RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 UBE2G2P60604 165 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 ERVFC1-1P60608 527 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 NUTF2P61970 127 aaKnown RBP4.48□□□□□ -1.69
SDCBP-210ENST00000522843 RANP62826 216 aaKnown RBP4.48□□□□□ -1.69
SDCBP-210ENST00000522843 SAMD13Q5VXD3 122 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 ATRAIDQ6UW56 229 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 OR8I2Q8N0Y5 310 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 SMIM7Q9BQ49 75 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 PARLQ9H300 379 aa4.48□□□□□ -1.69
SDCBP-210ENST00000522843 C7orf77A4D0Y5 90 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 RBAKDNA6NC62 111 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 GCGP01275 180 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 TCRAP04437 139 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 SLC25A5P05141 298 aaKnown RBP4.47□□□□□ -1.69
SDCBP-210ENST00000522843 DEFB130BP0DP73 79 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 DEFB130AP0DP74 79 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 RPL35P42766 123 aaKnown RBP4.47□□□□□ -1.69
SDCBP-210ENST00000522843 RPL23P62829 140 aaKnown RBP4.47□□□□□ -1.69
SDCBP-210ENST00000522843 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 LINC01551Q86U37 167 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 IQCF2Q8IXL9 164 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 OCC1Q8TAD7 63 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 IMMP2LQ96T52 175 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 SLC50A1Q9BRV3 221 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 TMEM70Q9BUB7 260 aa4.47□□□□□ -1.69
SDCBP-210ENST00000522843 ZNF331Q9NQX6 463 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-210ENST00000522843 MRPS16Q9Y3D3 137 aaKnown RBP4.47□□□□□ -1.69
SDCBP-210ENST00000522843 TRBV20OR9-2A0A075B6H5 130 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 PEX7O00628 323 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 SOCS3O14543 225 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 PPP1R2P9O14990 202 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 OXTP01178 125 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 LTAP01374 205 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 IGLV2-11P01706 119 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 IGLV2-8P01709 118 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 RRN3P1Q2M238 152 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 FAM231DQ6ZW35 169 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 BLNKQ8WV28 456 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 FMC1Q96HJ9 113 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 IGF2BP2-AS1Q96M15 143 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 YPEL4Q96NS1 127 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 SAV1Q9H4B6 383 aaPredicted RBP4.46□□□□□ -1.7
SDCBP-210ENST00000522843 BIN3Q9NQY0 253 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 SMCO4Q9NRQ5 59 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 ZFP30Q9Y2G7 519 aa4.46□□□□□ -1.7
SDCBP-210ENST00000522843 TRAV8-2A0A0B4J237 113 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 TRBV7-9A0A0J9YWB2 115 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 LYRM9A8MSI8 78 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 ZNF705GA8MUZ8 300 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-210ENST00000522843 F6UB75 175 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 ISLRO14498 428 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 MT-ND4LP03901 98 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 ATP5G1P05496 136 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 AZU1P20160 251 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 CSN1S1P47710 185 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 AMTP48728 403 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 CNN1P51911 297 aaKnown RBP4.45□□□□□ -1.7
SDCBP-210ENST00000522843 PSG3Q16557 428 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 PRR27Q6MZM9 219 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 BAGE2Q86Y30 109 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 TMEM183AQ8IXX5 376 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 TMEM75Q8N9X5 138 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 ISOC2Q96AB3 205 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 PYGO2Q9BRQ0 406 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 DERL1Q9BUN8 251 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 OSTCQ9NRP0 149 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 GOLT1BQ9Y3E0 138 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 LENEPQ9Y5L5 61 aa4.45□□□□□ -1.7
SDCBP-210ENST00000522843 TRAV26-1A0A087WT03 109 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 COLCA2A8K830 154 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 K7EQM0 130 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 M0R036 132 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 SLC17A3O00476 420 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 CRXO43186 299 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-210ENST00000522843 PFN1P07737 140 aaKnown RBP4.44□□□□□ -1.7
SDCBP-210ENST00000522843 MT1HL1P0DM35 61 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 ASIPP42127 132 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 AKR1C3P42330 323 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 GNG4P50150 75 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 FOXA3P55318 350 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-210ENST00000522843 SNRPD3P62318 126 aaKnown RBP4.44□□□□□ -1.7
SDCBP-210ENST00000522843 BTN1A1Q13410 526 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 SAPCD1Q5SSQ6 148 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 AMTNQ6UX39 209 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 EXOC3-AS1Q8N2X6 119 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 C15orf54Q8N8G6 183 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 CMTM2Q8TAZ6 248 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 LINC00477Q96M19 166 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 LINC00479Q96M42 142 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 NRN1Q9NPD7 142 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 RPS10P5Q9NQ39 176 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 ZNF492Q9P255 531 aa4.44□□□□□ -1.7
SDCBP-210ENST00000522843 MUC2Q02817 5179 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 LPAP08519 4548 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 TRBV24-1A0A075B6N3 115 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 TRAV9-1A0A075B6T8 112 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 A0A0J9YY99 117 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 C19orf71A6NCJ1 209 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 FAM231BA6NCW3 169 aa4.43□□□□□ -1.7
SDCBP-210ENST00000522843 A8MTW9 85 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms