RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 UFSP1Q6NVU6 142 aa12.56□□□□□ -0.4
SDC2-205ENST00000520233 C14orf178Q8N769 122 aaPredicted RBP12.56□□□□□ -0.4
SDC2-205ENST00000520233 BTF3L4Q96K17 158 aa12.56□□□□□ -0.4
SDC2-205ENST00000520233 WWC2-AS2Q96NR7 200 aa12.56□□□□□ -0.4
SDC2-205ENST00000520233 COL7A1Q02388 2944 aa12.55□□□□□ -0.4
SDC2-205ENST00000520233 A0A087WWL8 130 aa12.55□□□□□ -0.4
SDC2-205ENST00000520233 SMIM17P0DL12 118 aa12.55□□□□□ -0.4
SDC2-205ENST00000520233 HTN3P15516 51 aa12.55□□□□□ -0.4
SDC2-205ENST00000520233 FHL2Q14192 279 aa12.55□□□□□ -0.4
SDC2-205ENST00000520233 SMIM15Q7Z3B0 74 aa12.55□□□□□ -0.4
SDC2-205ENST00000520233 ATP5L2Q7Z4Y8 100 aa12.55□□□□□ -0.4
SDC2-205ENST00000520233 KIF25-AS1Q9Y6Z4 181 aa12.55□□□□□ -0.4
SDC2-205ENST00000520233 URGCP-MRPS24S4R325 110 aa12.55□□□□□ -0.4
SDC2-205ENST00000520233 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
SDC2-205ENST00000520233 A0A1B0GXF2 115 aa12.54□□□□□ -0.4
SDC2-205ENST00000520233 F5H768 121 aa12.54□□□□□ -0.4
SDC2-205ENST00000520233 HOXA5P20719 270 aa12.54□□□□□ -0.4
SDC2-205ENST00000520233 EVI2AP22794 236 aa12.54□□□□□ -0.4
SDC2-205ENST00000520233 HBBP68871 147 aa12.54□□□□□ -0.4
SDC2-205ENST00000520233 FAM74A4Q5TZK3 123 aa12.54□□□□□ -0.4
SDC2-205ENST00000520233 MRPL54Q6P161 138 aaKnown RBP12.54□□□□□ -0.4
SDC2-205ENST00000520233 PHLDA1Q8WV24 401 aaPredicted RBP12.54□□□□□ -0.4
SDC2-205ENST00000520233 DPH3P1Q9H4G8 78 aa12.54□□□□□ -0.4
SDC2-205ENST00000520233 IGHV3-73A0A0B4J1V6 119 aa12.53□□□□□ -0.4
SDC2-205ENST00000520233 TRGV4A0A0C4DH28 118 aa12.53□□□□□ -0.4
SDC2-205ENST00000520233 S100A8P05109 93 aa12.53□□□□□ -0.4
SDC2-205ENST00000520233 SLAQ13239 276 aa12.53□□□□□ -0.4
SDC2-205ENST00000520233 TMEM191AQ9H0A3 160 aa12.53□□□□□ -0.4
SDC2-205ENST00000520233 GATA1P15976 413 aaPredicted RBP12.52□□□□□ -0.41
SDC2-205ENST00000520233 CAMPP49913 170 aa12.52□□□□□ -0.41
SDC2-205ENST00000520233 LINC00315P59091 139 aa12.52□□□□□ -0.41
SDC2-205ENST00000520233 SMCO4Q9NRQ5 59 aa12.52□□□□□ -0.41
SDC2-205ENST00000520233 TGP01266 2768 aa12.51□□□□□ -0.41
SDC2-205ENST00000520233 RASL11AQ6T310 242 aa12.51□□□□□ -0.41
SDC2-205ENST00000520233 GATD1Q8NB37 220 aa12.51□□□□□ -0.41
SDC2-205ENST00000520233 PRO0255Q9UI72 69 aa12.51□□□□□ -0.41
SDC2-205ENST00000520233 HHLA3Q9XRX5 114 aa12.51□□□□□ -0.41
SDC2-205ENST00000520233 RAB4BP61018 213 aa12.5□□□□□ -0.41
SDC2-205ENST00000520233 ELOBQ15370 118 aa12.5□□□□□ -0.41
SDC2-205ENST00000520233 ZNF56Q15929 161 aa12.5□□□□□ -0.41
SDC2-205ENST00000520233 MUC7Q8TAX7 377 aa12.5□□□□□ -0.41
SDC2-205ENST00000520233 TRBV6-4A0A1B0GX49 114 aa12.49□□□□□ -0.41
SDC2-205ENST00000520233 NUPR2A6NF83 97 aa12.49□□□□□ -0.41
SDC2-205ENST00000520233 MGPP08493 103 aa12.49□□□□□ -0.41
SDC2-205ENST00000520233 CRYBA4P53673 196 aa12.49□□□□□ -0.41
SDC2-205ENST00000520233 TMEM88Q6PEY1 159 aa12.49□□□□□ -0.41
SDC2-205ENST00000520233 CEMP1Q6PRD7 247 aaPredicted RBP12.49□□□□□ -0.41
SDC2-205ENST00000520233 Q6ZSN1 163 aa12.49□□□□□ -0.41
SDC2-205ENST00000520233 CBLN2Q8IUK8 224 aa12.49□□□□□ -0.41
SDC2-205ENST00000520233 F5H697 171 aa12.48□□□□□ -0.41
SDC2-205ENST00000520233 FAM210BQ96KR6 192 aa12.48□□□□□ -0.41
SDC2-205ENST00000520233 NACAE9PAV3 2078 aa12.48□□□□□ -0.41
SDC2-205ENST00000520233 TRBV24-1A0A075B6N3 115 aa12.47□□□□□ -0.41
SDC2-205ENST00000520233 TRAV26-1A0A087WT03 109 aa12.47□□□□□ -0.41
SDC2-205ENST00000520233 TGIF2-C20orf24A0A0A6YYL0 155 aa12.47□□□□□ -0.41
SDC2-205ENST00000520233 H3BNG1 76 aa12.47□□□□□ -0.41
SDC2-205ENST00000520233 FAM104BQ5XKR9 115 aa12.47□□□□□ -0.41
SDC2-205ENST00000520233 AMN1Q8IY45 258 aa12.47□□□□□ -0.41
SDC2-205ENST00000520233 SLC25A29Q8N8R3 303 aa12.47□□□□□ -0.41
SDC2-205ENST00000520233 RNF185Q96GF1 192 aa12.47□□□□□ -0.41
SDC2-205ENST00000520233 YPEL4Q96NS1 127 aa12.47□□□□□ -0.41
SDC2-205ENST00000520233 A0A0J9YY99 117 aa12.46□□□□□ -0.41
SDC2-205ENST00000520233 K7EQD1 137 aa12.46□□□□□ -0.41
SDC2-205ENST00000520233 PAX4O43316 350 aa12.46□□□□□ -0.41
SDC2-205ENST00000520233 RAB4AP20338 218 aa12.46□□□□□ -0.41
SDC2-205ENST00000520233 RHOHQ15669 191 aa12.46□□□□□ -0.41
SDC2-205ENST00000520233 COX19Q49B96 90 aa12.46□□□□□ -0.41
SDC2-205ENST00000520233 FRZBQ92765 325 aa12.46□□□□□ -0.41
SDC2-205ENST00000520233 VSIG2Q96IQ7 327 aa12.46□□□□□ -0.41
SDC2-205ENST00000520233 PRADC1Q9BSG0 188 aa12.46□□□□□ -0.41
SDC2-205ENST00000520233 SUMO4Q6EEV6 95 aa12.45□□□□□ -0.42
SDC2-205ENST00000520233 KLK5Q9Y337 293 aaPredicted RBP12.45□□□□□ -0.42
SDC2-205ENST00000520233 IGLL5B9A064 214 aa12.44□□□□□ -0.42
SDC2-205ENST00000520233 H7C1H1 209 aa12.44□□□□□ -0.42
SDC2-205ENST00000520233 SCO1O75880 301 aa12.44□□□□□ -0.42
SDC2-205ENST00000520233 ZFAND6Q6FIF0 208 aa12.44□□□□□ -0.42
SDC2-205ENST00000520233 TMEM136Q6ZRR5 245 aa12.44□□□□□ -0.42
SDC2-205ENST00000520233 GNB1LQ9BYB4 327 aa12.44□□□□□ -0.42
SDC2-205ENST00000520233 STAB2Q8WWQ8 2551 aa12.44□□□□□ -0.42
SDC2-205ENST00000520233 TRBV10-1A0A0K0K1A3 114 aa12.43□□□□□ -0.42
SDC2-205ENST00000520233 M0QY20 66 aa12.43□□□□□ -0.42
SDC2-205ENST00000520233 C15orf53Q8NAA6 179 aa12.43□□□□□ -0.42
SDC2-205ENST00000520233 MRAP2Q96G30 205 aa12.43□□□□□ -0.42
SDC2-205ENST00000520233 C3orf84H3BNL1 204 aa12.42□□□□□ -0.42
SDC2-205ENST00000520233 HLA-DQA1P01909 254 aa12.42□□□□□ -0.42
SDC2-205ENST00000520233 GYPEP15421 78 aa12.42□□□□□ -0.42
SDC2-205ENST00000520233 MRPL51Q4U2R6 128 aaKnown RBP12.42□□□□□ -0.42
SDC2-205ENST00000520233 TRAV26-2A0A0B4J265 109 aa12.41□□□□□ -0.42
SDC2-205ENST00000520233 LOC100131303A0A0U1RQF7 123 aa12.41□□□□□ -0.42
SDC2-205ENST00000520233 MT-ND6P03923 174 aa12.41□□□□□ -0.42
SDC2-205ENST00000520233 P0DMU3 169 aa12.41□□□□□ -0.42
SDC2-205ENST00000520233 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
SDC2-205ENST00000520233 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
SDC2-205ENST00000520233 TCTAP57738 103 aa12.41□□□□□ -0.42
SDC2-205ENST00000520233 ICOSQ9Y6W8 199 aa12.41□□□□□ -0.42
SDC2-205ENST00000520233 MRPL23Q16540 153 aaKnown RBP12.4□□□□□ -0.42
SDC2-205ENST00000520233 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.42
SDC2-205ENST00000520233 DNAJC30Q96LL9 226 aa12.4□□□□□ -0.42
SDC2-205ENST00000520233 NIT2Q9NQR4 276 aa12.4□□□□□ -0.42
SDC2-205ENST00000520233 Q9UF83 564 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms