RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 WFDC2Q14508 124 aa12.54□□□□□ -0.4
USP42-207ENST00000521713 C17orf77Q96MU5 243 aa12.54□□□□□ -0.4
USP42-207ENST00000521713 IGLV2-23P01705 113 aa12.54□□□□□ -0.4
USP42-207ENST00000521713 BAALC-AS2P0C853 105 aa12.54□□□□□ -0.4
USP42-207ENST00000521713 C16orf54Q6UWD8 224 aa12.54□□□□□ -0.4
USP42-207ENST00000521713 CRLF1O75462 422 aa12.53□□□□□ -0.4
USP42-207ENST00000521713 HERV-K104P63124 156 aa12.53□□□□□ -0.4
USP42-207ENST00000521713 IGHV4OR15-8A0A075B7B6 117 aa12.53□□□□□ -0.4
USP42-207ENST00000521713 A0A087WW49 117 aa12.53□□□□□ -0.4
USP42-207ENST00000521713 BUB3O43684 328 aa12.53□□□□□ -0.4
USP42-207ENST00000521713 ODF3L1Q8IXM7 274 aa12.53□□□□□ -0.4
USP42-207ENST00000521713 ZNF106Q9H2Y7 1883 aaKnown RBP12.53□□□□□ -0.4
USP42-207ENST00000521713 LINC01620Q4KN68 170 aa12.53□□□□□ -0.4
USP42-207ENST00000521713 TEX22C9J3V5 150 aa12.52□□□□□ -0.4
USP42-207ENST00000521713 FXYD2P54710 66 aa12.52□□□□□ -0.4
USP42-207ENST00000521713 PIFOQ8TCI5 191 aa12.52□□□□□ -0.4
USP42-207ENST00000521713 SPATA12Q7Z6I5 190 aa12.52□□□□□ -0.4
USP42-207ENST00000521713 LINC00574Q9H8X3 128 aa12.52□□□□□ -0.41
USP42-207ENST00000521713 H3BT86 120 aa12.52□□□□□ -0.41
USP42-207ENST00000521713 EGR2P11161 476 aaPredicted RBP12.52□□□□□ -0.41
USP42-207ENST00000521713 C2orf70A6NJV1 201 aa12.51□□□□□ -0.41
USP42-207ENST00000521713 TRAV26-1A0A087WT03 109 aa12.51□□□□□ -0.41
USP42-207ENST00000521713 NOP10Q9NPE3 64 aaKnown RBP12.51□□□□□ -0.41
USP42-207ENST00000521713 H0YGX0 51 aa12.51□□□□□ -0.41
USP42-207ENST00000521713 U3KQE9 123 aa12.51□□□□□ -0.41
USP42-207ENST00000521713 NCOA6Q14686 2063 aaPredicted RBP12.51□□□□□ -0.41
USP42-207ENST00000521713 DENND4AQ7Z401 1863 aa12.51□□□□□ -0.41
USP42-207ENST00000521713 ORMDL1Q9P0S3 153 aa12.51□□□□□ -0.41
USP42-207ENST00000521713 EML6Q6ZMW3 1958 aa12.51□□□□□ -0.41
USP42-207ENST00000521713 INSL3P51460 131 aa12.5□□□□□ -0.41
USP42-207ENST00000521713 LINC00173Q6ZV60 143 aa12.5□□□□□ -0.41
USP42-207ENST00000521713 C4orf3Q8WVX3 66 aa12.5□□□□□ -0.41
USP42-207ENST00000521713 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
USP42-207ENST00000521713 DNAJC9-AS1A6NH13 148 aa12.5□□□□□ -0.41
USP42-207ENST00000521713 KIAA1549LQ6ZVL6 1849 aa12.5□□□□□ -0.41
USP42-207ENST00000521713 CGB3P0DN86 165 aa12.49□□□□□ -0.41
USP42-207ENST00000521713 CGB7P0DN87 165 aa12.49□□□□□ -0.41
USP42-207ENST00000521713 NAV3Q8IVL0 2385 aa12.49□□□□□ -0.41
USP42-207ENST00000521713 NCKAP5O14513 1909 aa12.49□□□□□ -0.41
USP42-207ENST00000521713 ODF3BA8MYP8 253 aa12.49□□□□□ -0.41
USP42-207ENST00000521713 SPART-AS1P0CW21 52 aa12.49□□□□□ -0.41
USP42-207ENST00000521713 IGHV4-31P0DP07 118 aa12.49□□□□□ -0.41
USP42-207ENST00000521713 PFN2P35080 140 aa12.49□□□□□ -0.41
USP42-207ENST00000521713 C22orf34Q6ZV56 151 aa12.49□□□□□ -0.41
USP42-207ENST00000521713 TRBV6-1A0A0K0K1D8 114 aa12.49□□□□□ -0.41
USP42-207ENST00000521713 C16orf74Q96GX8 76 aa12.48□□□□□ -0.41
USP42-207ENST00000521713 IGHV3-38A0A0C4DH36 116 aa12.48□□□□□ -0.41
USP42-207ENST00000521713 FAM236AA0A1B0GUQ0 79 aa12.48□□□□□ -0.41
USP42-207ENST00000521713 FAM236BA0A1B0GV22 79 aa12.48□□□□□ -0.41
USP42-207ENST00000521713 WFDC11Q8NEX6 87 aa12.48□□□□□ -0.41
USP42-207ENST00000521713 ICOSQ9Y6W8 199 aa12.48□□□□□ -0.41
USP42-207ENST00000521713 TRBV10-2A0A0K0K1G8 114 aa12.48□□□□□ -0.41
USP42-207ENST00000521713 H3BQ85 93 aa12.48□□□□□ -0.41
USP42-207ENST00000521713 C1orf43Q9BWL3 253 aa12.48□□□□□ -0.41
USP42-207ENST00000521713 WI2-2373I1.2A0A1W2PRP0 233 aa12.47□□□□□ -0.41
USP42-207ENST00000521713 E9PLD3 99 aa12.47□□□□□ -0.41
USP42-207ENST00000521713 GNRH2O43555 120 aa12.47□□□□□ -0.41
USP42-207ENST00000521713 TLN1Q9Y490 2541 aaKnown RBP12.47□□□□□ -0.41
USP42-207ENST00000521713 PATE2Q6UY27 113 aa12.47□□□□□ -0.41
USP42-207ENST00000521713 A4D1N5 150 aa12.46□□□□□ -0.41
USP42-207ENST00000521713 C11orf1Q9H5F2 150 aa12.46□□□□□ -0.41
USP42-207ENST00000521713 ANGP03950 147 aaKnown RBP12.46□□□□□ -0.42
USP42-207ENST00000521713 CFHR4Q92496 578 aa12.45□□□□□ -0.42
USP42-207ENST00000521713 HIVEP3Q5T1R4 2406 aa12.45□□□□□ -0.42
USP42-207ENST00000521713 A0A1B0GX51 115 aa12.45□□□□□ -0.42
USP42-207ENST00000521713 TINCRA0A1B0GVN0 87 aa12.45□□□□□ -0.42
USP42-207ENST00000521713 IGLV2-14P01704 120 aa12.45□□□□□ -0.42
USP42-207ENST00000521713 C11orf71Q6IPW1 123 aa12.44□□□□□ -0.42
USP42-207ENST00000521713 MUC22E2RYF6 1773 aaPredicted RBP12.44□□□□□ -0.42
USP42-207ENST00000521713 MRPL23Q16540 153 aaKnown RBP12.44□□□□□ -0.42
USP42-207ENST00000521713 Q6YL49 198 aa12.44□□□□□ -0.42
USP42-207ENST00000521713 SLC25A29Q8N8R3 303 aa12.44□□□□□ -0.42
USP42-207ENST00000521713 ASPHD1Q5U4P2 390 aa12.44□□□□□ -0.42
USP42-207ENST00000521713 FAM167A-AS1Q96KT0 104 aa12.44□□□□□ -0.42
USP42-207ENST00000521713 PIEZO2Q9H5I5 2752 aa12.43□□□□□ -0.42
USP42-207ENST00000521713 GTSF1Q8WW33 167 aa12.43□□□□□ -0.42
USP42-207ENST00000521713 FANCD2OSQ96PS1 177 aa12.43□□□□□ -0.42
USP42-207ENST00000521713 MUSTN1Q8IVN3 82 aa12.43□□□□□ -0.42
USP42-207ENST00000521713 A0A096LPF7 62 aa12.43□□□□□ -0.42
USP42-207ENST00000521713 A0A0J9YY99 117 aa12.43□□□□□ -0.42
USP42-207ENST00000521713 SMAD5-AS1Q9Y6J3 95 aa12.43□□□□□ -0.42
USP42-207ENST00000521713 DYSFO75923 2080 aa12.43□□□□□ -0.42
USP42-207ENST00000521713 CTRLP40313 264 aa12.43□□□□□ -0.42
USP42-207ENST00000521713 Q9H8V8 135 aa12.43□□□□□ -0.42
USP42-207ENST00000521713 MED12LQ86YW9 2145 aa12.42□□□□□ -0.42
USP42-207ENST00000521713 SUMO4Q6EEV6 95 aa12.42□□□□□ -0.42
USP42-207ENST00000521713 TIMM17AQ99595 171 aa12.42□□□□□ -0.42
USP42-207ENST00000521713 ODF1Q14990 250 aa12.42□□□□□ -0.42
USP42-207ENST00000521713 WNK1Q9H4A3 2382 aa12.41□□□□□ -0.42
USP42-207ENST00000521713 DSCAMO60469 2012 aa12.41□□□□□ -0.42
USP42-207ENST00000521713 IGF1P05019 195 aa12.41□□□□□ -0.42
USP42-207ENST00000521713 TOMM6Q96B49 74 aa12.41□□□□□ -0.42
USP42-207ENST00000521713 C11orf86A6NJI1 115 aa12.4□□□□□ -0.42
USP42-207ENST00000521713 E7EUB6 86 aa12.4□□□□□ -0.42
USP42-207ENST00000521713 MED14OSP0DP75 135 aa12.4□□□□□ -0.42
USP42-207ENST00000521713 LINC00643Q86TS7 51 aa12.4□□□□□ -0.42
USP42-207ENST00000521713 NDUFA11Q86Y39 141 aa12.4□□□□□ -0.42
USP42-207ENST00000521713 PRR14LQ5THK1 2151 aa12.4□□□□□ -0.42
USP42-207ENST00000521713 ZFP2Q6ZN57 461 aa12.4□□□□□ -0.42
USP42-207ENST00000521713 Q6ZUT4 128 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms