RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 BORCS7Q96B45 105 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 CFAP53Q96M91 514 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 PRELID3AQ96N28 172 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 SPRR4Q96PI1 79 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 CIB3Q96Q77 187 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 LINC00467Q9BRT7 94 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 BPESC1Q9GZL8 116 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 IMUPQ9GZP8 106 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 SLC35B3Q9H1N7 401 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 BOLA2Q9H3K6 86 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 NMNAT1Q9HAN9 279 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 TP53AIP1Q9HCN2 124 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 ENY2Q9NPA8 101 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 C19orf12Q9NSK7 152 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 LYRM2Q9NU23 88 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 FGFR1OP2Q9NVK5 253 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 NHP2Q9NX24 153 aaKnown RBP-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 USE1Q9NZ43 259 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 METTL1Q9UBP6 276 aaKnown RBP-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 LAMTOR3Q9UHA4 124 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 FAM32AQ9Y421 112 aaKnown RBP-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 LY96Q9Y6Y9 160 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 BCORL1Q5H9F3 1711 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 CAMSAP2Q08AD1 1489 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 IQSEC2Q5JU85 1478 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 SPTBN2O15020 2390 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 TET3O43151 1660 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 ZNF142P52746 1687 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 PBRM1Q86U86 1689 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 RIMS1Q86UR5 1692 aaKnown RBP-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 LRRK2Q5S007 2527 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 OVOS2A0A0G2JMS6 1433 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 ZNF609O15014 1411 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 KDM6AO15550 1401 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 TROQ12816 1431 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 NCOA3Q9Y6Q9 1424 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 KIAA0556O60303 1618 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 ECM29Q5VYK3 1845 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 ZNF236Q9UL36 1845 aa-0.31□□□□□ -2.46
SNORA40.12-201ENST00000516329 BOD1L1Q8NFC6 3051 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 PRUNE2Q8WUY3 3088 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 ARHGEF10O15013 1369 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 SPTA1P02549 2419 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 C2CD3Q4AC94 2353 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 IFT172Q9UG01 1749 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 DMDP11532 3685 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 PKD1L2Q7Z442 2459 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 OBSL1O75147 1896 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 ROBO1Q9Y6N7 1651 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 UHRF1BP1LA0JNW5 1464 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 ADGRL2O95490 1459 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 NKTRP30414 1462 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 PXDNQ92626 1479 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 TRAV36DV7A0A075B6V5 113 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 TRBV7-1A0A0A6YYK4 115 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 TRAV13-1A0A0B4J241 112 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 TRAV17A0A0B4J275 112 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 TMEM189A5PLL7 270 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 IFITM5A6NNB3 132 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 RIIAD1A6NNX1 92 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 HIGD1CA8MV81 97 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 TMEM14DPA8MWL7 114 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 C9JAW5 83 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 E7EQ34 232 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 C17orf112F2Z3M2 114 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 H3BMG7 143 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 CCDC179H3BU77 68 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 M0R2T5 61 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 M0R3E3 92 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 KPNA4O00629 521 aaPredicted RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 CETN3O15182 167 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 ARPC5O15511 151 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 CST8O60676 142 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 EDF1O60869 148 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 GGCTO75223 188 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 BANF1O75531 89 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 SULT1C4O75897 302 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 TRACP01848 142 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 TNNC2P02585 160 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 SMR3BP02814 79 aaPredicted RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 MT-ND6P03923 174 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 OR10J4P0C629 311 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 TSPAN19P0C672 248 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 OCM2P0CE71 109 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 IGLC6P0CF74 106 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 SAA1P0DJI8 122 aaPredicted RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 ACYP2P14621 99 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 OGNP20774 298 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 S100A4P26447 101 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 SRP14P37108 136 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 GTF2A1P52655 376 aaPredicted RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 MAGOHP61326 146 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 TFAMQ00059 246 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 HIST1H1AQ02539 215 aaPredicted RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 RHOHQ15669 191 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 VMA21Q3ZAQ7 101 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 CFAP126Q5VTH2 177 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 EIF5AL1Q6IS14 154 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 SPAG11AQ6PDA7 123 aa-0.32□□□□□ -2.46
SNORA40.12-201ENST00000516329 C2orf82Q6UX34 121 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms