RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 C10orf126Q8N4M7 172 aa8.71□□□□□ -1.02
CLCN3-210ENST00000515420 SAMD10Q9BYL1 202 aa8.71□□□□□ -1.02
CLCN3-210ENST00000515420 GTSF1LQ9H1H1 148 aa8.71□□□□□ -1.02
CLCN3-210ENST00000515420 PKHD1P08F94 4074 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 TRBV20OR9-2A0A075B6H5 130 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 C19orf71A6NCJ1 209 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 TMEM250H0YL14 139 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 NDUFS6O75380 124 aaKnown RBP8.7□□□□□ -1.02
CLCN3-210ENST00000515420 CRYGDP07320 174 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 EVI2AP22794 236 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 LINC00315P59091 139 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 RPS20P60866 119 aaKnown RBP8.7□□□□□ -1.02
CLCN3-210ENST00000515420 TNP2Q05952 138 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 LELP1Q5T871 98 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 Q6ZSN1 163 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 ATP6V0E2Q8NHE4 81 aa8.7□□□□□ -1.02
CLCN3-210ENST00000515420 DAZAP1Q96EP5 407 aaKnown RBP8.7□□□□□ -1.02
CLCN3-210ENST00000515420 TRAV8-6A0A0B4J262 113 aa8.69□□□□□ -1.02
CLCN3-210ENST00000515420 TRBV10-1A0A0K0K1A3 114 aa8.69□□□□□ -1.02
CLCN3-210ENST00000515420 XKRY2A2RUG3 117 aa8.69□□□□□ -1.02
CLCN3-210ENST00000515420 RAB19A4D1S5 217 aa8.69□□□□□ -1.02
CLCN3-210ENST00000515420 NKX2-5P52952 324 aaPredicted RBP8.69□□□□□ -1.02
CLCN3-210ENST00000515420 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
CLCN3-210ENST00000515420 FAM74A4Q5TZK3 123 aa8.69□□□□□ -1.02
CLCN3-210ENST00000515420 NFE4Q86UQ8 179 aa8.69□□□□□ -1.02
CLCN3-210ENST00000515420 OR10AG1Q8NH19 301 aa8.69□□□□□ -1.02
CLCN3-210ENST00000515420 A0A087WWL8 130 aa8.68□□□□□ -1.02
CLCN3-210ENST00000515420 IGHV3-38A0A0C4DH36 116 aa8.68□□□□□ -1.02
CLCN3-210ENST00000515420 RBFOX3A6NFN3 312 aa8.68□□□□□ -1.02
CLCN3-210ENST00000515420 P01737 135 aa8.68□□□□□ -1.02
CLCN3-210ENST00000515420 SPANXN1Q5VSR9 72 aa8.68□□□□□ -1.02
CLCN3-210ENST00000515420 Q6ZRN7 208 aaPredicted RBP8.68□□□□□ -1.02
CLCN3-210ENST00000515420 A0A087WWC5 75 aa8.67□□□□□ -1.02
CLCN3-210ENST00000515420 IGLC6P0CF74 106 aa8.67□□□□□ -1.02
CLCN3-210ENST00000515420 RAB4BP61018 213 aa8.67□□□□□ -1.02
CLCN3-210ENST00000515420 OR10J3Q5JRS4 329 aa8.67□□□□□ -1.02
CLCN3-210ENST00000515420 C14orf178Q8N769 122 aaPredicted RBP8.67□□□□□ -1.02
CLCN3-210ENST00000515420 OR2D3Q8NGH3 330 aa8.67□□□□□ -1.02
CLCN3-210ENST00000515420 MSRB1Q9NZV6 116 aa8.67□□□□□ -1.02
CLCN3-210ENST00000515420 PKD1P98161 4303 aa8.67□□□□□ -1.02
CLCN3-210ENST00000515420 LOC100996750A0A140TA64 210 aa8.66□□□□□ -1.02
CLCN3-210ENST00000515420 GAGE12JA6NER3 117 aa8.66□□□□□ -1.02
CLCN3-210ENST00000515420 F2Z2F3 143 aa8.66□□□□□ -1.02
CLCN3-210ENST00000515420 GAGE1Q13065 139 aa8.66□□□□□ -1.02
CLCN3-210ENST00000515420 GAGE4Q13068 117 aa8.66□□□□□ -1.02
CLCN3-210ENST00000515420 GAGE5Q13069 117 aa8.66□□□□□ -1.02
CLCN3-210ENST00000515420 GAGE13Q4V321 117 aa8.66□□□□□ -1.02
CLCN3-210ENST00000515420 FER1L6-AS1Q8NA97 138 aa8.66□□□□□ -1.02
CLCN3-210ENST00000515420 AP1S3Q96PC3 154 aa8.66□□□□□ -1.02
CLCN3-210ENST00000515420 KRTAP4-6Q9BYQ5 205 aa8.66□□□□□ -1.02
CLCN3-210ENST00000515420 CACNG7P62955 275 aa8.65□□□□□ -1.02
CLCN3-210ENST00000515420 RPL36AP83881 106 aaKnown RBP8.65□□□□□ -1.02
CLCN3-210ENST00000515420 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
CLCN3-210ENST00000515420 OR10G8Q8NGN5 311 aa8.65□□□□□ -1.02
CLCN3-210ENST00000515420 RPL36ALQ969Q0 106 aaKnown RBP8.65□□□□□ -1.02
CLCN3-210ENST00000515420 TRBV7-3A0A075B6L6 115 aa8.64□□□□□ -1.03
CLCN3-210ENST00000515420 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-210ENST00000515420 LAGE3Q14657 143 aa8.64□□□□□ -1.03
CLCN3-210ENST00000515420 ZNF56Q15929 161 aa8.64□□□□□ -1.03
CLCN3-210ENST00000515420 FAM210AQ96ND0 272 aa8.64□□□□□ -1.03
CLCN3-210ENST00000515420 Q9UF83 564 aa8.64□□□□□ -1.03
CLCN3-210ENST00000515420 IBA57-AS1B1ANH7 110 aa8.63□□□□□ -1.03
CLCN3-210ENST00000515420 SMIM17P0DL12 118 aa8.63□□□□□ -1.03
CLCN3-210ENST00000515420 ERVFC1-1P60608 527 aa8.63□□□□□ -1.03
CLCN3-210ENST00000515420 TOR2AQ5JU69 321 aa8.63□□□□□ -1.03
CLCN3-210ENST00000515420 WDR73Q6P4I2 378 aa8.63□□□□□ -1.03
CLCN3-210ENST00000515420 NUDT10Q8NFP7 164 aa8.63□□□□□ -1.03
CLCN3-210ENST00000515420 OCC1Q8TAD7 63 aa8.63□□□□□ -1.03
CLCN3-210ENST00000515420 NUDT11Q96G61 164 aa8.63□□□□□ -1.03
CLCN3-210ENST00000515420 EIF5A2Q9GZV4 153 aaKnown RBP8.63□□□□□ -1.03
CLCN3-210ENST00000515420 RPP21Q9H633 154 aaKnown RBP8.63□□□□□ -1.03
CLCN3-210ENST00000515420 KIF25-AS1Q9Y6Z4 181 aa8.63□□□□□ -1.03
CLCN3-210ENST00000515420 K7EN84 100 aa8.62□□□□□ -1.03
CLCN3-210ENST00000515420 GZMBP10144 247 aa8.62□□□□□ -1.03
CLCN3-210ENST00000515420 CTRLP40313 264 aa8.62□□□□□ -1.03
CLCN3-210ENST00000515420 UBE2D3P61077 147 aa8.62□□□□□ -1.03
CLCN3-210ENST00000515420 UBE2D2P62837 147 aa8.62□□□□□ -1.03
CLCN3-210ENST00000515420 FAM231DQ6ZW35 169 aa8.62□□□□□ -1.03
CLCN3-210ENST00000515420 NEXN-AS1Q8NBZ9 246 aa8.62□□□□□ -1.03
CLCN3-210ENST00000515420 CNFNQ9BYD5 112 aa8.62□□□□□ -1.03
CLCN3-210ENST00000515420 MUC21A0A0G2JKD1 596 aa8.61□□□□□ -1.03
CLCN3-210ENST00000515420 MUC21A0A140T8X8 626 aa8.61□□□□□ -1.03
CLCN3-210ENST00000515420 EREGO14944 169 aa8.61□□□□□ -1.03
CLCN3-210ENST00000515420 TRGC1P0CF51 173 aa8.61□□□□□ -1.03
CLCN3-210ENST00000515420 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-210ENST00000515420 CHCHD7Q9BUK0 85 aa8.61□□□□□ -1.03
CLCN3-210ENST00000515420 TPPP3Q9BW30 176 aa8.61□□□□□ -1.03
CLCN3-210ENST00000515420 DNAH11Q96DT5 4516 aa8.6□□□□□ -1.03
CLCN3-210ENST00000515420 C16orf90A8MZG2 172 aa8.6□□□□□ -1.03
CLCN3-210ENST00000515420 F5H697 171 aa8.6□□□□□ -1.03
CLCN3-210ENST00000515420 H7C1H1 209 aa8.6□□□□□ -1.03
CLCN3-210ENST00000515420 TEX261Q6UWH6 196 aa8.6□□□□□ -1.03
CLCN3-210ENST00000515420 LYZL1Q6UWQ5 148 aa8.6□□□□□ -1.03
CLCN3-210ENST00000515420 SPATA12Q7Z6I5 190 aa8.6□□□□□ -1.03
CLCN3-210ENST00000515420 SMIM7Q9BQ49 75 aa8.6□□□□□ -1.03
CLCN3-210ENST00000515420 RNASE7Q9H1E1 156 aaKnown RBP8.6□□□□□ -1.03
CLCN3-210ENST00000515420 TNFRSF18Q9Y5U5 241 aa8.6□□□□□ -1.03
CLCN3-210ENST00000515420 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
CLCN3-210ENST00000515420 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
CLCN3-210ENST00000515420 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms