RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 MRPL16Q9NX20 251 aaKnown RBP8.48□□□□□ -1.05
NUDCD1-203ENST00000519607 TRBV27A0A0K0K1C4 114 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 TMEM89A2RUT3 159 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 FAM74A4Q5TZK3 123 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 LYRM7Q5U5X0 104 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 ZNF688P0C7X2 276 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 COX6B1P14854 86 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 WFDC2Q14508 124 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 ZNF56Q15929 161 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 WFDC12Q8WWY7 111 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 JPT2Q9H910 190 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 PGPEP1Q9NXJ5 209 aa8.47□□□□□ -1.05
NUDCD1-203ENST00000519607 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.05
NUDCD1-203ENST00000519607 IGHV3-16A0A0C4DH30 117 aa8.46□□□□□ -1.05
NUDCD1-203ENST00000519607 DSCR9P59020 149 aa8.46□□□□□ -1.05
NUDCD1-203ENST00000519607 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.05
NUDCD1-203ENST00000519607 C9orf85Q96MD7 179 aa8.46□□□□□ -1.05
NUDCD1-203ENST00000519607 SPANXB1Q9NS25 103 aaPredicted RBP8.46□□□□□ -1.05
NUDCD1-203ENST00000519607 A0A0J9YX75 114 aa8.46□□□□□ -1.06
NUDCD1-203ENST00000519607 TSHBP01222 138 aa8.46□□□□□ -1.06
NUDCD1-203ENST00000519607 RPL39P62891 51 aaKnown RBP8.46□□□□□ -1.06
NUDCD1-203ENST00000519607 AMTNQ6UX39 209 aa8.46□□□□□ -1.06
NUDCD1-203ENST00000519607 TRPT1Q86TN4 253 aaKnown RBP8.46□□□□□ -1.06
NUDCD1-203ENST00000519607 RHOHQ15669 191 aa8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 KLHL30-AS1Q8NEE0 82 aa8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 ZNF256Q9Y2P7 627 aaPredicted RBP8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 SVEP1Q4LDE5 3571 aa8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 ACACBO00763 2458 aa8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 IGHV1OR15-1A0A075B7D0 117 aa8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 EDN2P20800 178 aa8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 TMEM95Q3KNT9 176 aa8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 ETDBQ3ZM63 59 aa8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 ZNF876PQ49A33 203 aa8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 MORN3Q6PF18 240 aaPredicted RBP8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 DLX4Q92988 240 aaPredicted RBP8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 PLEKHB2Q96CS7 222 aa8.45□□□□□ -1.06
NUDCD1-203ENST00000519607 K7EQG2 157 aa8.44□□□□□ -1.06
NUDCD1-203ENST00000519607 IGKV3-20P01619 116 aa8.44□□□□□ -1.06
NUDCD1-203ENST00000519607 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
NUDCD1-203ENST00000519607 UBE2D1P51668 147 aa8.44□□□□□ -1.06
NUDCD1-203ENST00000519607 EMP1P54849 157 aa8.44□□□□□ -1.06
NUDCD1-203ENST00000519607 Q8N1Y9 231 aa8.44□□□□□ -1.06
NUDCD1-203ENST00000519607 TRAV12-2A0A075B6T6 113 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 A0A0J9YY99 117 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 M0QY20 66 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 AVPP01185 164 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 NSUN5P1Q3KNT7 163 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 SIGMAR1Q99720 223 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 MDFICQ9P1T7 246 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 PKD1L2Q7Z442 2459 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 TRGV11A0A075B6L2 103 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 IGHV4-59P01825 116 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 DEFB104AQ8WTQ1 72 aa8.43□□□□□ -1.06
NUDCD1-203ENST00000519607 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 I3L3M4 83 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 APOMO95445 188 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 SPINK13Q1W4C9 94 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 DEFB112Q30KQ8 113 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 SH2D6Q7Z4S9 175 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 LINC01356Q8N9X3 169 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 GAGE12HA6NDE8 117 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 J3QQQ9 107 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 NFE4Q86UQ8 179 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 SLC25A29Q8N8R3 303 aa8.42□□□□□ -1.06
NUDCD1-203ENST00000519607 SCGB1A1P11684 91 aa8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 SYNJ2BPP57105 145 aa8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 NDUFA11Q86Y39 141 aa8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 ZNRF2Q8NHG8 242 aa8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 PRO0461Q9UI25 63 aa8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 TSSC4Q9Y5U2 329 aaPredicted RBP8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 CSPG4Q6UVK1 2322 aa8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 J3QLI3 93 aa8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 TSPAN13O95857 204 aa8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 ELANEP08246 267 aa8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 PSMB2P49721 201 aa8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 SPAG8Q99932 426 aaPredicted RBP8.41□□□□□ -1.06
NUDCD1-203ENST00000519607 TRBV20-1A0A075B6N2 111 aa8.4□□□□□ -1.06
NUDCD1-203ENST00000519607 C20orf203Q8NBC4 194 aa8.4□□□□□ -1.06
NUDCD1-203ENST00000519607 ATP6V0E2Q8NHE4 81 aa8.4□□□□□ -1.06
NUDCD1-203ENST00000519607 VCX2Q9H322 139 aa8.4□□□□□ -1.06
NUDCD1-203ENST00000519607 LEPROTO15243 131 aa8.4□□□□□ -1.07
NUDCD1-203ENST00000519607 IGHV3-30P01768 117 aa8.4□□□□□ -1.07
NUDCD1-203ENST00000519607 IGHV3-30-5P0DP03 117 aa8.4□□□□□ -1.07
NUDCD1-203ENST00000519607 SPG11Q96JI7 2443 aa8.39□□□□□ -1.07
NUDCD1-203ENST00000519607 AZU1P20160 251 aa8.39□□□□□ -1.07
NUDCD1-203ENST00000519607 UBE2D3P61077 147 aa8.39□□□□□ -1.07
NUDCD1-203ENST00000519607 UBE2D2P62837 147 aa8.39□□□□□ -1.07
NUDCD1-203ENST00000519607 CFAP126Q5VTH2 177 aa8.39□□□□□ -1.07
NUDCD1-203ENST00000519607 C10orf99Q6UWK7 81 aa8.39□□□□□ -1.07
NUDCD1-203ENST00000519607 MTURNQ8N3F0 131 aa8.39□□□□□ -1.07
NUDCD1-203ENST00000519607 RNF152Q8N8N0 203 aa8.39□□□□□ -1.07
NUDCD1-203ENST00000519607 UBE2E2Q96LR5 201 aa8.39□□□□□ -1.07
NUDCD1-203ENST00000519607 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
NUDCD1-203ENST00000519607 USP24Q9UPU5 2620 aa8.38□□□□□ -1.07
NUDCD1-203ENST00000519607 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
NUDCD1-203ENST00000519607 PRO1854Q9UHT4 67 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms