RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 TSHBP01222 138 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 ZNRF2Q8NHG8 242 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 ZFAND3Q9H8U3 227 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 IGHV4OR15-8A0A075B7B6 117 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 A0A087WW49 117 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 K7ENP7 123 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 CCL8P80075 99 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 DEFB104AQ8WTQ1 72 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 CFHR4Q92496 578 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 IGHV3OR16-8A0A075B7F1 116 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 J3QQQ9 107 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 UQCRQO14949 82 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 IGLV1-47P01700 117 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 CRYGAP11844 174 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 MFAP4P55083 255 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 SLC50A1Q9BRV3 221 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 TRAV17A0A0B4J275 112 aa6.36□□□□□ -1.39
CSMD1-213ENST00000523488 TRAV25A0A0B4J276 109 aa6.36□□□□□ -1.39
CSMD1-213ENST00000523488 LINC00526Q96FQ7 95 aa6.36□□□□□ -1.39
CSMD1-213ENST00000523488 IGHV3-35A0A0C4DH35 117 aa6.36□□□□□ -1.39
CSMD1-213ENST00000523488 KLK5Q9Y337 293 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-213ENST00000523488 LENEPQ9Y5L5 61 aa6.36□□□□□ -1.39
CSMD1-213ENST00000523488 FRYQ5TBA9 3013 aa6.36□□□□□ -1.39
CSMD1-213ENST00000523488 ZNF883P0CG24 379 aa6.36□□□□□ -1.39
CSMD1-213ENST00000523488 IGFL2Q6UWQ7 119 aa6.36□□□□□ -1.39
CSMD1-213ENST00000523488 MUSTN1Q8IVN3 82 aa6.36□□□□□ -1.39
CSMD1-213ENST00000523488 NPBQ8NG41 125 aa6.36□□□□□ -1.39
CSMD1-213ENST00000523488 IGHV3-64A0A075B6Q5 118 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 IGKV3D-20A0A0C4DH25 116 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 NUP37Q8NFH4 326 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 PRB3Q04118 309 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-213ENST00000523488 GPHB5Q86YW7 130 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 DYNAPQ8N1N2 210 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 LINC00527Q9UJ94 153 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 PHLDA3Q9Y5J5 127 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 KIF25-AS1Q9Y6Z4 181 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 TRAV8-3A0A0A6YYJ7 113 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 A0A0G2JNJ9 132 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 C17orf100A8MU93 164 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 IGHV3-23P01764 117 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 ACYP1P07311 99 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 GFRALQ6UXV0 394 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 C14orf178Q8N769 122 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-213ENST00000523488 TIMM17AQ99595 171 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 Q9UFV3 132 aa6.35□□□□□ -1.39
CSMD1-213ENST00000523488 SONP18583 2426 aaKnown RBP6.35□□□□□ -1.39
CSMD1-213ENST00000523488 OVOL1O14753 267 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 CCL17Q92583 94 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 MSRB2Q9Y3D2 182 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 MGAQ8IWI9 3026 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 IGLV11-55A0A075B6I3 123 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 IGHV1-46P01743 117 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 COX7A1P24310 79 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 LINC00315P59091 139 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 C9orf47Q6ZRZ4 202 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 DCANP1Q8TF63 244 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 RPL39LQ96EH5 51 aaKnown RBP6.34□□□□□ -1.39
CSMD1-213ENST00000523488 TP53TG1Q9Y2A0 90 aa6.34□□□□□ -1.39
CSMD1-213ENST00000523488 F5H697 171 aa6.34□□□□□ -1.4
CSMD1-213ENST00000523488 CDX4O14627 284 aaPredicted RBP6.34□□□□□ -1.4
CSMD1-213ENST00000523488 KLRB1Q12918 225 aa6.34□□□□□ -1.4
CSMD1-213ENST00000523488 BEAN1Q3B7T3 259 aa6.34□□□□□ -1.4
CSMD1-213ENST00000523488 C11orf21Q9P2W6 132 aa6.34□□□□□ -1.4
CSMD1-213ENST00000523488 U3KQE9 123 aa6.34□□□□□ -1.4
CSMD1-213ENST00000523488 ABCA2Q9BZC7 2435 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 MALRD1Q5VYJ5 2156 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 TMEM223A0PJW6 202 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 ELANEP08246 267 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 ZNF876PQ49A33 203 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 RNF152Q8N8N0 203 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 C22orf24Q9Y442 160 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 PPP1R17O96001 155 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 IGHV1-69P01742 117 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 TRACP01848 142 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 TSPEAR-AS2P59090 65 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 UPK3BQ9BT76 320 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 DPH3P1Q9H4G8 78 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 ARHGAP32A7KAX9 2087 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 IGHV3OR16-13A0A075B7E8 117 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 IGHV3-74A0A0B4J1X5 117 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 TRBV6-5A0A0K0K1A5 114 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 PRAC2D3DTV9 90 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 TRIAP1O43715 76 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 ZNF22P17026 224 aaPredicted RBP6.33□□□□□ -1.4
CSMD1-213ENST00000523488 RNF182Q8N6D2 247 aa6.33□□□□□ -1.4
CSMD1-213ENST00000523488 SPRY2O43597 315 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 TMEM141Q96I45 108 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 MYO9AB2RTY4 2548 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 IGHV3-66A0A0C4DH42 116 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 TMEM219Q86XT9 240 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 C9orf106Q8NAJ2 232 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 METTL26Q96S19 204 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 TRAV41A0A0B4J266 112 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 TRAV12-3A0A0B4J271 114 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 F5H768 121 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 H7C423 109 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 CEMP1Q6PRD7 247 aaPredicted RBP6.32□□□□□ -1.4
CSMD1-213ENST00000523488 CLEC2BQ92478 149 aa6.32□□□□□ -1.4
CSMD1-213ENST00000523488 ICOSQ9Y6W8 199 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms