPL23Q16540 153 aaKnown RBP7.67□□□□□ -1.18
TRAPPC4-204ENST00000524797 NXPH4O95158 308 aa7.66□□□□□ -1.18
TRAPPC4-204ENST00000524797 OR4C5Q8NGB2 326 aa7.66□□□□□ -1.18
TRAPPC4-204ENST00000524797 TRAV34A0A0B4J273 112 aa7.66□□□□□ -1.18
TRAPPC4-204ENST00000524797 MAP1LC3B2A6NCE7 125 aa7.66□□□□□ -1.18
TRAPPC4-204ENST00000524797 PFN1P07737 140 aaKnown RBP7.66□□□□□ -1.18
TRAPPC4-204ENST00000524797 LYPD5Q6UWN5 251 aa7.66□□□□□ -1.18
TRAPPC4-204ENST00000524797 ZNF575Q86XF7 245 aa7.66□□□□□ -1.18
TRAPPC4-204ENST00000524797 LINC00479Q96M42 142 aa7.66□□□□□ -1.18
TRAPPC4-204ENST00000524797 MAP1LC3BQ9GZQ8 125 aa7.66□□□□□ -1.18
TRAPPC4-204ENST00000524797 GNG13Q9P2W3 67 aa7.66□□□□□ -1.18
TRAPPC4-204ENST00000524797 PEX7O00628 323 aa7.65□□□□□ -1.18
TRAPPC4-204ENST00000524797 SIVA1O15304 175 aa7.65□□□□□ -1.18
TRAPPC4-204ENST00000524797 BCL2P10415 239 aa7.65□□□□□ -1.18
TRAPPC4-204ENST00000524797 GYPEP15421 78 aa7.65□□□□□ -1.18
TRAPPC4-204ENST00000524797 NEGR1Q7Z3B1 354 aa7.65□□□□□ -1.18
TRAPPC4-204ENST00000524797 C9orf85Q96MD7 179 aa7.65□□□□□ -1.18
TRAPPC4-204ENST00000524797 ARL2-SNX15V9GYD0 113 aa7.65□□□□□ -1.18
TRAPPC4-204ENST00000524797 PKHD1P08F94 4074 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 K7EQD1 137 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 IFNA1P01562 189 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 ORM1P02763 201 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 SRIP30626 198 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 Q86TA4 180 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 RS1O15537 224 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 SCGB1D1O95968 90 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 MED14OSP0DP75 135 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 PTH2Q96A98 100 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 NAT8Q9UHE5 227 aa7.64□□□□□ -1.19
TRAPPC4-204ENST00000524797 LOC100131303A0A0U1RQF7 123 aa7.63□□□□□ -1.19
TRAPPC4-204ENST00000524797 C9JCJ5 164 aa7.63□□□□□ -1.19
TRAPPC4-204ENST00000524797 GATA1P15976 413 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC4-204ENST00000524797 KIAA1109Q2LD37 5005 aa7.63□□□□□ -1.19
TRAPPC4-204ENST00000524797 PGPEP1LA6NFU8 196 aa7.62□□□□□ -1.19
TRAPPC4-204ENST00000524797 RNASE3P12724 160 aaKnown RBP7.62□□□□□ -1.19
TRAPPC4-204ENST00000524797 LINC00315P59091 139 aa7.62□□□□□ -1.19
TRAPPC4-204ENST00000524797 ZNF876PQ49A33 203 aa7.62□□□□□ -1.19
TRAPPC4-204ENST00000524797 IGKV3D-20A0A0C4DH25 116 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms