RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 TRBV10-1A0A0K0K1A3 114 aa8.2□□□□□ -1.1
SRGAP3-212ENST00000520860 C17orf112F2Z3M2 114 aa8.2□□□□□ -1.1
SRGAP3-212ENST00000520860 TCRBP04435 133 aa8.2□□□□□ -1.1
SRGAP3-212ENST00000520860 SMUG1Q53HV7 270 aa8.2□□□□□ -1.1
SRGAP3-212ENST00000520860 KRTAP26-1Q6PEX3 210 aa8.2□□□□□ -1.1
SRGAP3-212ENST00000520860 SERTM2A0A1B0GWG4 89 aa8.19□□□□□ -1.1
SRGAP3-212ENST00000520860 PTTG1O95997 202 aa8.19□□□□□ -1.1
SRGAP3-212ENST00000520860 MAJINQ3KP22 176 aa8.19□□□□□ -1.1
SRGAP3-212ENST00000520860 OR5C1Q8NGR4 320 aa8.19□□□□□ -1.1
SRGAP3-212ENST00000520860 PRR34Q9NV39 138 aa8.19□□□□□ -1.1
SRGAP3-212ENST00000520860 MUC2Q02817 5179 aa8.18□□□□□ -1.1
SRGAP3-212ENST00000520860 K7EQM0 130 aa8.18□□□□□ -1.1
SRGAP3-212ENST00000520860 NHLH2Q02577 135 aa8.18□□□□□ -1.1
SRGAP3-212ENST00000520860 RAB32Q13637 225 aa8.18□□□□□ -1.1
SRGAP3-212ENST00000520860 LINC00269Q8N2A0 174 aa8.18□□□□□ -1.1
SRGAP3-212ENST00000520860 LYPD6BQ8NI32 183 aa8.18□□□□□ -1.1
SRGAP3-212ENST00000520860 WDR61Q9GZS3 305 aaKnown RBP8.18□□□□□ -1.1
SRGAP3-212ENST00000520860 IL36BQ9NZH7 164 aa8.18□□□□□ -1.1
SRGAP3-212ENST00000520860 VAX2Q9UIW0 290 aa8.18□□□□□ -1.1
SRGAP3-212ENST00000520860 COX6A2Q02221 97 aa8.17□□□□□ -1.1
SRGAP3-212ENST00000520860 STPG4Q8N801 248 aa8.17□□□□□ -1.1
SRGAP3-212ENST00000520860 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.17□□□□□ -1.1
SRGAP3-212ENST00000520860 OR11H4Q8NGC9 324 aa8.17□□□□□ -1.1
SRGAP3-212ENST00000520860 PSG8Q9UQ74 426 aa8.17□□□□□ -1.1
SRGAP3-212ENST00000520860 IGLV10-54A0A075B6I4 117 aa8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 IGKV3D-20A0A0C4DH25 116 aa8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 IGKV2-24A0A0C4DH68 120 aa8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 FAM231BA6NCW3 169 aa8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 H3BVH4 76 aa8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 H7C1H1 209 aa8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 EIF3GO75821 320 aaKnown RBP eCLIP8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 SLPIP03973 132 aa8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 SRSF9Q13242 221 aaKnown RBP eCLIP8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 TRIQKQ629K1 86 aa8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 PQLC2Q6ZP29 291 aa8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 CCDC32Q9BV29 185 aa8.16□□□□□ -1.1
SRGAP3-212ENST00000520860 CENPXA8MT69 81 aa8.15□□□□□ -1.1
SRGAP3-212ENST00000520860 TCRAP04437 139 aa8.15□□□□□ -1.1
SRGAP3-212ENST00000520860 RBX1P62877 108 aa8.15□□□□□ -1.1
SRGAP3-212ENST00000520860 PRNTQ86SH4 94 aa8.15□□□□□ -1.1
SRGAP3-212ENST00000520860 C5orf17Q8NAS9 161 aa8.15□□□□□ -1.1
SRGAP3-212ENST00000520860 OR10G8Q8NGN5 311 aa8.15□□□□□ -1.1
SRGAP3-212ENST00000520860 SFRP2Q96HF1 295 aa8.15□□□□□ -1.1
SRGAP3-212ENST00000520860 MUC21A0A0G2JKD1 596 aa8.14□□□□□ -1.11
SRGAP3-212ENST00000520860 NDUFS6O75380 124 aaKnown RBP8.14□□□□□ -1.11
SRGAP3-212ENST00000520860 FLI1Q01543 452 aaPredicted RBP8.14□□□□□ -1.11
SRGAP3-212ENST00000520860 Q6ZRP5 223 aa8.14□□□□□ -1.11
SRGAP3-212ENST00000520860 B4DEV8 164 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 M0R381 172 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 IFNA7P01567 189 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 ARMS2P0C7Q2 107 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 BTCP35070 178 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 DEFA1P59665 94 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 DEFA3P59666 94 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 REG3AQ06141 175 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 GAGE6Q13070 117 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 IL15RAQ13261 267 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 TMEM97Q5BJF2 176 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 SAPCD1Q5SSQ6 148 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 PRSS3P2Q8NHM4 247 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 PHLDA3Q9Y5J5 127 aa8.13□□□□□ -1.11
SRGAP3-212ENST00000520860 TRAV8-4A0A0B4J246 113 aa8.12□□□□□ -1.11
SRGAP3-212ENST00000520860 TRAV26-2A0A0B4J265 109 aa8.12□□□□□ -1.11
SRGAP3-212ENST00000520860 A0A1W2PPV4 95 aa8.12□□□□□ -1.11
SRGAP3-212ENST00000520860 FABP5P3A8MUU1 101 aa8.12□□□□□ -1.11
SRGAP3-212ENST00000520860 P01737 135 aa8.12□□□□□ -1.11
SRGAP3-212ENST00000520860 GZMBP10144 247 aa8.12□□□□□ -1.11
SRGAP3-212ENST00000520860 TPT1P13693 172 aaKnown RBP8.11□□□□□ -1.11
SRGAP3-212ENST00000520860 RPS10P46783 165 aaKnown RBP8.11□□□□□ -1.11
SRGAP3-212ENST00000520860 ZNF664Q8N3J9 261 aa8.11□□□□□ -1.11
SRGAP3-212ENST00000520860 NEXN-AS1Q8NBZ9 246 aa8.11□□□□□ -1.11
SRGAP3-212ENST00000520860 SEC22CQ9BRL7 303 aa8.11□□□□□ -1.11
SRGAP3-212ENST00000520860 TRBV25-1A0A075B6N4 114 aa8.1□□□□□ -1.11
SRGAP3-212ENST00000520860 UPK1BO75841 260 aa8.1□□□□□ -1.11
SRGAP3-212ENST00000520860 RAB5CP51148 216 aa8.1□□□□□ -1.11
SRGAP3-212ENST00000520860 ZNF56Q15929 161 aa8.1□□□□□ -1.11
SRGAP3-212ENST00000520860 DNLZQ5SXM8 178 aa8.1□□□□□ -1.11
SRGAP3-212ENST00000520860 ZFP82Q8N141 532 aa8.1□□□□□ -1.11
SRGAP3-212ENST00000520860 SCGB1C1Q8TD33 95 aa8.1□□□□□ -1.11
SRGAP3-212ENST00000520860 PSORS1C2Q9UIG4 136 aa8.1□□□□□ -1.11
SRGAP3-212ENST00000520860 GRIFINA4D1Z8 144 aa8.09□□□□□ -1.11
SRGAP3-212ENST00000520860 M0R036 132 aa8.09□□□□□ -1.11
SRGAP3-212ENST00000520860 HMGB3O15347 200 aaKnown RBP8.09□□□□□ -1.11
SRGAP3-212ENST00000520860 RAB4BP61018 213 aa8.09□□□□□ -1.11
SRGAP3-212ENST00000520860 CACNG7P62955 275 aa8.09□□□□□ -1.11
SRGAP3-212ENST00000520860 PRR4Q16378 134 aa8.09□□□□□ -1.11
SRGAP3-212ENST00000520860 CFAP161Q6P656 301 aa8.09□□□□□ -1.11
SRGAP3-212ENST00000520860 NTM-AS1Q6ZSK4 140 aa8.09□□□□□ -1.11
SRGAP3-212ENST00000520860 LINC00474Q9P2X8 69 aa8.09□□□□□ -1.11
SRGAP3-212ENST00000520860 EPDR1Q9UM22 224 aa8.09□□□□□ -1.11
SRGAP3-212ENST00000520860 A0A096LNI7 61 aa8.08□□□□□ -1.12
SRGAP3-212ENST00000520860 IL7P13232 177 aa8.08□□□□□ -1.12
SRGAP3-212ENST00000520860 MZT2BQ6NZ67 158 aa8.08□□□□□ -1.12
SRGAP3-212ENST00000520860 DERL1Q9BUN8 251 aa8.08□□□□□ -1.12
SRGAP3-212ENST00000520860 TRAV6A0A075B6T7 132 aa8.07□□□□□ -1.12
SRGAP3-212ENST00000520860 KRBOX1C9JBD0 128 aa8.07□□□□□ -1.12
SRGAP3-212ENST00000520860 ARL14EPLP0DKL9 152 aa8.07□□□□□ -1.12
SRGAP3-212ENST00000520860 SUMO1P63165 101 aaKnown RBP8.07□□□□□ -1.12
SRGAP3-212ENST00000520860 RGS21Q2M5E4 152 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms