RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 RBFOX3A6NFN3 312 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 FAM74A7A6NL05 159 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 KRTAP29-1A8MX34 341 aaPredicted RBP9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 M0R036 132 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 PTTG1O95997 202 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 ARMS2P0C7Q2 107 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 TPT1P13693 172 aaKnown RBP9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 UBE2G2P60604 165 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 ZNF726P1Q15940 193 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 FAM162BQ5T6X4 162 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 FAM74A4Q5TZK3 123 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 RPL7L1Q6DKI1 246 aaKnown RBP9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 KCNIP4Q6PIL6 250 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 ZC2HC1AQ96GY0 325 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 SFRP2Q96HF1 295 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 FMC1Q96HJ9 113 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 TCEAL7Q9BRU2 100 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 Q9UF83 564 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 PHLDA3Q9Y5J5 127 aa9.61□□□□□ -0.87
SCARNA20.5-201ENST00000516991 DNAH8Q96JB1 4490 aa9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 IGKV2D-24A0A075B6R9 120 aa9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 RNF222A6NCQ9 220 aa9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 SH2D1AO60880 128 aa9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 UBE2G1P62253 170 aa9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 RPL36AP83881 106 aaKnown RBP9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 AKR1C8PQ5T2L2 129 aa9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 SCXQ7RTU7 201 aa9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 ZFP82Q8N141 532 aa9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 RPL36ALQ969Q0 106 aaKnown RBP9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 KLK12Q9UKR0 248 aa9.6□□□□□ -0.87
SCARNA20.5-201ENST00000516991 FXYD6-FXYD2A0A087WZ82 144 aa9.59□□□□□ -0.87
SCARNA20.5-201ENST00000516991 Q0VG73 95 aa9.59□□□□□ -0.87
SCARNA20.5-201ENST00000516991 LINC01559Q495D7 138 aa9.59□□□□□ -0.87
SCARNA20.5-201ENST00000516991 C14orf177Q52M58 125 aa9.59□□□□□ -0.87
SCARNA20.5-201ENST00000516991 A0A087WWL8 130 aa9.58□□□□□ -0.88
SCARNA20.5-201ENST00000516991 TRBV6-1A0A0K0K1D8 114 aa9.58□□□□□ -0.88
SCARNA20.5-201ENST00000516991 GRIFINA4D1Z8 144 aa9.58□□□□□ -0.88
SCARNA20.5-201ENST00000516991 M0R381 172 aa9.58□□□□□ -0.88
SCARNA20.5-201ENST00000516991 CRIP1P50238 77 aa9.58□□□□□ -0.88
SCARNA20.5-201ENST00000516991 ATRAIDQ6UW56 229 aa9.58□□□□□ -0.88
SCARNA20.5-201ENST00000516991 UBE2WQ96B02 151 aa9.58□□□□□ -0.88
SCARNA20.5-201ENST00000516991 CHAC1Q9BUX1 264 aa9.58□□□□□ -0.88
SCARNA20.5-201ENST00000516991 MAP1LC3B2A6NCE7 125 aa9.57□□□□□ -0.88
SCARNA20.5-201ENST00000516991 FHITP49789 147 aa9.57□□□□□ -0.88
SCARNA20.5-201ENST00000516991 UBE2D3P61077 147 aa9.57□□□□□ -0.88
SCARNA20.5-201ENST00000516991 UBE2D2P62837 147 aa9.57□□□□□ -0.88
SCARNA20.5-201ENST00000516991 ZNF674Q2M3X9 581 aa9.57□□□□□ -0.88
SCARNA20.5-201ENST00000516991 LINC01620Q4KN68 170 aa9.57□□□□□ -0.88
SCARNA20.5-201ENST00000516991 Q5BKY6 102 aa9.57□□□□□ -0.88
SCARNA20.5-201ENST00000516991 MAP1LC3BQ9GZQ8 125 aa9.57□□□□□ -0.88
SCARNA20.5-201ENST00000516991 TRBV7-3A0A075B6L6 115 aa9.56□□□□□ -0.88
SCARNA20.5-201ENST00000516991 LTAP01374 205 aa9.56□□□□□ -0.88
SCARNA20.5-201ENST00000516991 STOML3Q8TAV4 291 aa9.56□□□□□ -0.88
SCARNA20.5-201ENST00000516991 C1orf43Q9BWL3 253 aa9.56□□□□□ -0.88
SCARNA20.5-201ENST00000516991 TMSB15BA0A087X1C1 80 aa9.55□□□□□ -0.88
SCARNA20.5-201ENST00000516991 CRPP02741 224 aa9.55□□□□□ -0.88
SCARNA20.5-201ENST00000516991 AKR1C3P42330 323 aa9.55□□□□□ -0.88
SCARNA20.5-201ENST00000516991 PKIAP61925 76 aa9.55□□□□□ -0.88
SCARNA20.5-201ENST00000516991 OR10G8Q8NGN5 311 aa9.55□□□□□ -0.88
SCARNA20.5-201ENST00000516991 DNAJC30Q96LL9 226 aa9.55□□□□□ -0.88
SCARNA20.5-201ENST00000516991 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
SCARNA20.5-201ENST00000516991 IGLV2-8P01709 118 aa9.54□□□□□ -0.88
SCARNA20.5-201ENST00000516991 CXCL1P09341 107 aa9.54□□□□□ -0.88
SCARNA20.5-201ENST00000516991 RAB4BP61018 213 aa9.54□□□□□ -0.88
SCARNA20.5-201ENST00000516991 CST9LP1Q5W188 147 aa9.54□□□□□ -0.88
SCARNA20.5-201ENST00000516991 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.54□□□□□ -0.88
SCARNA20.5-201ENST00000516991 ZNF56Q15929 161 aa9.53□□□□□ -0.88
SCARNA20.5-201ENST00000516991 CIRBP-AS1Q8TBR5 109 aa9.53□□□□□ -0.88
SCARNA20.5-201ENST00000516991 BATF3Q9NR55 127 aa9.53□□□□□ -0.88
SCARNA20.5-201ENST00000516991 TMEM262E9PQX1 116 aa9.52□□□□□ -0.89
SCARNA20.5-201ENST00000516991 S100A9P06702 114 aaKnown RBP9.52□□□□□ -0.89
SCARNA20.5-201ENST00000516991 TMEM97Q5BJF2 176 aa9.52□□□□□ -0.89
SCARNA20.5-201ENST00000516991 OXTP01178 125 aa9.51□□□□□ -0.89
SCARNA20.5-201ENST00000516991 KRTAP10-4P60372 401 aaPredicted RBP9.51□□□□□ -0.89
SCARNA20.5-201ENST00000516991 SERTAD4-AS1Q5TG53 156 aa9.51□□□□□ -0.89
SCARNA20.5-201ENST00000516991 PRR27Q6MZM9 219 aa9.51□□□□□ -0.89
SCARNA20.5-201ENST00000516991 C15orf54Q8N8G6 183 aa9.51□□□□□ -0.89
SCARNA20.5-201ENST00000516991 ZNF471Q9BX82 626 aaPredicted RBP9.51□□□□□ -0.89
SCARNA20.5-201ENST00000516991 ANGP03950 147 aaKnown RBP9.5□□□□□ -0.89
SCARNA20.5-201ENST00000516991 MIAQ16674 131 aa9.5□□□□□ -0.89
SCARNA20.5-201ENST00000516991 MPV17L2Q567V2 206 aa9.5□□□□□ -0.89
SCARNA20.5-201ENST00000516991 ENHOQ6UWT2 76 aa9.5□□□□□ -0.89
SCARNA20.5-201ENST00000516991 NEXN-AS1Q8NBZ9 246 aa9.5□□□□□ -0.89
SCARNA20.5-201ENST00000516991 ARPC5O15511 151 aa9.49□□□□□ -0.89
SCARNA20.5-201ENST00000516991 SNAI2O43623 268 aa9.49□□□□□ -0.89
SCARNA20.5-201ENST00000516991 PAGE4O60829 102 aa9.49□□□□□ -0.89
SCARNA20.5-201ENST00000516991 PFDN1O60925 122 aa9.49□□□□□ -0.89
SCARNA20.5-201ENST00000516991 OR10AG1Q8NH19 301 aa9.49□□□□□ -0.89
SCARNA20.5-201ENST00000516991 CHCHD5Q9BSY4 110 aa9.49□□□□□ -0.89
SCARNA20.5-201ENST00000516991 CYTL1Q9NRR1 136 aa9.49□□□□□ -0.89
SCARNA20.5-201ENST00000516991 USP17L23D6RBM5 183 aa9.48□□□□□ -0.89
SCARNA20.5-201ENST00000516991 G3V3Q6 166 aa9.48□□□□□ -0.89
SCARNA20.5-201ENST00000516991 HLA-DQA1P01909 254 aa9.48□□□□□ -0.89
SCARNA20.5-201ENST00000516991 OR5AL1P0C617 328 aa9.48□□□□□ -0.89
SCARNA20.5-201ENST00000516991 SPANXN1Q5VSR9 72 aa9.48□□□□□ -0.89
SCARNA20.5-201ENST00000516991 UMAD1C9J7I0 102 aa9.47□□□□□ -0.89
SCARNA20.5-201ENST00000516991 RPL19P84098 196 aaKnown RBP9.47□□□□□ -0.89
SCARNA20.5-201ENST00000516991 DGAT2L7PQ6IED9 249 aa9.47□□□□□ -0.89
SCARNA20.5-201ENST00000516991 BAGE2Q86Y30 109 aa9.47□□□□□ -0.89
SCARNA20.5-201ENST00000516991 AP1S3Q96PC3 154 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms