RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
CSMD1-212ENST00000523387 IGHG4P01861 327 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 SNRPD3P62318 126 aaKnown RBP6.87□□□□□ -1.31
CSMD1-212ENST00000523387 KLRB1Q12918 225 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 ZFAND3Q9H8U3 227 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 TEX49A0A1B0GTD5 131 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 LEPROTO15243 131 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 HERV-K104P63124 156 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 FOXC1Q12948 553 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 TMEM101Q96IK0 257 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 YAE1D1Q9NRH1 226 aa6.87□□□□□ -1.31
CSMD1-212ENST00000523387 UBE2D3P61077 147 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 UBE2D2P62837 147 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 PRR9Q5T870 116 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 NDUFA12Q9UI09 145 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 C2CD3Q4AC94 2353 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 NPFFO15130 113 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 IGHV3-30P01768 117 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 IGHV3-30-5P0DP03 117 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 LINC01546A6NGU7 62 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
CSMD1-212ENST00000523387 CCDC140Q96MF4 163 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 TIMM17AQ99595 171 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 MOB4Q9Y3A3 225 aa6.86□□□□□ -1.31
CSMD1-212ENST00000523387 MSRB2Q9Y3D2 182 aa6.85□□□□□ -1.31
CSMD1-212ENST00000523387 TRAV12-2A0A075B6T6 113 aa6.85□□□□□ -1.31
CSMD1-212ENST00000523387 TRBV10-2A0A0K0K1G8 114 aa6.85□□□□□ -1.31
CSMD1-212ENST00000523387 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
CSMD1-212ENST00000523387 GRNP28799 593 aaKnown RBP6.85□□□□□ -1.31
CSMD1-212ENST00000523387 LY6G5BQ8NDX9 201 aa6.85□□□□□ -1.31
CSMD1-212ENST00000523387 FAM223BA6NKX1 122 aa6.85□□□□□ -1.31
CSMD1-212ENST00000523387 CCDC179H3BU77 68 aa6.85□□□□□ -1.31
CSMD1-212ENST00000523387 FAM223AQ8IWN6 122 aa6.85□□□□□ -1.31
CSMD1-212ENST00000523387 DUX3Q96PT4 197 aa6.85□□□□□ -1.31
CSMD1-212ENST00000523387 KLK9Q9UKQ9 250 aa6.85□□□□□ -1.31
CSMD1-212ENST00000523387 LINC01548A6NM66 108 aa6.84□□□□□ -1.31
CSMD1-212ENST00000523387 C9orf153Q5TBE3 101 aa6.84□□□□□ -1.31
CSMD1-212ENST00000523387 SPANXA1Q9NS26 97 aa6.84□□□□□ -1.31
CSMD1-212ENST00000523387 IGHV4-4A0A075B6R2 117 aa6.84□□□□□ -1.31
CSMD1-212ENST00000523387 UBE2E1P51965 193 aa6.84□□□□□ -1.31
CSMD1-212ENST00000523387 CRIP2P52943 208 aaPredicted RBP6.84□□□□□ -1.31
CSMD1-212ENST00000523387 BRD3OSQ6XYD6 125 aa6.84□□□□□ -1.31
CSMD1-212ENST00000523387 ZNF625Q96I27 306 aaPredicted RBP6.84□□□□□ -1.31
CSMD1-212ENST00000523387 C20orf173Q96LM9 149 aa6.84□□□□□ -1.31
CSMD1-212ENST00000523387 KHDC1LQ5JSQ8 128 aa6.84□□□□□ -1.31
CSMD1-212ENST00000523387 ZFAND2AQ8N6M9 145 aa6.84□□□□□ -1.31
CSMD1-212ENST00000523387 SPTBN5Q9NRC6 3674 aaKnown RBP6.84□□□□□ -1.31
CSMD1-212ENST00000523387 NACAE9PAV3 2078 aa6.84□□□□□ -1.31
CSMD1-212ENST00000523387 TRBV7-9A0A0J9YWB2 115 aa6.84□□□□□ -1.32
CSMD1-212ENST00000523387 I3L3M4 83 aa6.84□□□□□ -1.32
CSMD1-212ENST00000523387 RHODO00212 210 aa6.84□□□□□ -1.32
CSMD1-212ENST00000523387 ICOSQ9Y6W8 199 aa6.84□□□□□ -1.32
CSMD1-212ENST00000523387 NDUFA4O00483 81 aa6.83□□□□□ -1.32
CSMD1-212ENST00000523387 CLEC2BQ92478 149 aa6.83□□□□□ -1.32
CSMD1-212ENST00000523387 PSMG3-AS1Q96PY0 264 aa6.83□□□□□ -1.32
CSMD1-212ENST00000523387 ODF3BA8MYP8 253 aa6.83□□□□□ -1.32
CSMD1-212ENST00000523387 SPINK13Q1W4C9 94 aa6.83□□□□□ -1.32
CSMD1-212ENST00000523387 UNQ9165/PRO28630Q6UXU0 137 aa6.83□□□□□ -1.32
CSMD1-212ENST00000523387 CSPG4Q6UVK1 2322 aa6.83□□□□□ -1.32
CSMD1-212ENST00000523387 DNAL4O96015 105 aa6.83□□□□□ -1.32
CSMD1-212ENST00000523387 TSPEAR-AS2P59090 65 aa6.83□□□□□ -1.32
CSMD1-212ENST00000523387 RHOHQ15669 191 aa6.83□□□□□ -1.32
CSMD1-212ENST00000523387 DAZ1Q9NQZ3 744 aaKnown RBP6.83□□□□□ -1.32
CSMD1-212ENST00000523387 A0A0B4J2C4 111 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 KNCNA6PVL3 124 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 MED14OSP0DP75 135 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 COPS9Q8WXC6 57 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 DUX5Q96PT3 197 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 CENPVL3A0A0U1RRI6 287 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 BDP1A6H8Y1 2624 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 TRIAP1O43715 76 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 PIP4P1Q86T03 277 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 ZNRF2Q8NHG8 242 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 WDFY4Q6ZS81 3184 aa6.82□□□□□ -1.32
CSMD1-212ENST00000523387 FAM236AA0A1B0GUQ0 79 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 FAM236BA0A1B0GV22 79 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 CLPSL1A2RUU4 121 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 FHL3Q13643 280 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 IGLV4-69A0A075B6H9 119 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 TRGV11A0A075B6L2 103 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 TRBV12-3P01733 135 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 USMG5Q96IX5 58 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 FREM2Q5SZK8 3169 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 A0A0J9YXY3 114 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 IGHV3-30-3P0DP02 117 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 ZFP36P26651 326 aaKnown RBP6.81□□□□□ -1.32
CSMD1-212ENST00000523387 DAND5Q8N907 189 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 CHCHD5Q9BSY4 110 aa6.81□□□□□ -1.32
CSMD1-212ENST00000523387 H3BT86 120 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 CRLF1O75462 422 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 P0DMU3 169 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 FAM231AP0DMU4 169 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 FAM231CP0DMU5 169 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 COX6B1P14854 86 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 BPESC1Q9GZL8 116 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 IGHV1OR15-1A0A075B7D0 117 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 IGIPA6NJ69 53 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 H3BUX3 64 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms