RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 VCYO14598 125 aa7.3□□□□□ -1.24
VPS13B-212ENST00000524330 CIDEAO60543 219 aa7.3□□□□□ -1.24
VPS13B-212ENST00000524330 ATP5LO75964 103 aa7.3□□□□□ -1.24
VPS13B-212ENST00000524330 RPL35AP18077 110 aaKnown RBP7.3□□□□□ -1.24
VPS13B-212ENST00000524330 FAM74A4Q5TZK3 123 aa7.3□□□□□ -1.24
VPS13B-212ENST00000524330 NRACQ8N912 160 aa7.3□□□□□ -1.24
VPS13B-212ENST00000524330 WFDC9Q8NEX5 89 aa7.3□□□□□ -1.24
VPS13B-212ENST00000524330 TMEM263Q8WUH6 116 aaKnown RBP7.3□□□□□ -1.24
VPS13B-212ENST00000524330 URB1-AS1Q96HZ7 61 aa7.3□□□□□ -1.24
VPS13B-212ENST00000524330 KIR2DL4Q99706 377 aa7.3□□□□□ -1.24
VPS13B-212ENST00000524330 VAMP8Q9BV40 100 aa7.3□□□□□ -1.24
VPS13B-212ENST00000524330 CSTL1Q9H114 145 aa7.3□□□□□ -1.24
VPS13B-212ENST00000524330 IGHV3OR16-12A0A075B7B8 117 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 PCP4L1A6NKN8 68 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 NUDT3O95989 172 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 RBMY1A1P0DJD3 496 aaKnown RBP7.29□□□□□ -1.24
VPS13B-212ENST00000524330 RBMY1CP0DJD4 496 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 APOC4P55056 127 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 RBMY1FQ15415 496 aaKnown RBP7.29□□□□□ -1.24
VPS13B-212ENST00000524330 RRN3P1Q2M238 152 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 LGALS9BQ3B8N2 356 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 SUMO4Q6EEV6 95 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 C19orf73Q9NVV2 129 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 KIF25-AS1Q9Y6Z4 181 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 SVEP1Q4LDE5 3571 aa7.29□□□□□ -1.24
VPS13B-212ENST00000524330 A0A087WWL8 130 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 TRAV26-2A0A0B4J265 109 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 TRBV6-5A0A0K0K1A5 114 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 SMIM9A6NGZ8 99 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 SYS1-DBNDD2H3BUS1 97 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 ZFP2Q6ZN57 461 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 C1orf158Q8N1D5 194 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 RASL10AQ92737 203 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 DNAJC30Q96LL9 226 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 EDA2RQ9HAV5 297 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 ANK3Q12955 4377 aaKnown RBP7.28□□□□□ -1.24
VPS13B-212ENST00000524330 CSMD1Q96PZ7 3565 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 AGRNO00468 2067 aa7.28□□□□□ -1.24
VPS13B-212ENST00000524330 KIR2DL5BA0A0G2JN68 375 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 KIR2DL5BA0A0G2JPC4 375 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 WIPF1O43516 503 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 CRYGDP07320 174 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 GATA1P15976 413 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-212ENST00000524330 KRTAP24-1Q3LI83 254 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 TEX43Q6ZNM6 134 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 SPATA12Q7Z6I5 190 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 KIR2DL5AQ8N109 375 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 KIR2DL5BQ8NHK3 375 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 IFI27L1Q96BM0 104 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 FN1P02751 2386 aaKnown RBP7.27□□□□□ -1.25
VPS13B-212ENST00000524330 WNK1Q9H4A3 2382 aa7.27□□□□□ -1.25
VPS13B-212ENST00000524330 ZNF469Q96JG9 3925 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-212ENST00000524330 RS1O15537 224 aa7.26□□□□□ -1.25
VPS13B-212ENST00000524330 SPRY2O43597 315 aa7.26□□□□□ -1.25
VPS13B-212ENST00000524330 AZU1P20160 251 aa7.26□□□□□ -1.25
VPS13B-212ENST00000524330 DAZ2Q13117 558 aaKnown RBP7.26□□□□□ -1.25
VPS13B-212ENST00000524330 ZNF705AQ6ZN79 300 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-212ENST00000524330 C11orf72Q8NBR9 251 aa7.26□□□□□ -1.25
VPS13B-212ENST00000524330 OR4C5Q8NGB2 326 aa7.26□□□□□ -1.25
VPS13B-212ENST00000524330 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
VPS13B-212ENST00000524330 OTOGQ6ZRI0 2925 aa7.25□□□□□ -1.25
VPS13B-212ENST00000524330 IGLV2-18A0A075B6J9 118 aa7.25□□□□□ -1.25
VPS13B-212ENST00000524330 TRGV1A0A0A0MS02 117 aa7.25□□□□□ -1.25
VPS13B-212ENST00000524330 LINC00315P59091 139 aa7.25□□□□□ -1.25
VPS13B-212ENST00000524330 RHOHQ15669 191 aa7.25□□□□□ -1.25
VPS13B-212ENST00000524330 LGALS9CQ6DKI2 356 aa7.25□□□□□ -1.25
VPS13B-212ENST00000524330 Q6ZN92 141 aa7.25□□□□□ -1.25
VPS13B-212ENST00000524330 RNASE8Q8TDE3 154 aaKnown RBP7.25□□□□□ -1.25
VPS13B-212ENST00000524330 RPL39LQ96EH5 51 aaKnown RBP7.25□□□□□ -1.25
VPS13B-212ENST00000524330 JPT2Q9H910 190 aa7.25□□□□□ -1.25
VPS13B-212ENST00000524330 CYSLTR1Q9Y271 337 aa7.25□□□□□ -1.25
VPS13B-212ENST00000524330 SORL1Q92673 2214 aa7.25□□□□□ -1.25
VPS13B-212ENST00000524330 TRAV9-2A0A087WT02 112 aa7.24□□□□□ -1.25
VPS13B-212ENST00000524330 TRAV4A0A0B4J268 109 aa7.24□□□□□ -1.25
VPS13B-212ENST00000524330 SDHAF1A6NFY7 115 aa7.24□□□□□ -1.25
VPS13B-212ENST00000524330 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-212ENST00000524330 I3L3M4 83 aa7.24□□□□□ -1.25
VPS13B-212ENST00000524330 M0QY20 66 aa7.24□□□□□ -1.25
VPS13B-212ENST00000524330 PRSS1P07477 247 aa7.24□□□□□ -1.25
VPS13B-212ENST00000524330 IGLL1P15814 213 aa7.24□□□□□ -1.25
VPS13B-212ENST00000524330 SMAGPQ0VAQ4 97 aa7.24□□□□□ -1.25
VPS13B-212ENST00000524330 CFAP126Q5VTH2 177 aa7.24□□□□□ -1.25
VPS13B-212ENST00000524330 MRPL16Q9NX20 251 aaKnown RBP7.24□□□□□ -1.25
VPS13B-212ENST00000524330 ZFHX3Q15911 3703 aa7.24□□□□□ -1.25
VPS13B-212ENST00000524330 C2CD3Q4AC94 2353 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 NSD1Q96L73 2696 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-212ENST00000524330 TRBV27A0A0K0K1C4 114 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 H0Y8G0 127 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 GAS8-AS1O95177 125 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 IGHV3-53P01767 116 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 POLR2KP53803 58 aaKnown RBP7.23□□□□□ -1.25
VPS13B-212ENST00000524330 SPATA45Q537H7 98 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 LINC01545Q5VT33 79 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 SCGB3A1Q96QR1 104 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 OVOL2Q9BRP0 275 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 WFDC10AQ9H1F0 79 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 MUC4Q99102 2169 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 F8P00451 2351 aa7.23□□□□□ -1.25
VPS13B-212ENST00000524330 HIVEP1P15822 2718 aa7.22□□□□□ -1.25
VPS13B-212ENST00000524330 TRGV2A0A075B6R0 118 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms