RNA–Protein interactions for RNA: ENST00000517875.5

LRRCC1-203, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 2,385 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-203ENST00000517875 COX8CQ7Z4L0 72 aa13.19□□□□□ -0.3
LRRCC1-203ENST00000517875 ZNF575Q86XF7 245 aa13.19□□□□□ -0.3
LRRCC1-203ENST00000517875 C14orf178Q8N769 122 aaPredicted RBP13.19□□□□□ -0.3
LRRCC1-203ENST00000517875 C17orf77Q96MU5 243 aa13.19□□□□□ -0.3
LRRCC1-203ENST00000517875 KLK15Q9H2R5 256 aa13.19□□□□□ -0.3
LRRCC1-203ENST00000517875 TPSG1Q9NRR2 321 aa13.19□□□□□ -0.3
LRRCC1-203ENST00000517875 CDSNQ15517 529 aa13.18□□□□□ -0.3
LRRCC1-203ENST00000517875 CHD6Q8TD26 2715 aa13.18□□□□□ -0.3
LRRCC1-203ENST00000517875 CADP27708 2225 aa13.18□□□□□ -0.3
LRRCC1-203ENST00000517875 TMEM223A0PJW6 202 aa13.18□□□□□ -0.3
LRRCC1-203ENST00000517875 CCL8P80075 99 aa13.18□□□□□ -0.3
LRRCC1-203ENST00000517875 CXXC4Q9H2H0 198 aa13.18□□□□□ -0.3
LRRCC1-203ENST00000517875 FAM236DA0A1B0GTK5 79 aa13.17□□□□□ -0.3
LRRCC1-203ENST00000517875 FAM236CP0DP71 79 aa13.17□□□□□ -0.3
LRRCC1-203ENST00000517875 TSPEAR-AS2P59090 65 aa13.17□□□□□ -0.3
LRRCC1-203ENST00000517875 PLGLAQ15195 96 aa13.17□□□□□ -0.3
LRRCC1-203ENST00000517875 SERP2Q8N6R1 65 aa13.17□□□□□ -0.3
LRRCC1-203ENST00000517875 ZNF462Q96JM2 2506 aa13.17□□□□□ -0.3
LRRCC1-203ENST00000517875 RPL18AQ02543 176 aaKnown RBP13.17□□□□□ -0.3
LRRCC1-203ENST00000517875 CD177Q8N6Q3 437 aa13.17□□□□□ -0.3
LRRCC1-203ENST00000517875 FLNCQ14315 2725 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 M0R1B8 84 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 M0R3E3 92 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 ERCC8Q13216 396 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 MSMPQ1L6U9 139 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 NSUN5P1Q3KNT7 163 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 ORMDL2Q53FV1 153 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 ZNF843Q8N446 348 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 AMELXQ99217 191 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 KMT2BQ9UMN6 2715 aaPredicted RBP13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 CGB1A6NKQ9 187 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 PEMTQ9UBM1 199 aa13.16□□□□□ -0.3
LRRCC1-203ENST00000517875 NAV3Q8IVL0 2385 aa13.15□□□□□ -0.3
LRRCC1-203ENST00000517875 LYZP61626 148 aa13.15□□□□□ -0.3
LRRCC1-203ENST00000517875 LINC00311Q8N616 119 aa13.15□□□□□ -0.3
LRRCC1-203ENST00000517875 COL12A1Q99715 3063 aa13.15□□□□□ -0.3
LRRCC1-203ENST00000517875 SPRY2O43597 315 aa13.15□□□□□ -0.3
LRRCC1-203ENST00000517875 PSMG3-AS1Q96PY0 264 aa13.15□□□□□ -0.3
LRRCC1-203ENST00000517875 ICOSQ9Y6W8 199 aa13.15□□□□□ -0.3
LRRCC1-203ENST00000517875 C11orf86A6NJI1 115 aa13.14□□□□□ -0.31
LRRCC1-203ENST00000517875 GRNP28799 593 aaKnown RBP13.14□□□□□ -0.31
LRRCC1-203ENST00000517875 C1orf195Q5TG92 126 aa13.14□□□□□ -0.31
LRRCC1-203ENST00000517875 SMIM2Q9BVW6 85 aa13.14□□□□□ -0.31
LRRCC1-203ENST00000517875 SPTBN1Q01082 2364 aaKnown RBP13.14□□□□□ -0.31
LRRCC1-203ENST00000517875 TRAV26-2A0A0B4J265 109 aa13.14□□□□□ -0.31
LRRCC1-203ENST00000517875 LST1O00453 97 aa13.14□□□□□ -0.31
LRRCC1-203ENST00000517875 MUSTN1Q8IVN3 82 aa13.14□□□□□ -0.31
LRRCC1-203ENST00000517875 MYO18BQ8IUG5 2567 aa13.13□□□□□ -0.31
LRRCC1-203ENST00000517875 COX6CP09669 75 aa13.13□□□□□ -0.31
LRRCC1-203ENST00000517875 PAPPA-AS1Q5QFB9 102 aa13.13□□□□□ -0.31
LRRCC1-203ENST00000517875 ZNF80P51504 273 aaPredicted RBP13.13□□□□□ -0.31
LRRCC1-203ENST00000517875 C10orf55Q5SWW7 151 aa13.13□□□□□ -0.31
LRRCC1-203ENST00000517875 RHOHQ15669 191 aa13.12□□□□□ -0.31
LRRCC1-203ENST00000517875 PRIMA1Q86XR5 153 aa13.12□□□□□ -0.31
LRRCC1-203ENST00000517875 IGLV4-69A0A075B6H9 119 aa13.12□□□□□ -0.31
LRRCC1-203ENST00000517875 TRGV3P03979 118 aa13.12□□□□□ -0.31
LRRCC1-203ENST00000517875 FBXL19-AS1Q494R0 122 aa13.12□□□□□ -0.31
LRRCC1-203ENST00000517875 DCANP1Q8TF63 244 aa13.12□□□□□ -0.31
LRRCC1-203ENST00000517875 RNF125Q96EQ8 232 aa13.12□□□□□ -0.31
LRRCC1-203ENST00000517875 CLEC2BQ92478 149 aa13.11□□□□□ -0.31
LRRCC1-203ENST00000517875 RNASE6Q93091 150 aaKnown RBP13.11□□□□□ -0.31
LRRCC1-203ENST00000517875 PSMB8P28062 276 aa13.1□□□□□ -0.31
LRRCC1-203ENST00000517875 FAM216BQ8N7L0 139 aa13.1□□□□□ -0.31
LRRCC1-203ENST00000517875 EPM2AB3EWF7 344 aa13.1□□□□□ -0.31
LRRCC1-203ENST00000517875 C2orf66Q6UXQ4 117 aa13.1□□□□□ -0.31
LRRCC1-203ENST00000517875 LINC01560Q8TB33 94 aa13.1□□□□□ -0.31
LRRCC1-203ENST00000517875 C17orf58Q2M2W7 97 aa13.09□□□□□ -0.31
LRRCC1-203ENST00000517875 ICE1Q9Y2F5 2266 aa13.09□□□□□ -0.31
LRRCC1-203ENST00000517875 NDUFC2-KCTD14E9PQ53 114 aa13.09□□□□□ -0.31
LRRCC1-203ENST00000517875 CGB3P0DN86 165 aa13.09□□□□□ -0.31
LRRCC1-203ENST00000517875 CGB7P0DN87 165 aa13.09□□□□□ -0.31
LRRCC1-203ENST00000517875 UBE2E1P51965 193 aa13.09□□□□□ -0.31
LRRCC1-203ENST00000517875 NPC2P61916 151 aa13.09□□□□□ -0.31
LRRCC1-203ENST00000517875 ITLN2Q8WWU7 325 aaPredicted RBP13.09□□□□□ -0.31
LRRCC1-203ENST00000517875 PLCE1Q9P212 2302 aa13.09□□□□□ -0.31
LRRCC1-203ENST00000517875 LGALS3P17931 250 aaKnown RBP13.08□□□□□ -0.32
LRRCC1-203ENST00000517875 TMEM167AQ8TBQ9 72 aa13.08□□□□□ -0.32
LRRCC1-203ENST00000517875 TIMM21Q9BVV7 248 aa13.08□□□□□ -0.32
LRRCC1-203ENST00000517875 SPRY3O43610 288 aa13.07□□□□□ -0.32
LRRCC1-203ENST00000517875 PVRIGQ6DKI7 326 aa13.07□□□□□ -0.32
LRRCC1-203ENST00000517875 ROS1P08922 2347 aa13.07□□□□□ -0.32
LRRCC1-203ENST00000517875 ANKHD1Q8IWZ3 2542 aaKnown RBP13.07□□□□□ -0.32
LRRCC1-203ENST00000517875 FAM208BQ5VWN6 2430 aa13.07□□□□□ -0.32
LRRCC1-203ENST00000517875 IGKV2-40A0A087WW87 121 aaPredicted RBP13.07□□□□□ -0.32
LRRCC1-203ENST00000517875 TRAV8-3A0A0A6YYJ7 113 aa13.07□□□□□ -0.32
LRRCC1-203ENST00000517875 IGHV3-21A0A0B4J1V1 117 aa13.07□□□□□ -0.32
LRRCC1-203ENST00000517875 IGKV2D-40P01614 121 aaPredicted RBP13.07□□□□□ -0.32
LRRCC1-203ENST00000517875 DYNLRB1Q9NP97 96 aa13.07□□□□□ -0.32
LRRCC1-203ENST00000517875 IGLV3-9A0A075B6K5 115 aa13.06□□□□□ -0.32
LRRCC1-203ENST00000517875 SRRM5B3KS81 715 aa13.06□□□□□ -0.32
LRRCC1-203ENST00000517875 SYNJ2BPP57105 145 aa13.06□□□□□ -0.32
LRRCC1-203ENST00000517875 BSPH1Q075Z2 132 aa13.06□□□□□ -0.32
LRRCC1-203ENST00000517875 USP9XQ93008 2570 aaPredicted RBP13.06□□□□□ -0.32
LRRCC1-203ENST00000517875 SPTAN1Q13813 2472 aaKnown RBP13.06□□□□□ -0.32
LRRCC1-203ENST00000517875 IGKV1D-17A0A075B6S4 117 aa13.06□□□□□ -0.32
LRRCC1-203ENST00000517875 H3BRN7 92 aa13.06□□□□□ -0.32
LRRCC1-203ENST00000517875 AVPP01185 164 aa13.06□□□□□ -0.32
LRRCC1-203ENST00000517875 HCP5Q6MZN7 132 aa13.06□□□□□ -0.32
LRRCC1-203ENST00000517875 LRBAP50851 2863 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms