RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 Q8N8P6 123 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 CITED2Q99967 270 aaPredicted RBP8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 PKD1L2Q7Z442 2459 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 MRPL35Q9NZE8 188 aaKnown RBP8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 MSRB1Q9NZV6 116 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 LRRK2Q5S007 2527 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 CTSGP08311 255 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 ZFP36P26651 326 aaKnown RBP8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 S100A7L2Q5SY68 101 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 JPT2Q9H910 190 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 TSSC4Q9Y5U2 329 aaPredicted RBP8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 GATA1P15976 413 aaPredicted RBP8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 ZNRF2Q8NHG8 242 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 MGAQ8IWI9 3026 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 TANC2Q9HCD6 1990 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 IGLV1-47P01700 117 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 GATD1Q8NB37 220 aa8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 FASNP49327 2511 aaKnown RBP8.41□□□□□ -1.06
PCDHGA1-202ENST00000517417 CEND1Q8N111 149 aa8.4□□□□□ -1.06
PCDHGA1-202ENST00000517417 RASL10AQ92737 203 aa8.4□□□□□ -1.06
PCDHGA1-202ENST00000517417 PCSK5Q92824 1860 aa8.4□□□□□ -1.06
PCDHGA1-202ENST00000517417 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.06
PCDHGA1-202ENST00000517417 SLC25A20O43772 301 aa8.4□□□□□ -1.06
PCDHGA1-202ENST00000517417 FXYD2P54710 66 aa8.4□□□□□ -1.06
PCDHGA1-202ENST00000517417 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
PCDHGA1-202ENST00000517417 J3QLI3 93 aa8.4□□□□□ -1.07
PCDHGA1-202ENST00000517417 AZU1P20160 251 aa8.4□□□□□ -1.07
PCDHGA1-202ENST00000517417 HOXD3P31249 432 aaPredicted RBP8.4□□□□□ -1.07
PCDHGA1-202ENST00000517417 ELANEP08246 267 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 C2orf91Q6ZV80 131 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 SMIM2Q9BVW6 85 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 TEX48A0A1B0GUV7 120 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 K7EMI3 77 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 SPAG8Q99932 426 aaPredicted RBP8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 IGLV11-55A0A075B6I3 123 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 RHODO00212 210 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 Q8N9W7 124 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 CFHR4Q92496 578 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 VPREB3Q9UKI3 123 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 RNASE13Q5GAN3 156 aaKnown RBP8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 AMTNQ6UX39 209 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 ZNF493Q6ZR52 646 aa8.39□□□□□ -1.07
PCDHGA1-202ENST00000517417 MTORP42345 2549 aa8.38□□□□□ -1.07
PCDHGA1-202ENST00000517417 TRBV25-1A0A075B6N4 114 aa8.38□□□□□ -1.07
PCDHGA1-202ENST00000517417 F5H768 121 aa8.38□□□□□ -1.07
PCDHGA1-202ENST00000517417 H3BMG7 143 aa8.38□□□□□ -1.07
PCDHGA1-202ENST00000517417 IGLV2-11P01706 119 aa8.38□□□□□ -1.07
PCDHGA1-202ENST00000517417 AJUBAQ96IF1 538 aa8.38□□□□□ -1.07
PCDHGA1-202ENST00000517417 MYMXA0A1B0GTQ4 84 aa8.38□□□□□ -1.07
PCDHGA1-202ENST00000517417 G3V4G9 280 aa8.38□□□□□ -1.07
PCDHGA1-202ENST00000517417 I3L3M4 83 aa8.38□□□□□ -1.07
PCDHGA1-202ENST00000517417 PMVKQ15126 192 aa8.38□□□□□ -1.07
PCDHGA1-202ENST00000517417 A0A096LPF7 62 aa8.37□□□□□ -1.07
PCDHGA1-202ENST00000517417 DEFB1P60022 68 aa8.37□□□□□ -1.07
PCDHGA1-202ENST00000517417 ZNF48Q96MX3 618 aaPredicted RBP8.37□□□□□ -1.07
PCDHGA1-202ENST00000517417 DSCAMO60469 2012 aa8.37□□□□□ -1.07
PCDHGA1-202ENST00000517417 ARHGAP32A7KAX9 2087 aa8.37□□□□□ -1.07
PCDHGA1-202ENST00000517417 F8W1H4 67 aa8.37□□□□□ -1.07
PCDHGA1-202ENST00000517417 CRIP1P50238 77 aa8.37□□□□□ -1.07
PCDHGA1-202ENST00000517417 ATXN8Q156A1 80 aa8.37□□□□□ -1.07
PCDHGA1-202ENST00000517417 NPBQ8NG41 125 aa8.37□□□□□ -1.07
PCDHGA1-202ENST00000517417 TRAV8-3A0A0A6YYJ7 113 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 WI2-2373I1.2A0A1W2PRP0 233 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 BUB3O43684 328 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 GAGE12HA6NDE8 117 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 PFN2P35080 140 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 C12orf74Q32Q52 190 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 APRG1Q8IVJ8 170 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 DLX4Q92988 240 aaPredicted RBP8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 ZNF292O60281 2723 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 SLURP1P55000 103 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 C10orf105Q8TEF2 133 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 PRAC2D3DTV9 90 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 ATP6V0BQ99437 205 aa8.36□□□□□ -1.07
PCDHGA1-202ENST00000517417 GAGE6Q13070 117 aa8.35□□□□□ -1.07
PCDHGA1-202ENST00000517417 SPENQ96T58 3664 aaKnown RBP8.35□□□□□ -1.07
PCDHGA1-202ENST00000517417 DAD1P61803 113 aa8.35□□□□□ -1.07
PCDHGA1-202ENST00000517417 ODF1Q14990 250 aa8.35□□□□□ -1.07
PCDHGA1-202ENST00000517417 F8VRH5 84 aa8.35□□□□□ -1.07
PCDHGA1-202ENST00000517417 C2orf82Q6UX34 121 aa8.35□□□□□ -1.07
PCDHGA1-202ENST00000517417 IGLL5B9A064 214 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 FSTL3O95633 263 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 SS18Q15532 418 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 PRRC2AP48634 2157 aaKnown RBP8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 C9JAW5 83 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 ZNF80P51504 273 aaPredicted RBP8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 SH2D6Q7Z4S9 175 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 CRYGBP07316 175 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 TAL2Q16559 108 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 DEFB113Q30KQ7 82 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 ANAPC13Q9BS18 74 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 HIGD1BQ9P298 99 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 UBE2DNLQ8IWF7 75 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 C5orf56Q8N8D9 126 aa8.34□□□□□ -1.07
PCDHGA1-202ENST00000517417 COL27A1Q8IZC6 1860 aaPredicted RBP8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 H3BUA1 57 aa8.33□□□□□ -1.08
PCDHGA1-202ENST00000517417 CCL24O00175 119 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms