RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 HIST1H2BLQ99880 126 aa2.48□□□□□ -2.01
VPS13B-208ENST00000521037 FAAP24Q9BTP7 215 aa2.48□□□□□ -2.01
VPS13B-208ENST00000521037 GFRA4Q9GZZ7 299 aa2.48□□□□□ -2.01
VPS13B-208ENST00000521037 SH3BGRL3Q9H299 93 aa2.48□□□□□ -2.01
VPS13B-208ENST00000521037 ST3GAL6Q9Y274 331 aa2.48□□□□□ -2.01
VPS13B-208ENST00000521037 SYNE2Q8WXH0 6885 aaKnown RBP2.47□□□□□ -2.01
VPS13B-208ENST00000521037 IGLV8-61A0A075B6I0 122 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 IGLV11-55A0A075B6I3 123 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 TGIF2-C20orf24A0A0A6YYL0 155 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 CTXND1A0A1B0GTU2 59 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 NDUFAF8A1L188 74 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 PLAC8L1A1L4L8 177 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 FAM24AA6NFZ4 105 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 OR4C46A6NHA9 309 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF727A8MUV8 499 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 C17orf112F2Z3M2 114 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 F6UZH7 168 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 M0R143 59 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 SYNGR2O43760 224 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 PDE6DO43924 150 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 YPEL1O60688 119 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 OR7C1O76099 320 aaPredicted RBP2.47□□□□□ -2.01
VPS13B-208ENST00000521037 HPRT1P00492 218 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 HRASP01112 189 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 PFN1P07737 140 aaKnown RBP2.47□□□□□ -2.01
VPS13B-208ENST00000521037 CXCL1P09341 107 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 SPART-AS1P0CW21 52 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 FABP4P15090 132 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 F2RP25116 425 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 OR10J1P30954 320 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 NUTF2P61970 127 aaKnown RBP2.47□□□□□ -2.01
VPS13B-208ENST00000521037 PAFAH1B2P68402 229 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 CCL20P78556 96 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 MEF2BQ02080 365 aaPredicted RBP2.47□□□□□ -2.01
VPS13B-208ENST00000521037 PRSS8Q16651 343 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 BSXQ3C1V8 233 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 SP6Q3SY56 376 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF880Q6PDB4 577 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 OR51G1Q8NGK1 321 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 OR4X1Q8NH49 305 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 SRSF12Q8WXF0 261 aaKnown RBP2.47□□□□□ -2.01
VPS13B-208ENST00000521037 EEF1AKMT3Q96AZ1 226 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 LINC00479Q96M42 142 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 YPEL2Q96QA6 119 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 TP53RKQ96S44 253 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 SMIM7Q9BQ49 75 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 KCNIP2Q9NS61 270 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 RPRMQ9NS64 109 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 TMEM14BQ9NUH8 114 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 SLC39A9Q9NUM3 307 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 GNG13Q9P2W3 67 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 SMPXQ9UHP9 88 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 WASHC3Q9Y3C0 194 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 CBY1Q9Y3M2 126 aa2.47□□□□□ -2.01
VPS13B-208ENST00000521037 IGHV3OR16-8A0A075B7F1 116 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 IGKV1D-13A0A0B4J2D9 117 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 A0A1B0GW15 77 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 TMEM30CPA0ZSE6 113 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 MAP1LC3B2A6NCE7 125 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 KNCNA6PVL3 124 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 CEBPZOSA8MTT3 80 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 TCAPO15273 167 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 PGLYRP1O75594 196 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-208ENST00000521037 CST7O76096 145 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 PRM2P04554 102 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 LINC00614P0C842 121 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 IGKV1-13P0DP09 117 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 GZMBP10144 247 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 ESDP10768 282 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 GALR1P47211 349 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 LGALS7P47929 136 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 CEBPGP53567 150 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 DEFB131AP59861 70 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 WFDC2Q14508 124 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 ACTL10Q5JWF8 245 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 C1orf194Q5T5A4 169 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 TMEM14EPQ6UXP3 125 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF818PQ6ZRF7 136 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 KRTAP7-1Q8IUC3 87 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF709Q8N972 641 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 OR10J5Q8NHC4 309 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 CIRBP-AS1Q8TBR5 109 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 MRPL30Q8TCC3 161 aaKnown RBP2.46□□□□□ -2.02
VPS13B-208ENST00000521037 C20orf144Q9BQM9 153 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 HDHD3Q9BSH5 251 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-208ENST00000521037 TMEM147Q9BVK8 224 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 MAP1LC3BQ9GZQ8 125 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 WDR61Q9GZS3 305 aaKnown RBP2.46□□□□□ -2.02
VPS13B-208ENST00000521037 PSENENQ9NZ42 101 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 Q9UF83 564 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 LY96Q9Y6Y9 160 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 URGCP-MRPS24S4R325 110 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 ARL2-SNX15V9GYD0 113 aa2.46□□□□□ -2.02
VPS13B-208ENST00000521037 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.02
VPS13B-208ENST00000521037 A0A1B0GV90 55 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 ZFP92A6NM28 416 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 H7C423 109 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 ITGB1BP1O14713 200 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF207O43670 478 aaKnown RBP2.45□□□□□ -2.02
VPS13B-208ENST00000521037 SERF1AO75920 110 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms