RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 LCN6P62502 163 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 ZNF846Q147U1 533 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 C1orf140Q5VVS0 124 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 SAMD13Q5VXD3 122 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 ZCCHC23Q6ZST2 131 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 RPS27LQ71UM5 84 aaKnown RBP1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 DEFB108BQ8NET1 73 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 SLC30A7Q8NEW0 376 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 SLC25A40Q8TBP6 338 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 GPR146Q96CH1 333 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 TMEM70Q9BUB7 260 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 C6orf62Q9GZU0 229 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 LYRM2Q9NU23 88 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 ERGIC3Q9Y282 383 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 HSPB11Q9Y547 144 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 SOX21Q9Y651 276 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 DSPPQ9NZW4 1301 aa1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 ZNF469Q96JG9 3925 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P1-201ENST00000522557 IGKV1-9A0A0C4DH69 117 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 F8W036 122 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 AIPO00170 330 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 DBIP07108 87 aaKnown RBP1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 LINC00032P0C843 101 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 SPI1P17947 270 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 SRP9P49458 86 aaKnown RBP1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 SURF2Q15527 256 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 NDUFA5Q16718 116 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 TMEM128Q5BJH2 165 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 FP248Q71RG6 208 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 CLVS1Q8IUQ0 354 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR10J5Q8NHC4 309 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 MBD3L1Q8WWY6 194 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 BORCS5Q969J3 196 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 PPP3R2Q96LZ3 170 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 SH3BGRL3Q9H299 93 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 TVP23BQ9NYZ1 205 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 CALML5Q9NZT1 146 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 GSKIPQ9P0R6 139 aa1.57□□□□□ -2.16
HMGB1P1-201ENST00000522557 MEIKINA0A087WXM9 373 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 TCRBV4S1A1TA0A5B7 111 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 J3QRK9 145 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 K7EIL1 84 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 ARPC5O15511 151 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 NDUFA2O43678 99 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 ORC5O43913 435 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 IFNA7P01567 189 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 APOA2P02652 100 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 PMP2P02689 132 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 SCGB1A1P11684 91 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 CRYGAP11844 174 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 S100A3P33764 101 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 AKR1C3P42330 323 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 ATP5G3P48201 142 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 PCBD1P61457 104 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 GNG11P61952 73 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 RPL38P63173 70 aaKnown RBP1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 TMEM78Q5T7P6 136 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 CROCCP2Q86T23 111 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 NDUFA11Q86Y39 141 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 BPIFA4PQ86YQ2 179 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 LRRC18Q8N456 261 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 WFDC9Q8NEX5 89 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR5D16Q8NGK9 328 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 CCDC32Q9BV29 185 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR2J1Q9GZK6 312 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 YIPF3Q9GZM5 350 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 CKLFQ9UBR5 152 aa1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 ANK3Q12955 4377 aaKnown RBP1.56□□□□□ -2.16
HMGB1P1-201ENST00000522557 HRNRQ86YZ3 2850 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 TRGV2A0A075B6R0 118 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 TRAV36DV7A0A075B6V5 113 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 A0A0D9SG52 128 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 A0A1W2PRE2 83 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 PRORSD1PA6NEY8 169 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 RIIAD1A6NNX1 92 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 C1orf196B1AJZ1 125 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 C5orf58C9J3I9 102 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 SDCBPO00560 298 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 NPFFO15130 113 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR10J4P0C629 311 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 RNASE4P34096 147 aaKnown RBP1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 DNAJB13P59910 316 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 EMX2Q04743 252 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR8B8Q15620 311 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 CCDC153Q494R4 210 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 LYRM7Q5U5X0 104 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 PDZD9Q8IXQ8 264 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 HIST3H2BBQ8N257 126 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 MALSU1Q96EH3 234 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 CCDC115Q96NT0 180 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 TMEM138Q9NPI0 162 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 SLC39A9Q9NUM3 307 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 NOP16Q9Y3C1 178 aaKnown RBP1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 EXPH5Q8NEV8 1989 aa1.55□□□□□ -2.16
HMGB1P1-201ENST00000522557 TENM1Q9UKZ4 2725 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 IGKV1D-42A0A075B6H8 117 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 TRBV19A0A075B6N1 114 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 LCE6AA0A183 80 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 A0A1B0GWA3 101 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 H3BUX3 64 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms