RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SNHG12Q9BXW3 62 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 PRO3102Q9H379 93 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 CBLN4Q9NTU7 201 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 PXMP4Q9Y6I8 212 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 LY96Q9Y6Y9 160 aa1.57□□□□□ -2.16
HMGN1P28-201ENST00000521340 XIRP2A4UGR9 3374 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 TRGV10A0A0A0MS01 117 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 TRAV38-1A0A0B4J264 116 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 F2Z2F3 143 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 C17orf112F2Z3M2 114 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 HMGB3O15347 200 aaKnown RBP1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 PSCAO43653 123 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 NUPR1O60356 82 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 LY6HO94772 140 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 MT-ND6P03923 174 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR5G3P0C626 314 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 CBLN1P23435 193 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 GCHFRP30047 84 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 IDH3GP51553 393 aaPredicted RBP1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 RANP62826 216 aaKnown RBP1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 PLGLB1Q02325 96 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 SMIM21Q3B7S5 101 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 SPINK9Q5DT21 86 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 C1orf195Q5TG92 126 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 MIC13Q5XKP0 118 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 TOMM20LQ6UXN7 152 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF439Q8NDP4 499 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR11H1Q8NG94 326 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR4B1Q8NGF8 309 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 CMTM2Q8TAZ6 248 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 SLC25A40Q8TBP6 338 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 SFRP2Q96HF1 295 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR2J1Q9GZK6 312 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 SLC39A9Q9NUM3 307 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 FKBP11Q9NYL4 201 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 IL36BQ9NZH7 164 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 JPT1Q9UK76 154 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 TRAPPC2LQ9UL33 140 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 V9GYV3 84 aa1.56□□□□□ -2.16
HMGN1P28-201ENST00000521340 RP1L1Q8IWN7 2480 aaPredicted RBP1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 ANKHD1Q8IWZ3 2542 aaKnown RBP1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 GRIFINA4D1Z8 144 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 ODF3BA8MYP8 253 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 C3orf84H3BNL1 204 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 M0QZK8 103 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 M0R143 59 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 SLC17A3O00476 420 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 DLEU1O43261 78 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 APOMO95445 188 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 MT-CO2P00403 227 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 TFF1P04155 84 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 SAA2P0DJI9 122 aaPredicted RBP1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 BRS3P32247 399 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 CA7P43166 264 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 GABRA2P47869 451 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 EDDM3BP56851 147 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 TPPP2P59282 170 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 RHOBP62745 196 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 PRCDQ00LT1 54 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 AESQ08117 197 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 Q0VG73 95 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 RASL11AQ6T310 242 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 BRD3OSQ6XYD6 125 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF826PQ6ZT77 177 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 GPHB5Q86YW7 130 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 DEFB125Q8N687 156 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 SGMS2Q8NHU3 365 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZCCHC13Q8WW36 166 aaKnown RBP1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF714Q96N38 554 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 C20orf166-AS1Q96NR2 134 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 HSPB9Q9BQS6 159 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 MIEN1Q9BRT3 115 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 VAMP8Q9BV40 100 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 HIGD2AQ9BW72 106 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 MRPL32Q9BYC8 188 aaKnown RBP1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 COMMD5Q9GZQ3 224 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 OSTCQ9NRP0 149 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 TMEM14BQ9NUH8 114 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 TMEM106BQ9NUM4 274 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 IDI2-AS1Q9NZ38 188 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 RBM7Q9Y580 266 aaKnown RBP1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 BAHCC1Q9P281 2608 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 PTPRQQ9UMZ3 2332 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 TPRP12270 2363 aaKnown RBP1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 SPTBN1Q01082 2364 aaKnown RBP1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 HIVEP3Q5T1R4 2406 aa1.55□□□□□ -2.16
HMGN1P28-201ENST00000521340 WDR87Q6ZQQ6 2873 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 TRIOO75962 3097 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 ABCA4P78363 2273 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 IGLV3-9A0A075B6K5 115 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 TRGV5A0A0B4J1U4 118 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 TRAV3A0A0B4J244 114 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 IGHV1-18A0A0C4DH31 117 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 A0A1W2PRE2 83 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 SMIM27A0A1W2PRY6 76 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 LYZL6O75951 148 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 IGLC2P0DOY2 106 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 IGLC3P0DOY3 106 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms