RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 IGHV3-73A0A0B4J1V6 119 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 TMEM30CPA0ZSE6 113 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 K7EP13 123 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 NDUFA4O00483 81 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 DHFRP00374 187 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 APOA2P02652 100 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 IGKV1-16P04430 117 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 DEFA4P12838 97 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 MT1HP80294 61 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 KISS1Q15726 138 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 RPL39P5Q59GN2 51 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 TMEM97Q5BJF2 176 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 PSMG4Q5JS54 123 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 ZNF833PQ6ZTB9 187 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 WFDC10BQ8IUB3 73 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 OR1L8Q8NGR8 309 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 THEM6Q8WUY1 208 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 ANAPC10Q9UM13 185 aa2.51□□□□□ -2.01
HMGB1P23-201ENST00000518743 TMEM269A0A1B0GVZ9 245 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 AIPO00170 330 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 ORC5O43913 435 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 IGKV1-17P01599 117 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 GYPBP06028 91 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 CD5P06127 495 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 HRES1P13985 223 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 CRHBPP24387 322 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 RPL27AP46776 148 aaKnown RBP2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 RBP2P50120 134 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 RANP62826 216 aaKnown RBP2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 AKR1C1Q04828 323 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 KRTAP25-1Q3LHN0 102 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 PYDC2Q56P42 97 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 TMEM42Q69YG0 159 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 ZNF322Q6U7Q0 402 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 SPINK6Q6UWN8 80 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 ZNF664Q8N3J9 261 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 TTC9CQ8N5M4 171 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 LHFPL5Q8TAF8 219 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 IGF2BP2-AS1Q96M15 143 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 GPX7Q96SL4 187 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 CMSS1Q9BQ75 279 aaKnown RBP2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 XAGE1AQ9HD64 81 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 PSORS1C2Q9UIG4 136 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 TRAPPC2LQ9UL33 140 aa2.5□□□□□ -2.01
HMGB1P23-201ENST00000518743 TRAV14DV4A0A0A6YYC5 116 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 TRAV2A0A0B4J234 112 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 TMEM235A6NFC5 223 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 ZNF682O95780 498 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 RNASE2P10153 161 aaKnown RBP2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 TAS2R20P59543 309 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 CCDC153Q494R4 210 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 MORN2Q502X0 79 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 IDO2Q6ZQW0 420 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 STX19Q8N4C7 294 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 RAB2BQ8WUD1 216 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 TVP23CQ96ET8 276 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 CNBD2Q96M20 576 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 OR52B2Q96RD2 323 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 COMMD5Q9GZQ3 224 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 DOK5Q9P104 306 aa2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 RSL24D1Q9UHA3 163 aaKnown RBP2.49□□□□□ -2.01
HMGB1P23-201ENST00000518743 TGIF2-C20orf24A0A0A6YYL0 155 aa2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 H3BNG1 76 aa2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 COX7A2LO14548 114 aa2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 PRM2P04554 102 aa2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 UCHL1P09936 223 aa2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 HTN1P15515 57 aa2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 HIST1H1BP16401 226 aaKnown RBP2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 TAS2R30P59541 319 aa2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 IFITM2Q01629 132 aa2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 C10orf55Q5SWW7 151 aa2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 MRPL16Q9NX20 251 aaKnown RBP2.48□□□□□ -2.01
HMGB1P23-201ENST00000518743 H3BPC8 53 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 CREBL2O60519 120 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 NPYP01303 97 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 TTRP02766 147 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 CCL1P22362 96 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 SNRPD3P62318 126 aaKnown RBP2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 CNBPP62633 177 aaKnown RBP2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 CIRBPQ14011 172 aaKnown RBP2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 VMA21Q3ZAQ7 101 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 Q56UQ5 140 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 BCL2L15Q5TBC7 163 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 OR13C8Q8NGS7 320 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 OR4K15Q8NH41 348 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 MIEN1Q9BRT3 115 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 NOP10Q9NPE3 64 aaKnown RBP2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 SAMHD1Q9Y3Z3 626 aaKnown RBP2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 V9GYS6 101 aa2.47□□□□□ -2.01
HMGB1P23-201ENST00000518743 G3V3Q6 166 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 OR7C1O76099 320 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 GZMBP10144 247 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 ZNF22P17026 224 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 SPI1P17947 270 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 CRYBB3P26998 211 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 RBM11P57052 281 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms