RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 LIMD2Q9BT23 127 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 TMEM242Q9NWH2 141 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 SPAG17Q6Q759 2223 aa1.17□□□□□ -2.22
PTPN12-213ENST00000519553 CTTNBP2Q8WZ74 1663 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 MAPKBP1O60336 1514 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 TRBV10-1A0A0K0K1A3 114 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 APOC4-APOC2K7ER74 178 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 IGKCP01834 107 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 APOC2P02655 101 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 PIPP12273 146 aaPredicted RBP1.16□□□□□ -2.22
PTPN12-213ENST00000519553 TPPP2P59282 170 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 C12orf73Q69YU5 71 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 UNQ5815/PRO19632Q6UWF5 114 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 ATG5Q9H1Y0 275 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 MRPL35Q9NZE8 188 aaKnown RBP1.16□□□□□ -2.22
PTPN12-213ENST00000519553 MRPL36Q9P0J6 103 aaKnown RBP1.16□□□□□ -2.22
PTPN12-213ENST00000519553 KTN1Q86UP2 1357 aaKnown RBP1.16□□□□□ -2.22
PTPN12-213ENST00000519553 PZPP20742 1482 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 SMARCA2P51531 1590 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 CACNA1BQ00975 2339 aa1.16□□□□□ -2.22
PTPN12-213ENST00000519553 CITO14578 2027 aa1.15□□□□□ -2.22
PTPN12-213ENST00000519553 TET1Q8NFU7 2136 aa1.15□□□□□ -2.23
PTPN12-213ENST00000519553 TRAV17A0A0B4J275 112 aa1.15□□□□□ -2.23
PTPN12-213ENST00000519553 KLF7O75840 302 aaPredicted RBP1.15□□□□□ -2.23
PTPN12-213ENST00000519553 SNAPC5O75971 98 aa1.15□□□□□ -2.23
PTPN12-213ENST00000519553 IL7P13232 177 aa1.15□□□□□ -2.23
PTPN12-213ENST00000519553 SPATA45Q537H7 98 aa1.15□□□□□ -2.23
PTPN12-213ENST00000519553 SLC48A1Q6P1K1 146 aa1.15□□□□□ -2.23
PTPN12-213ENST00000519553 NOTCH1P46531 2555 aa1.15□□□□□ -2.23
PTPN12-213ENST00000519553 FBN2P35556 2912 aa1.15□□□□□ -2.23
PTPN12-213ENST00000519553 ZFYVE16Q7Z3T8 1539 aa1.15□□□□□ -2.23
PTPN12-213ENST00000519553 CASP8AP2Q9UKL3 1982 aa1.14□□□□□ -2.23
PTPN12-213ENST00000519553 ZNF142P52746 1687 aaPredicted RBP1.14□□□□□ -2.23
PTPN12-213ENST00000519553 TRBV6-7A0A0A0MS04 114 aa1.14□□□□□ -2.23
PTPN12-213ENST00000519553 DNAL4O96015 105 aa1.14□□□□□ -2.23
PTPN12-213ENST00000519553 CATR1Q13166 79 aa1.14□□□□□ -2.23
PTPN12-213ENST00000519553 C9orf116Q5BN46 136 aaPredicted RBP1.14□□□□□ -2.23
PTPN12-213ENST00000519553 ZGRF1Q86YA3 2104 aa1.14□□□□□ -2.23
PTPN12-213ENST00000519553 SBSPONQ8IVN8 264 aa1.14□□□□□ -2.23
PTPN12-213ENST00000519553 Q8N8P6 123 aa1.14□□□□□ -2.23
PTPN12-213ENST00000519553 WFDC10AQ9H1F0 79 aa1.14□□□□□ -2.23
PTPN12-213ENST00000519553 NRKQ7Z2Y5 1582 aa1.13□□□□□ -2.23
PTPN12-213ENST00000519553 IFT140Q96RY7 1462 aa1.13□□□□□ -2.23
PTPN12-213ENST00000519553 HIGD1CA8MV81 97 aa1.13□□□□□ -2.23
PTPN12-213ENST00000519553 SNCGO76070 127 aa1.13□□□□□ -2.23
PTPN12-213ENST00000519553 S100A8P05109 93 aa1.13□□□□□ -2.23
PTPN12-213ENST00000519553 CBLN1P23435 193 aa1.13□□□□□ -2.23
PTPN12-213ENST00000519553 MRPL54Q6P161 138 aaKnown RBP1.13□□□□□ -2.23
PTPN12-213ENST00000519553 ACBD7Q8N6N7 88 aa1.13□□□□□ -2.23
PTPN12-213ENST00000519553 OBSCN-AS1Q96MR7 158 aa1.13□□□□□ -2.23
PTPN12-213ENST00000519553 AMELYQ99218 206 aa1.13□□□□□ -2.23
PTPN12-213ENST00000519553 PHRF1Q9P1Y6 1649 aaKnown RBP1.13□□□□□ -2.23
PTPN12-213ENST00000519553 CDK12Q9NYV4 1490 aaPredicted RBP1.12□□□□□ -2.23
PTPN12-213ENST00000519553 KDM6BO15054 1643 aa1.12□□□□□ -2.23
PTPN12-213ENST00000519553 ABCA4P78363 2273 aa1.12□□□□□ -2.23
PTPN12-213ENST00000519553 MUC22E2RYF6 1773 aaPredicted RBP1.12□□□□□ -2.23
PTPN12-213ENST00000519553 OOSP1A8MZH6 123 aa1.12□□□□□ -2.23
PTPN12-213ENST00000519553 CCKP06307 115 aa1.12□□□□□ -2.23
PTPN12-213ENST00000519553 RPL37AP61513 92 aaKnown RBP1.12□□□□□ -2.23
PTPN12-213ENST00000519553 NPC2P61916 151 aa1.12□□□□□ -2.23
PTPN12-213ENST00000519553 UBE2G1P62253 170 aa1.12□□□□□ -2.23
PTPN12-213ENST00000519553 HSD52Q0P140 79 aa1.12□□□□□ -2.23
PTPN12-213ENST00000519553 C9orf153Q5TBE3 101 aa1.12□□□□□ -2.23
PTPN12-213ENST00000519553 C8orf59Q8N0T1 100 aaPredicted RBP1.12□□□□□ -2.23
PTPN12-213ENST00000519553 TSKUQ8WUA8 353 aa1.12□□□□□ -2.23
PTPN12-213ENST00000519553 IFI27L1Q96BM0 104 aa1.12□□□□□ -2.23
PTPN12-213ENST00000519553 MRPL57Q9BQC6 102 aaKnown RBP1.12□□□□□ -2.23
PTPN12-213ENST00000519553 DLEC1Q9Y238 1755 aa1.11□□□□□ -2.23
PTPN12-213ENST00000519553 TRAV23DV6A0A075B6W5 121 aa1.11□□□□□ -2.23
PTPN12-213ENST00000519553 TRAV30A0A087WSZ9 112 aa1.11□□□□□ -2.23
PTPN12-213ENST00000519553 PIGBOS1A0A0B4J2F0 54 aa1.11□□□□□ -2.23
PTPN12-213ENST00000519553 NBDYA0A0U1RRE5 68 aa1.11□□□□□ -2.23
PTPN12-213ENST00000519553 TEX49A0A1B0GTD5 131 aa1.11□□□□□ -2.23
PTPN12-213ENST00000519553 TMEM218A2RU14 115 aa1.11□□□□□ -2.23
PTPN12-213ENST00000519553 IQCJQ1A5X6 159 aa1.11□□□□□ -2.23
PTPN12-213ENST00000519553 GTF2H5Q6ZYL4 71 aa1.11□□□□□ -2.23
PTPN12-213ENST00000519553 AHNAK2Q8IVF2 5795 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 BLMP54132 1417 aaPredicted RBP1.1□□□□□ -2.23
PTPN12-213ENST00000519553 CNTLNQ9NXG0 1405 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 TRAV12-3A0A0B4J271 114 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 TRBV10-3A0A0K0K1G6 114 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 A6NIN4 97 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 IFNA17P01571 189 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 PRB4P10163 310 aaPredicted RBP1.1□□□□□ -2.23
PTPN12-213ENST00000519553 IFITM1P13164 125 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 FXYD4P59646 89 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 CCL8P80075 99 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 RPL7L1Q6DKI1 246 aaKnown RBP1.1□□□□□ -2.23
PTPN12-213ENST00000519553 XAF1Q6GPH4 301 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 C4orf33Q8N1A6 199 aa1.1□□□□□ -2.23
PTPN12-213ENST00000519553 SNRNP200O75643 2136 aaKnown RBP1.1□□□□□ -2.23
PTPN12-213ENST00000519553 ASCC3Q8N3C0 2202 aaKnown RBP1.09□□□□□ -2.23
PTPN12-213ENST00000519553 TCRBV3S1A0A5B6 114 aa1.09□□□□□ -2.23
PTPN12-213ENST00000519553 TFF1P04155 84 aa1.09□□□□□ -2.23
PTPN12-213ENST00000519553 INSL4Q14641 139 aa1.09□□□□□ -2.23
PTPN12-213ENST00000519553 ZNF818PQ6ZRF7 136 aa1.09□□□□□ -2.23
PTPN12-213ENST00000519553 C5orf38Q86SI9 138 aa1.09□□□□□ -2.23
PTPN12-213ENST00000519553 SVBPQ8N300 66 aa1.09□□□□□ -2.23
PTPN12-213ENST00000519553 TTC9CQ8N5M4 171 aa1.09□□□□□ -2.23
PTPN12-213ENST00000519553 AQP10Q96PS8 301 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms