RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 EBI3Q14213 229 aa6.49□□□□□ -1.37
PCM1-212ENST00000519253 PRR30Q53SZ7 412 aaPredicted RBP6.49□□□□□ -1.37
PCM1-212ENST00000519253 KLK9Q9UKQ9 250 aa6.49□□□□□ -1.37
PCM1-212ENST00000519253 TNFRSF13BO14836 293 aaPredicted RBP6.49□□□□□ -1.37
PCM1-212ENST00000519253 GAS8-AS1O95177 125 aa6.49□□□□□ -1.37
PCM1-212ENST00000519253 Q71RC1 249 aaPredicted RBP6.49□□□□□ -1.37
PCM1-212ENST00000519253 ZFAND3Q9H8U3 227 aa6.49□□□□□ -1.37
PCM1-212ENST00000519253 COL6A6A6NMZ7 2263 aa6.49□□□□□ -1.37
PCM1-212ENST00000519253 C20orf203Q8NBC4 194 aa6.49□□□□□ -1.37
PCM1-212ENST00000519253 TMEM126AQ9H061 195 aa6.49□□□□□ -1.37
PCM1-212ENST00000519253 P0DMU3 169 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 FAM231AP0DMU4 169 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 FAM231CP0DMU5 169 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 XGP55808 180 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 EDA2RQ9HAV5 297 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 LINC00158P58513 81 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 CCDC140Q96MF4 163 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 HERVK_113P63121 156 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 TRAV12-2A0A075B6T6 113 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 UBE2D1P51668 147 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 CLUHP3Q96NS8 147 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 C11orf21Q9P2W6 132 aa6.48□□□□□ -1.37
PCM1-212ENST00000519253 TMEM86BQ8N661 226 aa6.47□□□□□ -1.37
PCM1-212ENST00000519253 PHLDA1Q8WV24 401 aaPredicted RBP6.47□□□□□ -1.37
PCM1-212ENST00000519253 TRAV13-1A0A0B4J241 112 aa6.47□□□□□ -1.37
PCM1-212ENST00000519253 ZNF625Q96I27 306 aaPredicted RBP6.47□□□□□ -1.37
PCM1-212ENST00000519253 IGHV3-33P01772 117 aa6.47□□□□□ -1.37
PCM1-212ENST00000519253 TNRC6BQ9UPQ9 1833 aaKnown RBP6.47□□□□□ -1.37
PCM1-212ENST00000519253 PIP4P2Q8N4L2 257 aa6.47□□□□□ -1.37
PCM1-212ENST00000519253 KNCNA6PVL3 124 aa6.47□□□□□ -1.37
PCM1-212ENST00000519253 IGHV3-30P01768 117 aa6.47□□□□□ -1.37
PCM1-212ENST00000519253 IGHV3-30-5P0DP03 117 aa6.47□□□□□ -1.37
PCM1-212ENST00000519253 INSP01308 110 aa6.46□□□□□ -1.37
PCM1-212ENST00000519253 ZFAND2AQ8N6M9 145 aa6.46□□□□□ -1.37
PCM1-212ENST00000519253 TRGV2A0A075B6R0 118 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 IGHV4OR15-8A0A075B7B6 117 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 A0A087WW49 117 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 C5orf56Q8N8D9 126 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 MDFICQ9P1T7 246 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 TRAV13-2A0A0B4J235 113 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 RNASE1P07998 156 aaKnown RBP6.46□□□□□ -1.38
PCM1-212ENST00000519253 SYNJ2BPP57105 145 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 NOTCH3Q9UM47 2321 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 IGHV3-30-3P0DP02 117 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 DNAJC30Q96LL9 226 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 TECTAO75443 2155 aa6.46□□□□□ -1.38
PCM1-212ENST00000519253 DOPEY2Q9Y3R5 2298 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 IGHV1-58A0A0C4DH39 117 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 K7EMT4 169 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 PAX4O43316 350 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 DEFB131AP59861 70 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 MRGPRG-AS1Q2M3A8 158 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 STHQ8IWL8 128 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 IGLV2-18A0A075B6J9 118 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 TRBV30A0A0K0K1B3 111 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 B4DSR2 109 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 UBE2D3P61077 147 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 UBE2D2P62837 147 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 PSMG3-AS1Q96PY0 264 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 SIRPDQ9H106 197 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 A0A0J9YXY3 114 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 K7ENP7 123 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 BAALC-AS2P0C853 105 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 SOCS3O14543 225 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 GHRHP01286 108 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 FBXL19-AS1Q494R0 122 aa6.45□□□□□ -1.38
PCM1-212ENST00000519253 TRGV1A0A0A0MS02 117 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 Q8N6K4 173 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 CEP192Q8TEP8 1941 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 NSUN5P1Q3KNT7 163 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 Q9H8V8 135 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 TRBV6-5A0A0K0K1A5 114 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 TRBV27A0A0K0K1C4 114 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 FAM236AA0A1B0GUQ0 79 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 FAM236BA0A1B0GV22 79 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 TMEM223A0PJW6 202 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 LGALS9O00182 355 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 ATP5G1P05496 136 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 ZNF22P17026 224 aaPredicted RBP6.44□□□□□ -1.38
PCM1-212ENST00000519253 HIST1H4AP62805 103 aaKnown RBP6.44□□□□□ -1.38
PCM1-212ENST00000519253 HERV-K104P63124 156 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 MIAQ16674 131 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 AJUBAQ96IF1 538 aa6.44□□□□□ -1.38
PCM1-212ENST00000519253 TEX49A0A1B0GTD5 131 aa6.43□□□□□ -1.38
PCM1-212ENST00000519253 RNASE13Q5GAN3 156 aaKnown RBP6.43□□□□□ -1.38
PCM1-212ENST00000519253 Q6Q795 121 aa6.43□□□□□ -1.38
PCM1-212ENST00000519253 GRNP28799 593 aaKnown RBP6.43□□□□□ -1.38
PCM1-212ENST00000519253 POLR2KP53803 58 aaKnown RBP6.43□□□□□ -1.38
PCM1-212ENST00000519253 UNQ9165/PRO28630Q6UXU0 137 aa6.43□□□□□ -1.38
PCM1-212ENST00000519253 LINC00643Q86TS7 51 aa6.43□□□□□ -1.38
PCM1-212ENST00000519253 NFE4Q86UQ8 179 aa6.43□□□□□ -1.38
PCM1-212ENST00000519253 JPT2Q9H910 190 aa6.43□□□□□ -1.38
PCM1-212ENST00000519253 ZFP36P26651 326 aaKnown RBP6.43□□□□□ -1.38
PCM1-212ENST00000519253 CHCHD5Q9BSY4 110 aa6.43□□□□□ -1.38
PCM1-212ENST00000519253 DSCR9P59020 149 aa6.43□□□□□ -1.38
PCM1-212ENST00000519253 DEFB1P60022 68 aa6.43□□□□□ -1.38
PCM1-212ENST00000519253 CFAP161Q6P656 301 aa6.43□□□□□ -1.38
PCM1-212ENST00000519253 TRACP01848 142 aa6.42□□□□□ -1.38
PCM1-212ENST00000519253 IGF1P05019 195 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms